Cyprinodon tularosa (White Sands pupfish): 119774355
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Entry
119774355 CDS
T07496
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119774355 (lrba)
Membrane trafficking [BR:
ctul04131
]
Endosome - Lysosome transport
Others
Others
119774355 (lrba)
Endosome - Golgi transport
119774355 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
119774355 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
EIF3I
SUKH_6
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
119774355
NCBI-ProteinID:
XP_038127745
LinkDB
All DBs
Position
Unknown
AA seq
2934 aa
AA seq
DB search
MASAEAAGAAQPGDGKDGRSGSMQLNPAVPIRGIRMKFAVLAGLVEVGEVSNRDIVETVF
NLLVGGQFDLEMNFIIQEPESIVCMVELLDKCEPTCQAEIWSIFTAILKKSVRNLQACTE
VGLIQQVLHRIAATDNMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKGQWPPHAVKL
LAVLKHMAHRNGPDSFFSFPGKNAAAIALPPIARWPYQNGFTFHTWIRMDPLNNINVDKD
KPYLYCFRTSKGMGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHVYNR
WKNSEISCFVNGELASFGDIAWFVNTSDTFDKCFLGSSETADVNRVFCGQMGAVYLFAEA
LSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFTYNPCATDAQL
CLESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYYQPTS
KEPDTSVCYTLMSFMMELLKNSVSMQEQVLACKGFLVIGYTLEKSSKVHITRPVLDIVLA
FSRYLSSLQNGIYLLKQLCDHIMFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNAVRR
VGTVLQVMHTLKYYYWVVNPHDRSGVTPKGIDGPRPSQKEILSLRAFLLLFIKQLIMKDH
GVKEDELQSILNYLLTMHEDENLIDVLQLLVALMSEHPGTMVQAFDQRNGIRVIYKLLAS
KNEGIRVQALKVMGYFLRSLSPKRKSEVMLTSGLFSLLSERLMLHSNPFTMTTYNSLFEI
LTEQICTQVIHKQHPDPDSTVKILNPQILKVIAALLKNSPQSPESMEVRRVFLSDMIKLF
NNSRENRRSLLQCSVWQEWMLSLSFVNPRNNEEQKITEMVYAIFRILLYHAIKYEWGGWR
VWVDTLSITHSKVTFEQHKESLSRMFRQYQQQGSTSSRSTIRTISGVSQSSEDSKSVNGP
LAEEIAPSTAIKLTVNTEPQRSMESASSSTIASTPVEAAEERNTSSSNVTNIPPSTEQGQ
EVKMDESSGDQSNVDKETGATVMHQNVEKQEESVKPATEKSNEDPETAGSVQSGAAGANT
KEVVKDSVVSTNDDAETQDEKGDPPSTAEQHSGVSEEGDQVEQMSPEPSASLENSVLGGA
SVLNEDLVDVSSISDQINPSDVDDSQEDSSYVSAATGEEGELFKKEEDKQEEDGSKTKEL
QKEGTEMVDGKKELETVGKEAKEASVENQVSCSKSQTSPAETEDQSVKEPTKENVNDSQS
SSVAEGAATDQQASDVSAIPSVQDAPAAAEVTSQDPASKSSELTAEGTLAGAPDSSTASS
SSTTSKGSNSAPKTKEIKIARLDVANVAIDTERLELKETPAAESGQAASPGAAAGEAVSP
SGKAEDGSTSAPRSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQAWRSHSTKTVLDFVNS
SENVVFVHNSIHLISQVVDNLIMACGGILPLLSAATSASHELENIEPSQGLPVEASVTFL
QRLINLADVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVCAIAVRNCLECQQAQFKGAE
GSSRSYTVIPSTAVGTAKSASAQSPVDAVTGGVTTVRDLDRLLQDMDINRLRAVVFRDIE
