Cyprinodon tularosa (White Sands pupfish): 119773898
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Entry
119773898 CDS
T07496
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119773898 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119773898 (smarca5)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119773898 (smarca5)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
119773898 (smarca5)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
119773898 (smarca5)
RSF complex
119773898 (smarca5)
WICH complex
119773898 (smarca5)
B-WICH complex
119773898 (smarca5)
NORC complex
119773898 (smarca5)
BRF complex
119773898 (smarca5)
NuRF complex (fruit fly)
119773898 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
119773898
NCBI-ProteinID:
XP_038127036
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MSESENCVEQREEAAEVEEAVGAEEKSDSSDAGKESSSEGGADGQDASSSSSSKTKDSTP
GYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSV
GDNRHRRTEQEEDEELLNESTKTTNVCTRFDESPSYVKTGKMRDYQIRGLNWLISLYENG
INGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAV
CLIGDREQRTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKS
KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQ
KLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSA
GKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNGGKMVVLDKLLPKMKEQ
GSRVLIFSQMTRMMDILEDYCMWKNYEYCRLDGQTPHEERQVSINAYNEPNSSKFIFMLS
TRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVYRFITENTVEERIV
ERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDAIL
ERGERKTMEMKEKLSSLGESTLRNFTMDTENTSVYTFEGEDYREKKKVITNWIEPPKRER
KANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGY
KVPRNPDVPNSAQVQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWSKRDFNQFIKANE
KWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIK
KALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIR
NSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKSSSAQKRKA
EGIPDGRGRRKKLKL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagtgaaaactgcgttgagcagcgggaagaggcagctgaagttgaagaagcc
gtgggagcggaggaaaagtcagactcttcagatgcaggaaaagaatcctcatcagagggt
ggtgctgatggacaagatgcgtcctcttcctcatcgtctaagactaaagattccactcca
ggatatgaggagaaagtgcaaacagaccgaaccaacagatttgagtatctattgaagcaa
acggagctgtttgcacatttcatccaaccagctgcacagaagacccccacctcccccctg
aagatgaaaccgggccgaccccggatcaagaaagatgagaagcagaacctgctctctgtg
ggagacaaccgacatcgtcgcactgagcaagaggaggatgaagagctgctcaacgagagc
acgaagaccaccaatgtgtgcactcgcttcgatgagtctccctcctatgtgaaaacgggg
aaaatgagggattaccaaatccgtggtctaaactggctcatttctttgtatgaaaatgga
atcaacggcatccttgcagacgagatgggactgggaaagaccctccagactatcgccctg
ctgggttacatgaagcactacagaaacatcccaggtcctcacatggtgctggtgcctaag
tccacgctttataactggatgaacgagttcaagcgatgggtgccctctctgcgcgcagtc
tgcctgattggagacagagagcagcggacggccctgatcagagacgtgctgctgccagga
gagtgggacgtctgcgtcacgtcttacgaaatgctcatcattgaaaaggcagtgttcaag
aagttcaactggaggtacctggtcatcgacgaagcccacaggatcaagaacgaaaagtcg
aagctgtcagaaatcgtgcgtgaatttaaaaccaccaaccggctgctgctgactgggacg
ccgcttcagaacaacctccacgagctctgggctctgctcaacttcttgctgccggacgtc
ttcaactcatcagaggattttgattcatggtttgacacaaacaactgcctgggtgaccag
aagctggtggagcgtcttcacactgttctgcgtcccttcctgcttcgtcgtatcaaagca
gatgtcgagaaaacgttgcttcccaagaaagagatcaagatctacgtgggtctgagcaag
atgcagcgcgagtggtacacaaagattctcatgaaggacatcgatatcctgaactctgct
ggcaaaatggacaagatgcgtctgctgaacgttctcatgcagctcaggaaatgctgcaac
cacccgtacctgttcgacggggcggagccaggcccgccctacactaccgacctccacctg
gtggtgaacggagggaaaatggtggttctggataagctgctgcccaagatgaaggaacag
ggttcccgtgttctcatcttcagccagatgacccggatgatggacatcctggaggactac
tgcatgtggaagaactacgagtattgccgtctggatggacagacgcctcatgaagagaga
caggtctctatcaacgcgtacaacgagccaaacagcagcaagttcattttcatgttgagc
accagggccggcggcctgggcatcaacctggccacagccgacgtcgtcatcctctacgac
tcggactggaacccccaggtggacctgcaggcgatggatcgagctcacaggattggtcag
cagaagcaagtgcgtgtgtatcgtttcatcacagagaacacggtggaagagaggatcgtg
gagcgggctgaaatgaagctacggctagactccatcgtcatccagcagggaaggctggtg
gatccgagtgcaaacaagttgggtaaggacgagatgctgtcgattatccgccacggcgcc
acgcacgtgttcgcctccaaggagagcgagatcacagacgacgacattgatgcaatcctg
gagcgcggtgaaagaaagactatggagatgaaggagaagctgtcatctctgggcgagagc
accctgaggaacttcaccatggacacggagaacaccagcgtctacacgtttgaaggagag
gactacagagagaagaagaaggtcatcaccaactggatcgagcctcccaaaagagagcgg
aaagccaactatgctgtggatgcgtacttcagagaagctctgcgggtcagtgagcccaaa
gcaccaaaggctcctcgtccaccgaagcagccaaacgttcaagacttccagttcttccct
ccacgtctgtttgagcttctggagaaagagatcctgttctacaggaagaccataggctac
aaggttccccggaacccagacgtccccaactctgcccaggtccaaaaagaagagcaggcc
aagatcgatgaggctgaagctctcaccgaggaggagctggaggagaaggagaatctgctg
cagcagggattcacaatttggagcaaacgtgacttcaaccagttcatcaaagccaatgag
aagtggggaagagatgatattgagaacattgccagagaagttgagggaaaaacccctgag
gaagtcatggagtattctgccgttttctgggagcgctgcaacgagctgcaggacatcgag
aagatcatggcccagatcgagagaggagaggctcggatccagagaaggatcagcatcaag
aaggctctggactcaaagatcggccgctacaaggctcccttccaccagctgaggatctcc
tacggcaccaacaagggcaagaactacacggaggaggaagaccgcttcctcatctgtatg
ctgcataagctggggttcgacaaggagagcgtgtacgacgagctccgccaatgcatccgt
aactcgccccagttccgcttcgactggttccttaaatccaggacggccatggagctgcag
aggcgatgcaacactctgatcacgctgatagagagagagaacatggagctggaagagaga
gagaaggccgagaagaagaagaggggaccaaagagcagctcggcgcagaaacgtaaagcg
gagggaatccctgacggccgaggacgcaggaaaaagctaaaattgtga
DBGET
integrated database retrieval system
