Cyprinodon tularosa (White Sands pupfish): 119774100
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Entry
119774100 CDS
T07496
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119774100 (rbm39b)
Spliceosome [BR:
ctul03041
]
Common components
Common spliceosomal components
General mRNP proteins
119774100 (rbm39b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
119774100
NCBI-ProteinID:
XP_038127358
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MADDFDVEAMLEAPYRKDENKSYHANGHDEHGKKKRRSRSRSRSPGSRKKKSRSRSKDRK
KSKKRSRSRDKKRSRSKERHRSSSRSRDRAGRYKARKSPIRKRSKSRSPFKKEKSPVRQP
IDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEF
VESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSAGPMRLYVGSLHFNI
TEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQLNGFELAGRPM
KVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLKIPPAAQQALQM
TGSIPFGGIPTPAVSIPAPSQALNLPSQPLATHCLQLSNLFNPQAENDPNWASEIQDDVI
DECNKHGGVVHIYVDRNSPQGNVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTY
HNLFPDSVTAKQLLMPSRR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgattttgacgtcgaggccatgctggaagctccataccgaaaggatgagaac
aagtcctatcatgcaaatggacacgatgaacatggcaagaagaagagaaggagtcgaagc
aggagccgtagtccaggctcaaggaagaagaaaagtcgtagcaggagcaaagacaggaag
aagagcaagaaaaggagcaggagcagagataaaaaacgcagccgcagcaaggagcgccat
cgtagcagctccagaagcagagatcgcgctgggcggtataaagcacgcaaaagccccatc
cggaagcgctccaaaagtcgaagtcccttcaagaaagaaaagagtcctgttaggcaaccg
attgacaatctaacaccagaggagagggatgcccgtacagttttctgcatgcagcttgca
gcaagaatcagggctcgtgatctggaggatttcttctctgcggttggaaaggtcagagat
gtacgaataatttctgatagaaactctcggaggtcgaagggcattgcatacatagagttc
gtggagtcatcctctgtaccactggcaattggactaactggccagaggcttttgggtgtg
cccatcatcgtccaggcttcgcaggcggagaaaaatagggcggctgctgcagccaataac
ctacagaagggcagcgcgggtccaatgaggctgtatgtgggttcgcttcattttaacata
actgaagaaatgctccgagggatctttgagccctttggaaagattgaaggaatccagctc
atgatggacagtgagactgggagatctaaaggatatggcttcatatcgtttgcagatgca
gaatgcgcaaagaaggccttggagcagctcaatggatttgaactggcaggtcgtccaatg
aaggtgggacacgtcacagagcgctcagattcctctacagccagctctttcctggacaat
gatgaactggaaaggactggtatcgacctgggcacaacaggacgtttgcagctcatggct
agacttgcagaaggaacaggcctgaaaattcctcctgctgctcagcaggctctgcagatg
actggatccataccttttgggggcatacctaccccagcagtttctattcctgcaccgagc
caagccctgaacctcccctcacagccgctagccacacactgccttcagctctccaacctg
tttaacccacaagcagagaatgatcctaactgggcctcagaaatccaagatgatgttatt
gatgagtgcaacaagcacgggggagttgttcacatttatgttgacaggaactcacctcag
ggtaatgtgtatgtgaagtgtccctcaataccggcagcaatggcgacagtcaatgcactt
catggacgctggtttgcaggcaaaatgataacggctgcttatgttcctctaccgacctac
cacaaccttttcccagactctgtaacggcgaagcagcttctaatgccttcacgtcgatag
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