KEGG   Cyprinodon tularosa (White Sands pupfish): 119774184
Entry
119774184         CDS       T07496                                 
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013  Nucleocytoplasmic transport
ctul03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    119774184 (srrm1)
   03015 mRNA surveillance pathway
    119774184 (srrm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctul03019]
    119774184 (srrm1)
   03041 Spliceosome [BR:ctul03041]
    119774184 (srrm1)
Messenger RNA biogenesis [BR:ctul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     119774184 (srrm1)
Spliceosome [BR:ctul03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    119774184 (srrm1)
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 119774184
NCBI-ProteinID: XP_038127499
LinkDB
Position
Unknown
AA seq 851 aa
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLATLKKVDQDKKDKETRERTRSKSPRRWKTRSPGKRERKR
SPSRSPVRKPSPVGGDSPPPPVVQSNTKTSEQPEEPDTSGTGLPETVIQEASSTGLIDTV
VESVKADSVAEVKEPSREKSPKKEERPRSREREKDSRRERPHHRSRSHSRSRRRRSRSRS
YSPRRRQSPRRRMSPRRRSPPRRGPTGSRHRHRRSPIHRRRSRSASSSGSSSSGSRSPKK
PVKRISTTPPRKQAHHPDVSVSPARKEKSSPSPRARRGRGSPSPPRSSGLKRKPGGRDDS
PPDFVKARTSEGSESEEDKNEKGATADSVQQRRQYRRQNQQSSSDSGSSSSEDEGPKRPT
AGPGARNGEVRRKRSRTPSPRRRHRDPSPRRRRSPSPVRRRRSPSPPRRRRSPSPPRRRS
PSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKLSNSPTKRFSPGPKRRSSRSPKRRSS
PPQRRRSPPSTVSPPRHRRSPLSARPSRDTRSPVGSARCLSRSPANRSRPIRRSTSPQRR
FQSPSMSPSNQRRQLSPPQGSKLIRRVSRTPEPRNKRISPSPKPIRRASSRSLSPQPAAQ
KRPASASPSPSRSVSGSPPPPPAKKASSASGSQSPGKNSDVDGGGKKKKKKKEKKHKKDK
KHKKHKKHKKEKSSAAVTSDVQESRAAEEDGDSRKESESEVDDSLDDLEKHLREKALRSM
RKAQLSPSEMS
NT seq 2556 nt   +upstreamnt  +downstreamnt
atggacgcgggatttttccgcggtacgagtgcggagcaagacaaccgtttcagcaacaag
cacaaaaaactgctaaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccatggattacgcaacgtgtgactgagattctg
gggtttgaggatgacgtggtcatagagttcatattcaaccaacttgaagaaaagcatccc
gacagcaagatgatgcagatcaacctgacggggttcttgaacgggaagaatgcccgggag
ttcatgagagacctttggcccctgctgttgagcgctcaggagaacattgctggcatcccg
tctgcttttctggagcaaaagaaagaagaaatccgacagagacagattgaacaggagaaa
cttgccaccttgaaaaaggttgaccaggataagaaggacaaggagaccagagaaaggact
cgatcaaagagtccaagaagatggaagacgaggtcaccaggaaaacgcgaaaggaaacgc
agtccatcgcgatccccagtgcgtaaacctagcccggttggtggggactctccccctccg
cctgtggttcagtcaaacactaaaacatcagagcagcccgaggagccggacacatcagga
acaggcctgccagagacggttatccaagaagcttcgtctacaggattaattgatacagtt
gtagagtcagttaaagcagactctgtggctgaagtcaaagaaccatctagagaaaaatcc
ccgaagaaagaggaacgaccaagatctcgtgaaagggaaaaggactctaggagggaaagg
ccccaccatcgctcacgttctcactctcgttcccgcagacgacgctctcggtctagatct
tactcccctcgtagaaggcaaagtcccaggaggagaatgtctcctcgacgaaggagtcca
cctagacgtggccccactggctccaggcacagacacagacggtcccctattcacaggcga
cgttcccgttctgcttcatcttctggtagcagctcctctgggtcacgttcacctaaaaaa
cctgtaaaaagaatatctaccacaccaccccgaaaacaagcccatcatcccgatgtatct
gtaagccccgctaggaaagaaaagagctcgccttctcctagggccaggagaggccggggc
tctccttcccctcccagatcatcaggactgaaacgaaaacctggaggaagggatgattct
cctcctgattttgtgaaggccagaacatctgaagggtctgaatcagaggaggataaaaat
gagaaaggggcaacagcagattcggtgcagcagcgacgtcagtatcgcagacagaatcaa
cagtcttcttcagattcaggatcttcgtcctcagaagacgaaggaccaaagcggccgaca
gcggggccaggcgccagaaatggtgaagttagaaggaaacggagccgtacaccctcacct
cgtaggcggcatagagacccctccccaaggaggagacgttctccatctccagtacgcaga
cgtcgctctccttccccgccacgacgtcggagatctccctcccctcctagacgcaggtct
ccttcccctcctccgcgtcgtaggtctccgtctcccaggcgttattctcctcctatccaa
cgtcgctacagcccctcacctttgcccccacagaagaggaagctgtccaattcccccacg
aaacgcttttctcctggtccaaagcggcgctcctccaggtcgcctaaacgtagaagttct
cctcctcagcggagacgttctcctccctccactgtttctcctccgagacacaggaggagc
ccgctgtctgccaggccaagcagggacactcgatcccctgttggatctgctagatgcctc
tccaggtcgccggcgaaccgcagtcgccctattaggcgatccactagtccccaaagacgc
tttcaatctcccagcatgtctccgtccaaccagcgaagacagctgtcccctccacagggc
agtaaactcatccgcagggtgtctcgcaccccagagccacggaataaacgaatctctccc
agtccaaagccgataaggagagcatcctccagatcactttcccctcagcctgcagctcag
aagcgtccagcctctgcctccccctcaccttctcgctctgtgagtgggtctccaccacca
ccccctgctaaaaaggctagcagtgcttctggcagtcagtctccaggaaagaactctgat
gtggatggtggtgggaagaaaaagaagaagaagaaggaaaagaaacataagaaagataag
aagcacaaaaagcacaagaagcataagaaggaaaagagcagtgccgctgtgaccagcgac
gttcaagaaagtcgggctgcagaggaggatggtgattcaagaaaggaatcagagagcgaa
gttgacgacagcttagatgatctggagaaacacctccgagaaaaggccctgcgctcaatg
aggaaggcccagctgtctccctcagagatgtcctga

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