Cyprinodon tularosa (White Sands pupfish): 119774030
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Entry
119774030 CDS
T07496
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04510
Focal adhesion
ctul04512
ECM-receptor interaction
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119774030 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119774030 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119774030 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
MINT_RAM7
DUF948
Motif
Other DBs
NCBI-GeneID:
119774030
NCBI-ProteinID:
XP_038127224
LinkDB
All DBs
Position
Unknown
AA seq
3180 aa
AA seq
DB search
MADITTNATCGENGPEMFCKLVEHVPGQPVRNPQCRICNQQSPNPVEHHPIEYAIDGTNR
WWQSPSIKNGMDYHYVTITLDLKQVFQVAYIIIKAANSPRPGNWILERSIDGVTFEPWQY
YAITDTECLTRFNINPRTGPPSYTRDDEVICTSFYSKIHPLENGEIHTSLINGRPSADDP
SPTLLNFTSARYIRLVFQRIRTLNADLMTLTLRDPKDIDFIVTRRYYYSIKDISVGGMCI
CYGHAKACPLNPDTKKFSCECEHNTCGESCDHCCPGYHQQPWMAGTFLTRHVCEKCNCHN
KAEECYFNQTVADLSLSLDIHGQYRGGGVCTGCRDNTAGINCQSCISGYYRPSTVSPDEE
DPCIPCSCDPHGSISQTCVADESQASPGQPAGSCWCKEGFGGLRCDRCAIGYMGYPNCEH
CNCSVEGSINSDPCVTPCICKEHVEGENCDRCKLGFYNLQGSNRRGCEKCFCMGIASQCS
SSTWNFGKVTTLAGWHLLGETGGRVWPVHRETPSYLTVRHSDIMNNLGSAYYWNAPEVYL
GNKISAYGGDVVFTVSYTTHEQEQGSIRVTSEPDLIIEGGGIKLIDKRFGQPVYPSSTST
KHIVLLPENFLVSEIEQPISRRDFLLVLANVTSLMVRASYSTEMSAVYRLNSFSMQVANS
SASGKIASAVEMCDCPPGYGGLSCETCLPGFRRVHGKLYNGVCEPCQCHGHSLHCHEFTG
NCLDCIHHTTGHQCDTCLPGYYGNATHGTPQDCQPCACPLTLPSNNFSPTCHLGEGGELL
CDRCQPGYTGPRCDRCSNGYYGQPNVPGESCQPCNCNGNLDLSVPDSCDPITGQCLRCRQ
GYEGLTCDTCSDGYYGDAITLKNCQPCHCHTNGSLSEVCDKETGQCQCRENVVGLQCDKC
KANWWWDVELQECMPCRCSPYGSTSQRCDTEGRCICRPGFVARRCNLRRLGYERRETRRP
IESLPIEAVQQRWGGTSRTSGGCPRGAYRPQTGAQTHGVTTGGVCVPCHCNSFGSKSFDC
DEMGQCRCQPGVTGPKCDRCSRGFFNFQEGGCTPCQCSHVGNNCDANTGQCICPPNTIGE
RCDRCAPNHWGHDITTGCKECGCNGIGSETQQCNVNTGCCKCRASFRGEKCDECQIGYRD
FPQCIPCECSIAGSDCETCDREKGVCACADRTGKCSCKENVEGHNCDQCKSETFGLSEKN
PLGCSKCYCYGLTRSCTEARGLIRMLLTLRPEQTVLPLVDKSNTVEKRTGVSFQHPEILV
HAELVAGTLSEPYYWRLPEQFTGSMITAYGGQLKYAVYYEARDETGPSSYEPQVIIKGGP
NHNILITRHIPGLQIGQLTRHDIDMTEHEWRYEDGRSMTREDFMDVLFYVDYILIKASHG
SLMRHSRISEISLTVAEEGTPTELNEKAHQIEKCDCPTGYSGLSCEECAAGFYRLRYGSL
VSVPASRVPTAAGMGSCVQCQCSGHSSTCDPETSICQNCQDNTEGDHCERCAPGFYGVIR
GSTDDCKPCACPLTNPENNFSPTCVAEGVDDFRCTACPEGYEGKYCERCATGYHGNPTMP
GGRCEESCDDECSGLLISDMDRLYRIITDVTLTTPLPPPYKVLYRFENMTDEIKHMLSPQ
