| Entry |
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| Symbol |
srrm1
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| Name |
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
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| KO |
| K13171 | serine/arginine repetitive matrix protein 1 |
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| Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ctul00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119774184 (srrm1)
03015 mRNA surveillance pathway
119774184 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ctul03019]
119774184 (srrm1)
03041 Spliceosome [BR:ctul03041]
119774184 (srrm1)
Messenger RNA biogenesis [BR:ctul03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119774184 (srrm1)
Spliceosome [BR:ctul03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
119774184 (srrm1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
851 aa
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLATLKKVDQDKKDKETRERTRSKSPRRWKTRSPGKRERKR
SPSRSPVRKPSPVGGDSPPPPVVQSNTKTSEQPEEPDTSGTGLPETVIQEASSTGLIDTV
VESVKADSVAEVKEPSREKSPKKEERPRSREREKDSRRERPHHRSRSHSRSRRRRSRSRS
YSPRRRQSPRRRMSPRRRSPPRRGPTGSRHRHRRSPIHRRRSRSASSSGSSSSGSRSPKK
PVKRISTTPPRKQAHHPDVSVSPARKEKSSPSPRARRGRGSPSPPRSSGLKRKPGGRDDS
PPDFVKARTSEGSESEEDKNEKGATADSVQQRRQYRRQNQQSSSDSGSSSSEDEGPKRPT
AGPGARNGEVRRKRSRTPSPRRRHRDPSPRRRRSPSPVRRRRSPSPPRRRRSPSPPRRRS
PSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKLSNSPTKRFSPGPKRRSSRSPKRRSS
PPQRRRSPPSTVSPPRHRRSPLSARPSRDTRSPVGSARCLSRSPANRSRPIRRSTSPQRR
FQSPSMSPSNQRRQLSPPQGSKLIRRVSRTPEPRNKRISPSPKPIRRASSRSLSPQPAAQ
KRPASASPSPSRSVSGSPPPPPAKKASSASGSQSPGKNSDVDGGGKKKKKKKEKKHKKDK
KHKKHKKHKKEKSSAAVTSDVQESRAAEEDGDSRKESESEVDDSLDDLEKHLREKALRSM
RKAQLSPSEMS |
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| NT seq |
2556 nt +upstreamnt +downstreamnt
atggacgcgggatttttccgcggtacgagtgcggagcaagacaaccgtttcagcaacaag
cacaaaaaactgctaaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccatggattacgcaacgtgtgactgagattctg
gggtttgaggatgacgtggtcatagagttcatattcaaccaacttgaagaaaagcatccc
gacagcaagatgatgcagatcaacctgacggggttcttgaacgggaagaatgcccgggag
ttcatgagagacctttggcccctgctgttgagcgctcaggagaacattgctggcatcccg
tctgcttttctggagcaaaagaaagaagaaatccgacagagacagattgaacaggagaaa
cttgccaccttgaaaaaggttgaccaggataagaaggacaaggagaccagagaaaggact
cgatcaaagagtccaagaagatggaagacgaggtcaccaggaaaacgcgaaaggaaacgc
agtccatcgcgatccccagtgcgtaaacctagcccggttggtggggactctccccctccg
cctgtggttcagtcaaacactaaaacatcagagcagcccgaggagccggacacatcagga
acaggcctgccagagacggttatccaagaagcttcgtctacaggattaattgatacagtt
gtagagtcagttaaagcagactctgtggctgaagtcaaagaaccatctagagaaaaatcc
ccgaagaaagaggaacgaccaagatctcgtgaaagggaaaaggactctaggagggaaagg
ccccaccatcgctcacgttctcactctcgttcccgcagacgacgctctcggtctagatct
tactcccctcgtagaaggcaaagtcccaggaggagaatgtctcctcgacgaaggagtcca
cctagacgtggccccactggctccaggcacagacacagacggtcccctattcacaggcga
cgttcccgttctgcttcatcttctggtagcagctcctctgggtcacgttcacctaaaaaa
cctgtaaaaagaatatctaccacaccaccccgaaaacaagcccatcatcccgatgtatct
gtaagccccgctaggaaagaaaagagctcgccttctcctagggccaggagaggccggggc
tctccttcccctcccagatcatcaggactgaaacgaaaacctggaggaagggatgattct
cctcctgattttgtgaaggccagaacatctgaagggtctgaatcagaggaggataaaaat
gagaaaggggcaacagcagattcggtgcagcagcgacgtcagtatcgcagacagaatcaa
cagtcttcttcagattcaggatcttcgtcctcagaagacgaaggaccaaagcggccgaca
gcggggccaggcgccagaaatggtgaagttagaaggaaacggagccgtacaccctcacct
cgtaggcggcatagagacccctccccaaggaggagacgttctccatctccagtacgcaga
cgtcgctctccttccccgccacgacgtcggagatctccctcccctcctagacgcaggtct
ccttcccctcctccgcgtcgtaggtctccgtctcccaggcgttattctcctcctatccaa
cgtcgctacagcccctcacctttgcccccacagaagaggaagctgtccaattcccccacg
aaacgcttttctcctggtccaaagcggcgctcctccaggtcgcctaaacgtagaagttct
cctcctcagcggagacgttctcctccctccactgtttctcctccgagacacaggaggagc
ccgctgtctgccaggccaagcagggacactcgatcccctgttggatctgctagatgcctc
tccaggtcgccggcgaaccgcagtcgccctattaggcgatccactagtccccaaagacgc
tttcaatctcccagcatgtctccgtccaaccagcgaagacagctgtcccctccacagggc
agtaaactcatccgcagggtgtctcgcaccccagagccacggaataaacgaatctctccc
agtccaaagccgataaggagagcatcctccagatcactttcccctcagcctgcagctcag
aagcgtccagcctctgcctccccctcaccttctcgctctgtgagtgggtctccaccacca
ccccctgctaaaaaggctagcagtgcttctggcagtcagtctccaggaaagaactctgat
gtggatggtggtgggaagaaaaagaagaagaagaaggaaaagaaacataagaaagataag
aagcacaaaaagcacaagaagcataagaaggaaaagagcagtgccgctgtgaccagcgac
gttcaagaaagtcgggctgcagaggaggatggtgattcaagaaaggaatcagagagcgaa
gttgacgacagcttagatgatctggagaaacacctccgagaaaaggccctgcgctcaatg
aggaaggcccagctgtctccctcagagatgtcctga |
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