Cyprinodon tularosa (White Sands pupfish): 119774184
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Entry
119774184 CDS
T07496
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013
Nucleocytoplasmic transport
ctul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119774184 (srrm1)
03015 mRNA surveillance pathway
119774184 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119774184 (srrm1)
03041 Spliceosome [BR:
ctul03041
]
119774184 (srrm1)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119774184 (srrm1)
Spliceosome [BR:
ctul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
119774184 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
119774184
NCBI-ProteinID:
XP_038127499
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMRDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLATLKKVDQDKKDKETRERTRSKSPRRWKTRSPGKRERKR
SPSRSPVRKPSPVGGDSPPPPVVQSNTKTSEQPEEPDTSGTGLPETVIQEASSTGLIDTV
VESVKADSVAEVKEPSREKSPKKEERPRSREREKDSRRERPHHRSRSHSRSRRRRSRSRS
YSPRRRQSPRRRMSPRRRSPPRRGPTGSRHRHRRSPIHRRRSRSASSSGSSSSGSRSPKK
PVKRISTTPPRKQAHHPDVSVSPARKEKSSPSPRARRGRGSPSPPRSSGLKRKPGGRDDS
PPDFVKARTSEGSESEEDKNEKGATADSVQQRRQYRRQNQQSSSDSGSSSSEDEGPKRPT
AGPGARNGEVRRKRSRTPSPRRRHRDPSPRRRRSPSPVRRRRSPSPPRRRRSPSPPRRRS
PSPPPRRRSPSPRRYSPPIQRRYSPSPLPPQKRKLSNSPTKRFSPGPKRRSSRSPKRRSS
PPQRRRSPPSTVSPPRHRRSPLSARPSRDTRSPVGSARCLSRSPANRSRPIRRSTSPQRR
FQSPSMSPSNQRRQLSPPQGSKLIRRVSRTPEPRNKRISPSPKPIRRASSRSLSPQPAAQ
KRPASASPSPSRSVSGSPPPPPAKKASSASGSQSPGKNSDVDGGGKKKKKKKEKKHKKDK
KHKKHKKHKKEKSSAAVTSDVQESRAAEEDGDSRKESESEVDDSLDDLEKHLREKALRSM
RKAQLSPSEMS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggatttttccgcggtacgagtgcggagcaagacaaccgtttcagcaacaag
cacaaaaaactgctaaagcagctgaaatttgcagaatgtctggacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccatggattacgcaacgtgtgactgagattctg
gggtttgaggatgacgtggtcatagagttcatattcaaccaacttgaagaaaagcatccc
gacagcaagatgatgcagatcaacctgacggggttcttgaacgggaagaatgcccgggag
ttcatgagagacctttggcccctgctgttgagcgctcaggagaacattgctggcatcccg
tctgcttttctggagcaaaagaaagaagaaatccgacagagacagattgaacaggagaaa
cttgccaccttgaaaaaggttgaccaggataagaaggacaaggagaccagagaaaggact
cgatcaaagagtccaagaagatggaagacgaggtcaccaggaaaacgcgaaaggaaacgc
agtccatcgcgatccccagtgcgtaaacctagcccggttggtggggactctccccctccg
cctgtggttcagtcaaacactaaaacatcagagcagcccgaggagccggacacatcagga
acaggcctgccagagacggttatccaagaagcttcgtctacaggattaattgatacagtt
gtagagtcagttaaagcagactctgtggctgaagtcaaagaaccatctagagaaaaatcc
ccgaagaaagaggaacgaccaagatctcgtgaaagggaaaaggactctaggagggaaagg
ccccaccatcgctcacgttctcactctcgttcccgcagacgacgctctcggtctagatct
tactcccctcgtagaaggcaaagtcccaggaggagaatgtctcctcgacgaaggagtcca
cctagacgtggccccactggctccaggcacagacacagacggtcccctattcacaggcga
cgttcccgttctgcttcatcttctggtagcagctcctctgggtcacgttcacctaaaaaa
cctgtaaaaagaatatctaccacaccaccccgaaaacaagcccatcatcccgatgtatct
gtaagccccgctaggaaagaaaagagctcgccttctcctagggccaggagaggccggggc
tctccttcccctcccagatcatcaggactgaaacgaaaacctggaggaagggatgattct
cctcctgattttgtgaaggccagaacatctgaagggtctgaatcagaggaggataaaaat
gagaaaggggcaacagcagattcggtgcagcagcgacgtcagtatcgcagacagaatcaa
cagtcttcttcagattcaggatcttcgtcctcagaagacgaaggaccaaagcggccgaca
gcggggccaggcgccagaaatggtgaagttagaaggaaacggagccgtacaccctcacct
cgtaggcggcatagagacccctccccaaggaggagacgttctccatctccagtacgcaga
cgtcgctctccttccccgccacgacgtcggagatctccctcccctcctagacgcaggtct
ccttcccctcctccgcgtcgtaggtctccgtctcccaggcgttattctcctcctatccaa
cgtcgctacagcccctcacctttgcccccacagaagaggaagctgtccaattcccccacg
aaacgcttttctcctggtccaaagcggcgctcctccaggtcgcctaaacgtagaagttct
cctcctcagcggagacgttctcctccctccactgtttctcctccgagacacaggaggagc
ccgctgtctgccaggccaagcagggacactcgatcccctgttggatctgctagatgcctc
tccaggtcgccggcgaaccgcagtcgccctattaggcgatccactagtccccaaagacgc
tttcaatctcccagcatgtctccgtccaaccagcgaagacagctgtcccctccacagggc
agtaaactcatccgcagggtgtctcgcaccccagagccacggaataaacgaatctctccc
agtccaaagccgataaggagagcatcctccagatcactttcccctcagcctgcagctcag
aagcgtccagcctctgcctccccctcaccttctcgctctgtgagtgggtctccaccacca
ccccctgctaaaaaggctagcagtgcttctggcagtcagtctccaggaaagaactctgat
gtggatggtggtgggaagaaaaagaagaagaagaaggaaaagaaacataagaaagataag
aagcacaaaaagcacaagaagcataagaaggaaaagagcagtgccgctgtgaccagcgac
gttcaagaaagtcgggctgcagaggaggatggtgattcaagaaaggaatcagagagcgaa
gttgacgacagcttagatgatctggagaaacacctccgagaaaaggccctgcgctcaatg
aggaaggcccagctgtctccctcagagatgtcctga
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