KAPERLLQLADSNLGSLVVEMDQLHSRATKVSADGEQVDDDADRIHKRAQDLEQFIKDTL
LGAKDLQFKAAELNRTLSRKDGTADKSLTEMKEEIQAMLAEMRKRQLGGMKSIAEEEEDL
AEELYQKVKRLFGNPHQATEDLKAEIKEKLSDHERKLQEAEDLLHSAQGKTRQAGSLAEN
NKANLTLLQKKRDAVSGVKQDAQKILGEGNNLLDEANQLSDNINKELEELEGMERDLDPL
HAQLDDKVQGLADGLSDGSVAEKVGEAEEHAKQLNESAAILDGILAEAKNLSFNATAAVH
AYSNIKANIDAAEKEAKAAKQNANEALSLVLGPDVPVKEAAQIALQKSQILLNKAKQLQN
DVKENADNVAGLKGRVKAARDKTKGLLTAVNGTLATLNAMPNDTSYKLAATKAVAADANV
TAIDVLERLADLNLRLGNLQLNCSELEDTVDAANQMIQDPEKNTIIHAAGAKVKDLEDEA
DRLLEKLQPIKKLQDNLRRNISQIKELINQARKQANSIKVSVSSGGDCLRSYRPDIRKGR
YNTIILHVKTTTPDNLLFYLGSAKYVDFLALEMRKGKVNFLWDVGSGVGRVEYPHHTIYD
GNWYRIEASRNGLNGTISVYPLDGPMAGMMPTPASANSPTAYTILDVDQNAYLFVGGILS
TAKKAEAVKTSTFTGCMGETFLDGKPIGLWNYRDRQGDCKGCVVSPQRTDGEGTVQLDGE
GYAAVGRPTRWNPNVSTITLKFRTFSSDALLMYLATEDMKDFLSLELLEGKVRVNFDLGS
GVGSATSANRHNDGRWKALTMSRNKKQAVVIVVDISQGTEEKIVAISKGSATGLNLKENQ
KIYFGGLPTIGNYSMAARSEVILKRYAGCLKDIEVSRTPYNLLSSTDYTGVTKGCNVEKL
YTVSFSKPGYMELDGLSFAINTEISLSFSTLSDTGIILLAVGGTSPISKEPRRPNLNSKR
RRRQSGEPYLLVMLNKGSLEVLINTGSHTQRCVVRRPDQGNLNDGREHSLRIERLAGRSF
AVQVDEEPKREAGLPNDQPMRLRHIFLGGIPPEVERTSNRVNIPFKGCIWNLMVNSILSD
FSQPVSFENAEIGQCPNLAPPPPLPPLPEEEKTEEKKMDLKPLHPTVPPAPGTPPPSGPE
EATPPVPAAATPISPAAVATPTAKLDPIIDPDSCASAVAPTSLEKAYQFGLTRNSHMSFA
FDDTKVREKLLLEFELRTKELSGLVLYMARINHADFVSIQIKEGQACLGYDLGHGNISGC
VPFSINDGNWHNIRVQRTKQRAVLAVERKYTKQLFSPKTADLLDVVGMVYVGGLPQNYTT
KRIGPIVYSINGCIRNLMMSGGPVSARSAPAVIEDFKLDMSAPNSSHMVGQCFVATETGT
YFDGTGYLKAVSSYRVGLDVSIALEFRTSKTSGVLLAVSNQGNDGLGLEIVEGKLLFHVD
NGAGRITAEHVPTGKSFCDGQWHSVTSNKLRHRLELVVDGEKSQAQSPNARSNTCDTNDP
IYVGGYPAGVRQAALSTTSSFRGCMRNLKITKASKTMDVQFNKALEIKGVQPLSCPAGSA
NT seq
9543 nt
NT seq
+upstream
nt +downstream
nt
atggcagacataacaacgaatgctacctgtggtgaaaatggtccagagatgttctgtaaa
ctggtggagcatgtgcccggtcagcctgtgaggaacccacaatgtcgaatctgcaaccaa
cagagtccaaacccagttgagcatcatcctattgaatatgccatcgatgggaccaaccgt
tggtggcaaagtccatctatcaagaatggaatggattaccattatgtgacaatcactctg
gacttaaaacaggttttccaggttgcttacataataatcaaggcagccaactctcctcgt
ccaggtaattggatcttggagcgttcaatagatggagtgacttttgaaccttggcagtac
tatgccatcacagacaccgagtgtctgacaaggttcaacataaatccgcggacaggacct
ccatcttacactagagatgatgaagtgatctgcacgtcgttttattcaaaaattcatcct
ctggagaacggagagatccacacatctctgatcaatgggcggcccagtgcagatgaccca
tctccaaccctgctaaactttacctctgcccgctacatcaggttggttttccagcgaata