DSKQAQFLALAVVYFISVLMVSKYRDILEPHNDRKHPLRSQSSRSTDSGAVSAGPEVENG
FSLRRYDSGIGEDHTSAAASEADLSSSGVTHGPDAISEALSTLSSEVRGAPSADSKSKNV
KDILRSLVSAPSEDVMVDPSLLPPSFLGSVSNFDRRSSPQFRSFDRSVVVAPKKAGTLSS
QVPSTSAQTSTAASVSGGTSVDSVAVVSSVDASQDPSEDSADAGGQVPASSSLPSVPPLS
PVTQNTAPNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGASLVCM
KSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFILS
RQRAEDIHKHAEFESNCAQYAAEKRDEEKMCDHLIRAAKFRDHMTSTQLIQKIINILTDK
HGAWGNVSISRPREFWRLDYWEDDLRRRRRFIRNPFGSSHSEATLKAAAEHAADTGAAEE
DILKQPIRGQALGNQNSESEMPLDGDDDTLSSLEDKDLENLTGPVNVSSSAQLIAPAAVV
KGTLSVTASELFFEVDEDDPSFKDIDPKVLSYTEGLHGKWLFTEIRAVFSRRYLLQNTAL
EVFMANRTAVMFNFPDAATVKKVVHSLPRVGVGTNFGLPQTRRISLATPKQLFKTSNMTQ
RWQRREISNFEYLMFLNTISGRTYNDLNQYPVFPWILTNYESPELDLTLPSNYRDLSKPI
GALNPKRAAFFSDRYESWEDDQVPKFHYGTHYSTSSFTLMWLLRIEPFTTFFLNFQGGKF
DHADRTFSSLSRAWRNCQRDTSDVKELIPEFFYLPEMFVNANNYNLGNMEDGTVVSDVDL
PPWAKSPEEFVRINRQALESEFVSCQLHQWIDLIFGYKQQGPEAARALNVFYYLTYEGAV
NLSSINDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVYLLLQTPLMFTEQMQQDV
IMVLKFPSNSPVTHVAANTQPGLASPAIITVTASRLFSVNKWHGLTGHQNTGEQQYQLPV
EIDPLIANNVGSHRRQISDLLDQSIQISSQCFVITADNRFILLCGFWDKSFRVYSTDTGK
LTQIVFGHRDVVTCLARSESYIGGDCYVLTGSRDATLLLWYWNGKHCSIGESPGTGFTTP
RAILTGHDCEVTCVSVCAELGLVISGCKEGPCLIHSMNGDLLRTLEAPENCLRPRLIHSS
TEGHCLIYYDKGQFCLFSVNGKLLRHMEVEDSIKAMHLSRDGQYLLTGGDGGVVSVWQVS
DFKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8805 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgcggaggcggcgggcgcagcgcagccaggtgatggaaaggacggccgatca
ggctccatgcagctcaaccccgcggtgcccatcaggggaatcaggatgaaattcgccgtg
ctggccggcctggtggaagttggggaagtttccaaccgagacatcgtggagactgtgttc
aacctgttggttggaggtcagtttgaccttgaaatgaacttcatcatccaggagccggag
agcatcgtgtgcatggtggagctgttggacaagtgtgaaccaacctgtcaggctgagatt
tggagcatcttcactgccatcttaaagaaaagtgtacgaaacctgcaggcgtgcactgaa
gtggggctaatccagcaggtgttgcacagaatagctgcaactgacaacatgattgcagac
ctgctggtggacatgttgggtgtgcttgccagctacagcatcacagtgaaagagctaaag
cttttcttcagcaagctgcaaggggaaaagggccagtggccgcctcatgcagtaaagctg
ttggccgttctaaagcacatggctcacaggaacggtccagactcattcttcagttttcct
gggaaaaatgcagcggctatagctctaccccccattgccagatggccgtaccagaatgga
ttcacattccacacatggatccgaatggatcctctaaacaacatcaacgtcgacaaagac
aagccttatctatactgcttccgcaccagtaaaggcatgggctactctgcacactttgtg
ggcggctgtttgatagtgacctcattaaaatcaaagggcaaagggttccagcactgtgtg
aagtacgacttcaaaccacagaagtggtacatggtgactctggttcacgtctacaatcga
tggaaaaacagcgaaataagctgctttgtgaacggagagctggcctcctttggagatatt
