Cyprinodon tularosa (White Sands pupfish): 119773958
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Entry
119773958 CDS
T07496
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119773958 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119773958 (vps8)
Membrane trafficking [BR:
ctul04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119773958 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Clathrin
WD40_CDC20-Fz
TPR_Vps41
TPR_VPS8_2
zf-RING_Vps41
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-RING_11
zf-RING_5
zf-RING_2
Beta-prop_EML_2
ANAPC4_WD40
zf-C3H2C3
SLX1_C
Beta-prop_HPS5
WDR55
zf-rbx1
EIF3I
PHD_4
Motif
Other DBs
NCBI-GeneID:
119773958
NCBI-ProteinID:
XP_038127123
LinkDB
All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
MSQSPDSRSLLSASSQLNLMEVESIDDKEFDIPQVDTPPTLESILSQMEEEEEPFVLEDT
CILNTDNMDAQSCDTSSLASSDSGDPAHLKRHEHTQKPALFESALNLLPPISHNSMTSDR
KRRPLDQSAAVHGSVLRLSLLKGISAQMVAASDKVDAGLPTAIAMSGVIAVGTSHGLALV
FGKDTNQALRLCLGSKTTGAEFGAVSALSINHDCSRLLCGFAKGQITMWDLANGKLLRTI
TDAHPPGTAILHVKFTDDPTLAVCNDSGGSVFELTFRRVMGMRSCDSRCLFSGSKGEVCC
VEPLRTPPDLKDHPITCYSLLAMASLTKILVIGLKPSLNVWMTLPYTKSDPTSVPQLAWQ
FVPVQKTVNPVLAFCKGDTVHFLLVKKEESGTIHVIKQRQLHLSCDIISLNWINSCTLVL
LDSHEKLHVVDRPSQEVLETLDLEQVQLVYNSRHFKSLATGGNVSQALALVGEKACYQSL
SSHAGQIVCLGTKSAHIMSLRSWKERLDCFLKQEHFPEALSLAWSFHEGTAKAVVGLHAD
SQKRKAAISDKMVELLLQFAEFALKKCPDQGKVQVMEQHFQDMVPVLVDYCLLLHKADLL
FNQLYSRLLENTVAKGVFLESLESYIVANRLGHITTPVMKDLLAHYHDNGMMDSLERCIV
HLDVTSLDIQQVVQVCWDNQLYDAVIYIFNRGMNDYITPMEKLFSVIGPRVKEGRSLTGD
DVVMGNKLLVYISCCLAGRAYPIGDIPEDLVVQVKNQVFEFLIRLHSGDSSQKEEVFPFI
HTLLHFDTREFLNVLAMTFDDVQNDKQALEYQQRIVDILLQVMVDNPDFTPSQVGGLFTF
LARQLAKPNNTLFVNRNLFDQVLEFLCCPDDDSRHTERQQVLLELLQVGGVVQFNEERLF
TLAEKAKFYQICEFLYEKKHLYERIVDCYLRDPLRQSEIFSYIHNLMSMPGYSSEEKLKV
KQKVLQHMQELVSLCPAKLADLVTWHFADEVQSIISSLQDDQLLFQFLRCLLKPQEGSQP
ASLLPLDPELYELLLDLMCRFESQELLKFLQTSQHYRLDEAIQITQKYGCNEAKAYLLEK
KGDIHGAFACLLQTLKERLHVLSAEVSHDGEGAADRRDEEELDLTLMNVRNSLNQMILFC
HRNCQNLDQEQGKDLWFPLLDAMMASQKEVMGLKDKHVSDGLKEMTLKVLNCMSSFISLP
AIIQHILQDPVYGRGKLAEIQGLILGMLDTFTYEQTLLETTTSLLNHDLHWSLAHLRSVV
TRGLHPRQDCCNICLQHYKRKQDATEEIVVFSCGHLYHLQCLQQKDCGRGQSSELPQPWR
CYKCSSSHGGRGGASVEPSRSRSASLAQTRFSSGHQQKGGEAHGKKVLAAVTLDVQQELS
WDQLRGLYRGPSRLSILSEVSHGQGGERPGFLVPAQSGAENFHLKLAPPPLFEE
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtctccagacagcagaagccttttgtccgcttcttcgcagctcaacctcatg
gaagtagaatcgattgacgataaggagtttgacatcccccaagtggacacgcctcccacc
ctggagagcatcctcagtcagatggaggaagaggaggagccgtttgttttggaggacacg
tgcattttaaacacggacaacatggacgctcagtcctgtgacacgtcctccttggccagc
tcggacagcggagaccctgcgcacctcaaacggcatgaacacacacagaaacctgccctg
tttgaaagtgctctaaacctgcttccacccatcagccataacagtatgacctctgacaga
aagaggaggcctctggatcagagcgcggccgtccacggctcggtccttcgtctcagcctg
ctgaagggcatctctgcccagatggtcgctgcttcagacaaagtggacgccgggcttccc
accgccatagccatgtctggagttatcgctgtaggaacatctcatggtctcgccttggta
ttcggaaaagataccaaccaggctctgcggctgtgtctgggcagcaagacgacaggagca
gagttcggcgccgtgtccgctctcagcatcaaccacgactgctctcgtcttctgtgtgga
tttgctaaaggccagattaccatgtgggatctggctaacgggaagcttctgaggaccatc
acagacgcccatcctccaggaactgccatactgcatgtgaagttcacagacgacccgact
ctggcggtctgcaacgacagcggaggctccgtgtttgagctgacattcaggcgggtcatg
gggatgcgctcctgtgactcccggtgtctgttcagcggctctaaaggagaagtgtgctgc
gtggaacctctgcggacgcctccggacctcaaagaccatcccatcacctgctactctctg
ctcgccatggcctccctcaccaagatcctggtgattggactgaagcccagcctgaacgtc
tggatgacgctgccctacaccaagtcggacccgaccagtgtcccccagctggcctggcag