cgaacgctgaacgccgacctcatgactctgacactcagggaccccaaagatattgatttc
attgtgacaagacggtattattattccattaaggacatctcagttggagggatgtgtatc
tgttatggccatgccaaagcgtgcccactcaaccctgatacaaagaagtttagctgtgaa
tgtgagcacaatacatgcggggagagctgtgatcactgttgcccgggttaccaccagcag
ccatggatggcggggaccttcctcaccagacatgtctgcgaaaagtgcaactgccataat
aaggcagaggagtgctactttaatcagactgtggctgatctatcactaagccttgacatt
catggtcagtatcgaggtggtggcgtctgtactggctgccgggacaacacagctggaatc
aactgtcaaagctgcatttctggttactacagaccttcaacggtgagtccggatgaggag
gacccctgcattccatgctcgtgtgatccacatggttctatcagccaaacttgtgttgca
gatgaaagccaagcttcacctggtcagccagcagggtcatgctggtgtaaggaaggtttc
ggaggtctgcgatgtgacaggtgtgctattggatatatggggtacccaaactgtgagcac
tgtaattgcagtgtggaaggaagcatcaactccgacccgtgtgtgaccccatgtatatgc
aaggaacatgttgaaggagagaactgtgatcggtgtaaacttggtttctacaatctgcaa
ggtagtaatcgacgaggctgcgaaaaatgcttctgcatgggcattgcaagccaatgctcg
tcctccacttggaactttgggaaggtgaccactctggccggctggcacctgcttggagag
acaggagggagggtgtggcctgttcacagagagacaccttcttatctgacggtcagacac
tcagatattatgaacaaccttggctccgcctactactggaacgcacctgaagtatatctg
ggaaacaagatttcagcctatggaggagatgttgtattcactgtgtcttatacaacacat
gaacaagagcaagggagtatcagagtcacctcagagcctgaccttatcatagagggaggt
gggatcaagcttatagacaaaaggtttggccaaccagtatatccatcctcgacaagtacc
aaacacattgttctccttcctgagaacttccttgtctcggagattgagcagccgatcagt
aggagagatttccttctagtgctggctaatgtaacgagtttaatggtgcgggcctcatac
agcacggaaatgagtgccgtctacaggcttaactcattctcaatgcaggtggcaaattct
tctgccagtggaaagatagcatcagctgtagaaatgtgtgactgccctcctggatatgga
ggattatcttgtgagacctgtctccctggttttcggagggtccatggtaaactgtataat
ggtgtgtgtgaaccttgccagtgtcacggacacagtttgcattgccatgagttcacaggg
aattgcctggactgcatccaccacaccactggccatcagtgcgatacttgtctacctggt
tactatggcaatgccacccatgggacacctcaggactgtcagccatgtgcttgcccactt
actcttcctagcaacaactttagccccacatgccaccttggtgaaggaggagagctgctc
tgtgaccgctgtcagcccgggtacacagggccaagatgtgacagatgttccaatgggtac
tacggccaacctaacgtaccaggagaatcctgccaaccctgcaattgcaatggcaatctg
gacctttctgtaccagacagctgtgatccgatcacaggtcaatgtttgaggtgtcgccag
ggttacgaaggcttgacttgtgacacctgcagtgatggttactatggagacgccatcact
ttaaagaactgtcaaccctgccactgccacactaatggttctctatcagaagtttgtgac
aaggaaactggtcaatgccagtgcagagaaaatgtagtcggacttcagtgcgataagtgt
aaggctaactggtggtgggacgttgagctccaggaatgtatgccctgccgctgcagtcct
tatggctccacgtctcagcgctgtgacactgagggccgctgcatttgccgacctggcttt
gtcgcccgacgctgtaaccttcgtcgcctaggttacgagaggcgggagacgcggcggcct
