Cyprinodon tularosa (White Sands pupfish): 119774233
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Entry
119774233 CDS
T07496
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctul01009
]
119774233 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119774233 (sh3rf1)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119774233 (sh3rf1)
Protein phosphatases and associated proteins [BR:
ctul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119774233 (sh3rf1)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119774233 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
119774233
NCBI-ProteinID:
XP_038127577
LinkDB
All DBs
Position
Unknown
AA seq
844 aa
AA seq
DB search
MDESILLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPQMAASGGGVCTNGTSGAVARAHGSGTRDQVTPGVQPQRAQ
AKSTAVRGVPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFP
TNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGD
KIGIFPISYVEFNSAARQLIELDKPSDSSGDSIEGASQGPQSNGAQRPGEKKNTKKRHSF
TSLTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSCSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPSETSYTSIALDALPPPPPPPPQSPASGASYSLAAGQRPSP
NVSDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTASGSNQPKVPMSLCTQAGRGVTIVSPSSASLGAVVPGPDFNKPPPACST
AASACSQPAAVTSAQTATGQQPKVPLHVSSQMTVNQARNAVRTAACHSQDRPTAAVTPIQ
SVTYLPHAAICPQSAANAQGCSRVGVAVGCAASSLTPPNVSAASLDGDALRSVPVGSNGI
LNPSSNGALACRVDKDVKREKKSLLKLLSSNKKKSRPSPPSSPTLEAEQAAAGEVLHGAV
GPDTSPPSGSVSCLEAEPAGVASSSSVPESSHRRTAPLDGCAPIAPPPRQPCSSLLSQQH
DARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKREDGWFKGTLQRNGRTGLFPGSF
VDSI
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtccattttactggatttgcttgagtgccccgtatgtctggagcggctggac
gcctccgccaaggtccttccctgccagcacactttctgccgtcgatgtctccagggcatc
ctgggctcgcgcggcgagctgcgctgcccggagtgccggacgttggtggagtgcgctgtg
gacgaactccccagcaacatcctgttggtgcgtcttttggatggcatcaagcagagacct
cagatggctgcctccggcggtggcgtctgcacaaacggcacgtcgggagccgtggcccga
gcacacggaagcgggaccagggaccaggtgactccaggagtgcagcctcagcgcgctcag
gcaaagagcaccgctgtccgaggggtgcctcagcttccttgtgccaaagcactgtataac
tatgacggcaaggaaccaggagacctcaaattcagcaagggcgacatcatcatcctgcgc
cggcaagtagatgagaactggtaccacggggagatgggtggagtccatggctttttcccc
actaacttcgtccaggtcatcaagcctctgccgcagccgccgcctcagtgcaaagctctc
tacgactttgagctgaaagacaaggaggccgacaaggactgcctgcccttctcgaaggat
gatattctgactgtgatccgcagagttgatgaaaactgggccgagggaatgctgggagat
aaaattggaattttccccatctcatacgtggagttcaactctgcagcacgccagcttata
gagttggacaagccatccgattccagtggagactccattgaaggggcctcccaggggccc
cagagcaatggcgcccagcggccaggagagaagaagaacactaagaaacggcattccttc
acttctctcaccatgtcccacaaacccatgctagctcctcccccccagcgccactccatg
gagattagcgggccggtcctcatcagctccagtaaccccaccgcagcggctcggattgga
gagatcagtggcgggctttcctgcagcgcaccttcacaggtacatatttgcacgacggga
ctcattgtgaccccaccccctagcagtccagttaccacagcaacagtcttcacgtttcct
tcagagacgagctacacatccattgcattggatgctctgccgccacccccacctcctcct
cctcagtccccagccagcggagcgtcgtattccctcgctgccggacagagaccctccccc
aatgtaagcgaccaaagtgggagacagagacctacagtctatgtggccatgttcccatat
actccccgtaaggaggatgagctggagctgaggaaaggagagatgtttttggtgctggaa
cgctgtcaggacggctggttcaagggcacctcgatgcacactggaaagatcggagtcttc
cctggaaactacatgagcccagtcagcagaacggcgtctgggagcaaccaacccaaagta
cccatgagtctttgcactcaggctggcagaggagtcaccatcgtcagtccttcctctgcc
tccctgggggctgttgttccagggcctgatttcaacaagcccccccctgcgtgctccaca
gctgcatcagcctgctcccaacctgcggctgtaacatcggctcagacagccacgggccag
cagccaaaagttcccctgcatgtcagctcccagatgactgtgaatcaggcgcgcaacgct
gtcagaacagctgcctgtcacagtcaggacagacccactgcagcggtgacgcccatccag
tctgtcacttacctcccacacgctgccatctgcccccagtctgcagccaacgctcagggc
tgcagccgggtaggagtcgcagtgggctgcgcggcctcttctctgaccccgcccaacgtc
agcgccgcgtctctggacggcgacgctttgagatccgttcctgttgggagcaacggcatc
ctcaatccctcgtccaacggcgctctcgcctgcagggtggacaaagatgtcaagagggaa
aagaaaagtcttctgaagctgttgtcctccaacaagaagaagtctcgcccttcaccaccc
tcctctcctaccctggaagcggagcaggctgcagctggagaggtgctgcacggtgctgtg
ggtcccgacacctcccctccctctggttcagtcagctgcctggaagctgagcctgctggt
gttgcttcgtcatcctcagtcccagagtcctctcatcggaggaccgctcctctcgacgga
tgtgctcccatcgcccctcctcctcggcagccctgctcctctctcttatcacagcaacat
gacgcacgtcccatcatatgtgagaggtacagggtggtggtatcgtatcccccgcagagc
gaggctgagctggaactgaaggaaggagacattgtgtttgttcacaggaagagggaggac
ggctggttcaaaggcacgctgcagaggaacggcaggaccggcctgttccccggcagcttt
gtagacagcatctaa
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