tttgttcccgtccagaagacggtcaaccccgtccttgccttctgtaaaggagacaccgtc
cacttcctcctggtgaagaaggaggagagcggcaccatccatgtgatcaaacaaagacaa
ctccacctgagctgtgacatcatcagtctgaactggatcaacagctgcaccttggtgctg
ctggacagccacgagaagctgcacgtcgtggaccggccctcgcaggaggttctggagact
ctggatctggagcaggtgcagctggtctacaacagtcgacacttcaaatcgttggcgacc
ggagggaacgtctctcaggctctggcgctggttggagaaaaagcctgctaccagtccctg
tccagccacgcgggccagatcgtctgtctgggcaccaagtcggctcacattatgtccctg
aggagctggaaggagcgcctggactgcttcctgaagcaggagcatttccctgaggctctg
tctctagcctggtccttccatgagggcactgccaaggctgtggtaggcctccatgcagac
tcacagaagaggaaggcagcaatcagtgacaagatggtagagcttctcctccagtttgca
gagttcgctctgaagaagtgtccggatcagggcaaagtccaggtcatggagcagcacttc
caggacatggtgccggttttggtggattactgcctcctgctgcacaaggcagacctgctg
ttcaaccagctctactcgcgcctgctggagaacacggtggctaagggagtcttcctggag
tccctggagtcttacatcgtggccaaccggctcggtcacatcaccacgcctgtaatgaag
gacctcttagcccactaccacgataacggcatgatggacagcctggagagatgcatcgtc
cacctggacgtgaccagcctggacatacagcaggtggtccaggtctgttgggacaaccag
ctctatgatgccgtgatctatattttcaaccgaggaatgaacgactacatcactccaatg
gagaaactcttttcagtgattggtcctagagtcaaagaggggaggagcctaacaggcgat
gatgtggtgatggggaataaactactggtttacatcagctgctgtctggctggaagggcg
tatccaatcggagacatccctgaagatctggttgttcaggtgaagaaccaggtgtttgag
ttcctgattcgtcttcattcaggcgactcttctcagaaggaggaggttttcccgtttatt
cacactctcctccattttgatactcgggaatttctcaatgtcttggctatgacgtttgat
gacgtccagaacgacaagcaggccttggagtaccagcagaggatcgtggacattttactt
caggtgatggtggacaaccctgacttcactccctcccaggttggcggtctcttcaccttc
ttggctcgccagctggccaaaccaaacaacacactgtttgtgaacaggaaccttttcgat
caggtcctggagttcctctgttgtccagatgatgattctcgtcacaccgaaaggcagcag
gttctgctggagctgctgcaggttgggggggtggtccagttcaatgaagaaagactcttc
actcttgcagagaaagccaagttctaccagatctgtgagttcctgtatgagaagaagcat
ctgtatgagcgcatcgtggactgctatctgagagaccctctgcgtcagtctgaaatcttc
agctacatccacaacctgatgtccatgccaggctacagctctgaagagaagctaaaggtc
aaacagaaggtgctgcagcacatgcaggagttggttagcctgtgtcctgctaagttagcc
gacctggtgacgtggcacttcgccgatgaggtgcaatccatcatctcttcgctgcaggac
gaccagctgctcttccagtttctccgctgccttctgaagcctcaggaagggtctcagccg
gcatcccttctgcctcttgaccctgaactctatgagcttctgctggacctgatgtgccgg
tttgaatcccaagagcttctgaagttcctgcaaacatctcagcattacagactagacgag
gctatacagataacgcagaagtacggctgtaatgaagccaaggcctacctcctggagaag
aagggagatatccatggagcgtttgcctgcttgctgcagaccctgaaggaaagactgcat
gtcctgtcagcagaggtgagccatgacggagaaggagcagctgacagacgggatgaagag
gagctggatttaacactgatgaatgtcaggaattcattgaaccaaatgattctcttctgt
catcggaactgtcagaacctggaccaagagcaaggaaaggacctgtggttcccactgctg
gacgccatgatggcctcacagaaggaagtgatgggactcaaggataaacacgtctcagat
ggtctgaaggagatgaccctgaaggtcctgaactgtatgagcagctttatttccctcccc
gccatcattcagcacatactgcaggaccccgtttatggacgaggaaagctggcggagatt
caggggctcattctggggatgttggacacctttacctatgaacagacgttgctggaaacg
acaacaagtctgctgaaccacgacctccactggtccttggctcatctccgctctgtcgtc
accagagggcttcatccacgacaagactgctgcaacatctgcctgcagcactacaagagg
aagcaggatgcgacggaggagatcgttgtgttcagctgtggccacctgtaccacctgcag
tgcctccagcagaaagactgtgggcggggccagagctccgagctgccacagccttggagg
tgctacaagtgttcttccagccatggaggaaggggcggggcttctgttgaacccagtagg
agccgcagcgcgtcactcgcccagactcgtttctcatcaggacatcagcagaaaggaggc
gaggcccacgggaagaaggtattggctgcagtgacgctggatgtgcagcaggagctgtcc
tgggatcagctccggggtttataccgaggaccatccaggctgtccatcctgtcagaggtg
tcacatggccaaggaggcgagaggccaggcttcctggttccggcccaatcgggggcggag
aatttccacctcaaactggctcctcctcctctgtttgaagagtag
DBGET
integrated database retrieval system