attgagagtcttcccattgaagctgtgcagcagaggtggggggggacctcccgcacatca
gggggttgtcccaggggagcttacagacctcagacaggggctcagactcatggtgtcacc
acaggtggagtgtgtgttccatgtcactgcaactcattcggctcaaagtctttcgactgt
gatgaaatgggtcagtgtcgttgtcagccaggtgtcactggacccaaatgtgacagatgc
tcaagaggattcttcaacttccaggagggcggctgcacaccctgccagtgcagtcatgtg
ggaaacaactgtgatgcgaatactggacagtgcatctgccctcccaacacaattggtgag
aggtgtgaccgctgtgcacctaaccactggggccatgatatcacaactggatgtaaggag
tgtggctgcaatgggatcggctcagagacccagcagtgcaacgtgaacacaggctgctgc
aaatgtcgcgcttccttcagaggagagaaatgtgatgaatgtcaaatcgggtacagagac
ttccctcagtgtattccgtgtgagtgcagtattgcaggttcggactgcgagacctgcgac
cgggagaaaggagtatgtgcctgtgctgaccgaacagggaaatgtagctgcaaggaaaat
gtggaaggacacaattgtgatcaatgtaagtcagagacatttggactatctgaaaaaaat
cctcttggctgcagcaagtgctactgttatggactaacacgctcatgcacggaggcacga
ggacttataaggatgttgttgacactgaggccagagcagactgtgctccccctggtggat
aaatccaatactgtggagaagaggacaggagttagcttccagcaccctgagatccttgtt
catgcagaattggttgcagggactttgtctgagccatactactggagattgccagagcag
tttacaggctctatgatcacagcctatggagggcagctgaaatacgctgtgtactacgag
gctagagatgaaactggtccgtcatcctatgagcctcaagtcattattaaaggaggtcca
aatcacaacattctaataacccggcacatcccaggacttcagattggtcagctcactcgt
catgacatcgacatgacagagcatgaatggaggtatgaagatggccggtctatgacccga
gaggacttcatggatgttttgttctacgtggactacatcctcataaaggcatcacatggc
agtctgatgagacatagccgtatttcagaaatcagcttaaccgtagcagaggagggaacg
ccgacagagctaaatgaaaaagcccatcaaatagaaaaatgcgactgtcccactggatac
tctgggctttcctgtgaggaatgtgcggcaggtttctatcgtctccgctatgggtcgctg
gtttctgtcccagcatccagagtgcccacagctgcaggcatgggcagctgtgtccagtgt
cagtgcagtgggcattcctccacttgtgaccctgagacttcaatatgccagaactgccaa
gacaacacagagggggatcactgcgaacgttgcgctccaggattctacggcgtcatccgt
ggttctacagatgactgtaaaccttgtgcctgtccccttaccaaccctgagaataatttt
agccctacatgtgtggcagaaggtgttgatgatttccgttgtacagcctgtcctgaggga
tatgaggggaaatactgtgaaaggtgtgctactggttatcatggtaacccgacgatgcca
ggtggtcgctgtgaggagtcctgtgacgatgagtgctcaggtttgctaataagtgacatg
gaccgtctctatcgcatcatcaccgacgtcactctgactacaccccttccaccaccatat
aaagtcctgtaccgctttgagaacatgacagacgagatcaagcacatgttgtcgcctcag
aaagctccagagagattactgcaactggccgactccaacctgggatcactggtggtagag
atggaccagctacatagcagggcgactaaggtgtccgctgatggcgagcaggtagatgat
gatgcagacaggattcataaacgagctcaggacctggagcagttcattaaagacacactg
ttgggtgctaaagatctccaattcaaggctgcagaattgaacaggaccctctcaaggaaa
