Cyprinodon tularosa (White Sands pupfish): 119774059
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Entry
119774059 CDS
T07496
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119774059 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119774059 (ogg1)
Enzymes [BR:
ctul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
119774059 (ogg1)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119774059 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
119774059
NCBI-ProteinID:
XP_038127287
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MTRHAVFSSGAKMWRSLQCAKSELRLDLTLACGQTFRWRETSEGHWTGVIGGRVWTLTQT
EDTLWYYLYKNQDAAGGKNKPKKKDTPRSDEEETQSATSSQDAEVEAEMLRDYFQLHVKL
GDLYREWGAADCHFKEISDIFTGVRMLRQDPTECLFSFICTSNNHISRIQGMVERLCQAL
GAPLCQLDQTFYHDFPTLSTLAESRVEERLRDLGFGYRARFLQQSAKQILDTNGLQWLDS
LRNVPYPEAREALRTLPGVGTKVADCVCLMSLDKSEAVPVDTHVWQIAKRDYKYTANNGQ
KTLTEKVHRDIGDFFRKLWGPYAGWAHSVLFCADLKRFQNLKEISLKQPKKEEEHEEKCK
EIKIKREFDGQEKKTKSKSERQKKAKMSVKTEEV
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaccagacatgcagttttctcttcaggggccaaaatgtggagatctttgcagtgcgca
aagtcagagctgcgtttggatctcaccctcgcttgtggacagactttccgctggagggaa
acgtctgaggggcattggactggagtgataggggggcgtgtgtggaccctcacccagact
gaagacactctttggtactatttgtataaaaaccaggatgcagctggtgggaaaaacaaa
cccaagaagaaagacactccaaggagtgatgaggaggagacacagtctgccacctcctca
caggatgctgaggtggaagcagagatgctgagagactacttccagctgcatgtgaagttg
ggggatctatacagggagtggggtgcagcagactgccactttaaggagatatctgacata
tttacaggtgtgcgaatgctgcgtcaggatcccacagaatgcctcttttcattcatttgc
acgtccaacaaccacatctcccgtattcagggtatggtggagagattgtgtcaggctctg
ggtgcacctctctgccagctggatcaaaccttctaccatgactttcctacactttctact
cttgcagagagccgtgtagaagaacgtctcagggatcttggcttcggttacagggctcgg
ttccttcagcagagcgcaaagcagatcctggacaccaacggactccagtggcttgatagt
ttacggaatgttccgtatccggaggcccgtgaggctctgcggaccctccctggtgttggc
accaaggtggcagactgtgtttgtttgatgtctctggataaatccgaggctgtacctgtg
gacacgcatgtttggcagattgctaagcgggactataaatacactgctaataatggacaa
aagactcttactgaaaaagttcacagagatattggagattttttcagaaagctgtgggga
ccatatgcaggttgggcccattcggttttattctgcgctgacctcaagagattccagaac
ctcaaagaaataagcttgaaacagccgaagaaagaagaagagcatgaagaaaagtgtaag
gagataaaaataaaaagagagtttgatggacaggaaaagaaaacgaaatccaagtcagaa
cgtcagaagaaggcaaagatgtccgtcaagacagaggaggtgtga
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