Cyprinodon tularosa (White Sands pupfish): 119774149
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Entry
119774149 CDS
T07496
Symbol
zgc:158828
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119774149 (zgc:158828)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119774149 (zgc:158828)
Spliceosome [BR:
ctul03041
]
Complex C
Other components
Complex C specific factors
119774149 (zgc:158828)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
nSTAND3
AAA_7
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
119774149
NCBI-ProteinID:
XP_038127455
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MAAPRSTMKFWKPGSEAPGISEERDLSSETTGSPIIFNPNTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPQATRIKFLTDGMLVREMMADPLLKRYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRVIVASATLDAKKFHEFFNLNESGDPNKDTCGILTVEGRT
FPVDIFYTVSPVPDYVKATVETVMKIHEMEDDGDVLAFLTGQEEVEKVVSLLQEQARALS
RYGMKKHLRILPMYSGLPYADQMKVFERAPPTVRKIVVATNIAETSITINGIMFVIDCAF
VKLRAYNPRTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDYEKLPAATVPEM
QRSNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPPNQKKDAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLVRAVAVREQLRRLMNKFKVPRTSSEGD
PDVILRCIVSGFFANAARIHHSGSYRTLRDDLELHIHPSSVLYGEKPPKWVVFNEVMQTS
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccccgctccacgatgaaattttggaagccggggtctgaggctccggggatc
tcagaggaacgggatctgagctcggagaccaccggatcccccatcatcttcaatccaaac
acagccctctctatagagaagcagcggcaaaagcttccagtttttaagcacagaaacaac
atattatacctggttgaaagcttccagactgttattatagttggggagaccggatgtgga
aagacaacacagatccctcagtacctgctggaggctggctgggccgcggaggggaaagtg
attggagtgacgcagcctcgacgtgtggctgctatctcggttgctaaccgtgttgcggag
gagcgaggtgccctgctgggacacgaggtgggctacaccatccggttcgatgactgctct
gacccccaagccaccaggattaagtttctcacagatggaatgcttgtgcgagaaatgatg
gcagaccctcttttaaaaagatacagtgtgttgatgttggatgaagcacatgagagaact
ctgtacacagacatagccattgggctactgaaaaagattcaaaagaagaggcgggacctg
agggtgatagttgcctctgccactcttgatgccaagaaattccatgagttcttcaacctg
aatgagtctggggatcccaacaaggacacttgtggaatcctgacagtagagggacgtact
tttccagtggacatcttctacactgtcagtccagtcccagattatgtgaaggccacagtg
gagacggtgatgaagattcatgagatggaagatgatggggacgttcttgctttcctcact
gggcaggaagaggtggagaaggtggtgtccctcctgcaagaacaagccagagctctttct
cgatatggtatgaagaaacacctgagaatcttgcccatgtactctggtctaccctatgca
gaccaaatgaaagtctttgaaagggctccccctactgttcgcaagattgtggtggccaca
aacatagctgagacgtctatcaccataaacggtatcatgtttgtcatcgactgtgcattt
gtgaagctacgggcctacaatcctcgcactgccattgaatctctggtggtcactcccatc
tcaaaggcctcagccagccagagagctgggagggcaggacgaaaccgacctgggaagtgc
tttaggctatatacagaggaggactacgagaagctacctgctgctaccgttccagagatg
caacgctctaatttagcccctgtaatcctgcagctcaaagcattggggatagacaacgtt
ctgcgctttagcttcctttctcctcctccagcccagactatggttcaggctctggaactt
ctttacgctcttggaggtttggaccattacggccgtttgactgaccccatgggtgtgcgg
atggcggagtttcctctcagccccatgtttgctaagatgctcctagagtctggaaacttt
ggctgctccaaagagatagttaccatagctgccatgatgcagatccagaatatatttgtt
gtgcctccgaatcagaagaaagatgccgctcgtgaacacaggaaatttgcagtcgctgag
ggagaccacctcactatgctgaatgtatatgaggcattcattaagcatcagaaaagctcc
caatggtgtcaggagcattttcttaattacaaaggtcttgtccgcgccgtcgcagtaaga
gagcagcttcgccgtctcatgaacaaatttaaagtgccacgaacttccagtgaaggtgac
ccagatgtgatcttgaggtgtattgtgtctggattctttgctaatgctgctcgcattcat
cactctggctcctatcgaactttacgagatgatcttgaacttcacattcatcccagctct
gtgctgtatggagagaagcctccgaagtgggtcgtctttaacgaagtgatgcaaacctca
aaatactacatgcgtgatgtgactgctgtggagtcatcctggctggtggagttggcccct
catttttacaagcaggctaagcatggttcgctggccagcaagagatctagagtcctctga
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