gatggaaccgcagacaaaagccttaccgagatgaaggaggagattcaggcgatgctcgcc
gagatgagaaaacgacagctgggaggaatgaaaagcattgctgaagaggaggaggatcta
gcagaagagttgtatcagaaagtcaaaagactgtttggtaaccctcatcaagccactgag
gatttaaaagccgagatcaaagaaaagctgtctgatcatgagaggaaactccaggaggct
gaagatttactgcattctgcccaaggaaagacgaggcaggctggctcactggcagagaac
aacaaagccaaccttactcttctacagaaaaagcgagatgcagtcagcggtgtgaaacaa
gacgcacaaaagatccttggagaaggaaataatttactagatgaggcaaatcagctttct
gacaacatcaacaaggaacttgaggagttagaggggatggaaagagatcttgatcctctt
catgctcagctggatgacaaagttcagggacttgctgatggcttgagtgatggtagcgtt
gcagaaaaagtcggcgaagcagaggaacatgccaaacagctgaatgagtctgctgccatt
ttagacggcattttggctgaagctaaaaacctgtctttcaatgcaactgctgctgtccat
gcttatagtaatattaaagccaatattgatgcagcagagaaagaggcaaaggcagccaaa
cagaatgcaaatgaggctctgtcactggttttgggtccagatgttccagtaaaggaagcg
gctcaaattgccctccagaagagtcaaatactgctgaacaaagccaaacaacttcagaat
gatgttaaagaaaatgcagacaatgtggcgggactgaaggggagagttaaagcagcgaga
gacaaaaccaaaggccttctgactgctgttaatggaaccctggctacactcaacgccatg
cccaatgatacatcatataaattagcagctacaaaagcagtagcagctgatgccaatgtt
acagcaatagacgtcctagagcgccttgcagatctgaacctccgccttggaaacctgcag
ctgaactgcagcgagttggaagacactgttgacgcagccaatcagatgatccaggaccct
gaaaaaaacacaatcatccatgctgcaggagctaaagtgaaggatttggaggatgaagcc
gacaggctgctggagaagctgcaaccaattaaaaagcttcaagacaatttgaggcggaac
atctcacaaataaaggaactgatcaaccaggccagaaagcaagcaaattcaatcaaagtt
tctgtttcatcaggtggtgactgtctccgtagttatcgccctgatatcagaaaaggaagg
tacaatactatcatccttcatgttaaaaccaccacaccggataacctccttttttacctt
ggatctgccaaatatgttgatttcttggccctggagatgcgcaaggggaaagtgaatttc
ctttgggatgtgggttcaggtgtgggaagggttgaatatccccatcacacaatctacgac
ggtaattggtaccggatagaagcgtctcgtaatggtctgaatggtaccatatcagtctat
cctttggacggtcctatggctggcatgatgccaacacccgccagtgccaactcacccaca
gcttacaccatcttagacgttgaccagaacgcctacctgtttgttggaggaattcttagc
actgcaaagaaggcagaagcagtgaaaacatcaacatttacgggctgcatgggagagacc
ttcttggatggtaaacctattggtttgtggaactacagagacagacagggagactgcaaa
ggttgcgttgtcagtcctcagcgaaccgatggtgaggggacagttcagctggatggggaa
ggctatgctgcagttggacgaccaacaaggtggaacccaaatgtttccacgataaccttg
aagttccgcactttctcctctgatgctttgctcatgtacctggccactgaagacatgaag
gacttcctatctctggagctgttagaagggaaggtgagggtgaattttgaccttggatca
ggagttggtagtgccacatcagctaaccgccacaatgatggacgctggaaagctctcacc
atgtcaaggaacaaaaaacaagctgttgtgattgttgtggatatcagccaaggtactgag
