Cyprinodon tularosa (White Sands pupfish): 119774054
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Entry
119774054 CDS
T07496
Name
(RefSeq) rhodopsin-like
KO
K04250
rhodopsin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119774054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ctul04030
]
119774054
G protein-coupled receptors [BR:
ctul04030
]
Rhodopsin family
Vision
Opsin
119774054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
119774054
NCBI-ProteinID:
XP_038127280
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MNGTEGPNFYVPMSNKTGLVRSPFEHPQYYLAEPWKYSLLAAYMLFLIITAFPINFLTLH
VTVKHKKLRTPLNYVLLNLAVADLLMIIGGFTVTLYTALHGYFILGVSGCNIEGFFATLG
GEIGLWSLVVLAVERYVVVCKPMTNFRFEEKHAIAGLGFSWVMALTCAAPPLFGWSRYIP
EGMQCSCGIDYYTPKPEINNTSFVIYMFVLHFCIPLFIIFFCYSRLLCTVRAAAAQQQES
ETTQRAEKEVTRMVIVMVISFLVCWVPYATVAWYIFANQGIEFGPVFMTAPAFFAKSAAL
YNPVIYILLNKQFRNCMITTVCCGKNPFGDDEAAAAVSKTQTSSVSSSQVAPA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcacagaaggacccaacttttatgtacccatgtctaataagactgggttggtg
cgcagcccatttgagcaccctcagtactacctagccgagccgtggaagtactctcttctg
gctgcatacatgctgttcctcatcatcactgccttcccaattaacttcctcacccttcat
gtcactgtcaagcacaaaaagctgagaaccccgctgaactacgtcctgctcaacctggcg
gtggccgacctcttgatgataattggaggattcacggtgaccctgtacacggctctgcac
ggatacttcatcctcggtgtcagtggctgcaacattgagggattctttgccaccttagga
ggggagattggcctctggtctctggtagttttggcagttgagcgctatgtcgtggtctgt
aagccaatgacaaactttcgctttgaggagaaacacgccattgctggactggggttctcc
tgggtcatggctctgacctgtgctgctccacctctgtttggatggtcgcggtacatccca
gagggcatgcagtgttcctgtgggattgactactacacgccgaagcccgagatcaacaac
acctcattcgtcatctatatgttcgtcctccacttctgcatccccctcttcatcattttc
ttctgctacagtcgcctgctctgcactgtgcgagcggctgcagctcagcagcaggagtca
gagaccacccaaagagcagagaaggaggtgacacgcatggtcatagtgatggtgatctcc
ttcctggtgtgctgggtgccctacgccactgtggcttggtacatctttgccaaccaggga
attgagtttggaccagtattcatgacagcgccagccttttttgccaaaagtgctgctctg
tataatccagtcatctacattctgctaaacaaacagttcagaaactgcatgatcaccacc
gtgtgctgtggaaagaacccatttggtgacgatgaggcagccgccgcagtctccaaaacc
cagacttcatccgtctcctccagccaggtggcccccgcttga
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