gaaaagattgtggccatatccaagggttcggctactggtcttaatctgaaggaaaatcag
aaaatatattttggtggtctgccaacgattggaaactacagcatggcagccaggtcagag
gtgattctgaaaaggtatgcaggttgtctcaaagacatagaagtctccagaactccatat
aatcttctaagcagcactgattatacaggggttactaaaggatgtaatgtcgagaaactc
tacacagtgagctttagtaaaccaggatacatggagctggatggcctttcttttgcaatc
aatacggagatcagcttgtctttcagcactctatcagacactgggattatattgctggca
gtaggagggacttcaccaatcagcaaagagcctcgccgtccaaacttaaattcaaagaga
agacgaagacagtcaggagagccctaccttttagttatgcttaacaaaggctctctggag
gtcctcataaatactggcagtcatactcagcgttgtgtcgtcaggcggcctgaccaagga
aacctgaatgacggcagggagcattccctgcgcatagaaaggctggctggaaggtccttt
gcagtccaggtggatgaggaacccaagagagaagcagggcttccaaacgaccagccaatg
aggctgcggcacattttccttggtggtattccaccagaggtggagcggacatctaacaga
gtcaacatcccattcaaaggatgcatatggaaccttatggttaattcaattctctcagat
ttctctcagccggtttcctttgaaaatgctgaaattggtcagtgtccaaacctcgctcct
ccaccacctctccctcctctaccagaagaagagaaaactgaggaaaagaaaatggattta
aaaccactccatcctacagtccccccagctcctggaacaccacctcctagtggtccagag
gaggccacaccccctgtcccagctgctgccacacccatctcgcctgctgctgtagcaaca
cccactgctaaactggatcccattatagacccggactcgtgtgcatcagctgtggccccg
acatcactcgaaaaggcatatcagtttggactgaccaggaatagtcacatgagcttcgcc
tttgatgacactaaagtcagagagaagctgctgttggagtttgagctgaggacaaaagag
ctttctggccttgtgctctatatggcgagaataaaccacgcagactttgtttccatccag
atcaaggagggacaagcttgtcttggttacgatcttggtcatggaaacatttctggttgc
gttcccttctccataaatgatggtaactggcacaatatccgtgtgcaacgtaccaagcag
agagctgtgctggcggttgagcgtaaatatacaaaacagttgtttagtccaaagacggcg
gaccttttagatgtggttggaatggtgtatgttggtggattaccacagaattacaccaca
aaacgcataggaccaattgtctacagtattaatggatgtatccggaacttaatgatgagc
ggaggtcctgtcagcgctaggtcagctccagcagtaattgaagactttaaactggacatg
tctgcacccaactccagtcacatggttggacaatgttttgttgctactgaaacaggaacc
tattttgatggcactggatatctgaaagcagtatcctcctatagagtgggtctggacgta
tcaatagcacttgagtttcgaaccagcaaaaccagtggagttctcttggcggtcagtaac
caaggcaatgatggactgggtttggaaatcgtcgaaggcaagctgcttttccatgttgac
aacggagctggcagaatcactgcagagcatgtgcctacaggcaagagcttctgtgatggc
cagtggcacagcgtcacttccaacaagcttcgccacaggctggagctggtggtcgatggg
gaaaagagccaagcacagtctccgaatgctcgctccaacacctgcgataccaacgacccc
atctatgttggaggatatcctgctggagttcggcaggcagctctttctaccacgtcttcc
ttcaggggctgtatgaggaacctgaagatcactaaggcttctaagaccatggatgtgcag
tttaacaaggccctggagattaaaggagtccagcctctatcctgccctgctggatctgcc
taa
DBGET
integrated database retrieval system