gcctggttcgtcaacaccagcgatactttcgacaagtgcttccttggatcatctgagacg
gcagacgtgaaccgtgtcttctgtggacagatgggggcagtttacctgtttgcagaggct
ctcagcgctgctcagatcctggccatctatcagctgggtcctggctaccagggcacattc
aagtacaaggcagagagtgacctgctatttgcagagcatcataagaccttgctgtacgac
gggaagctgtcctcttctattgccttcacctacaacccctgcgccactgatgcccagctc
tgccttgagtcctccccgaaggacaatgcctccatttttgtccattctccgcacgctctc
atgctacaggacgtgaaagctgtggtgactcactctgttcagagtggcattcactccatc
ggaggagtgcaggtcctcttccctctgtttgcacagctggattattaccagcccaccagc
aaagagcctgacacctctgtctgctacacgttgatgtccttcatgatggagctcttgaag
aactctgtgtctatgcaagagcaggtcctggcctgtaaaggctttctggtcattggctac
accctggagaagtcttccaaggtacacatcacacggcccgtcctggacattgttctggcc
ttctccagatacctgagcagcctgcagaatggcatctatttgcttaagcagctatgtgat
cacattatgttcaaccctgccatctggatccatgcccctgccaaggtgcagctgactctc
tacacgtacttggcgacagagtttatcagcacggtaaccatctacaacgcggttcgcagg
gtaggaaccgtgcttcaggtcatgcatacactaaagtactactactgggttgttaatcct
cacgaccgcagtggagtcacacctaaaggcattgatggtccaaggccaagtcagaaggag
atactctctttgagagcttttctgctgctgtttatcaagcagcttatcatgaaggatcat
ggtgtgaaggaagacgaactgcagagtatcctcaactacctccttaccatgcatgaggat
gaaaatctcatcgatgtgctgcagttgctggttgctctgatgtctgaacatcctggcact
atggtccaagcctttgaccagcggaatgggatacgtgttatttataagctcctggcgtca
aaaaatgaggggataagagtccaggcattaaaggtcatgggctacttcctgaggagcttg
tccccaaagaggaagtctgaggtcatgctgacttccggccttttttcgctgctctcagaa
cgcctgatgcttcactccaacccgttcaccatgacaacctacaacagcctctttgagatt
ttgaccgagcagatctgtactcaagtgatccacaagcaacatccagaccccgactccacc
gtgaagattctcaaccctcagatcctgaaggtaatcgctgctctcctaaagaactctccc
caatcgcctgagagtatggaagttcgcagggtgtttctgtcagacatgatcaaactgttc
aataacagccgagagaaccgcaggagcctgctgcagtgctcggtgtggcaggagtggatg
ctctccctgtccttcgtcaaccccagaaacaacgaggagcagaaaattactgagatggtg
tacgccatcttccgcatcctgctataccacgccatcaaatacgagtggggcggctggcgc
gtctgggtggacaccctgtccatcacccattccaaggtgacatttgagcagcacaaagaa
agtttgtcccgcatgttccgtcagtaccagcagcagggctctacaagctctcggagcacc
atccgtaccatctctggtgtcagccaaagctctgaagactcgaaatctgttaacgggcca
cttgctgaagagatagcaccctcaacggccatcaagctcacagtaaacacagagcctcaa
cgttccatggagtctgcatctagttccactattgcctcaacaccagtggaggctgcagag
gaaagaaacacttcatccagcaatgtgaccaacatcccacccagcaccgagcaagggcag
gaagtgaaaatggacgagtcctctggagatcaatcaaatgttgacaaagaaactggagct
actgtgatgcaccaaaatgtagaaaaacaggaggaatcagttaaaccagcaaccgagaag
agcaacgaggatccagaaacggctggaagtgttcagagtggagctgctggtgcaaatacc
aaggaggtggtgaaagactctgttgtttcaaccaatgatgatgcagagacccaggatgaa
aaaggtgatccaccttctacagcagaacaacattctggggtgtctgaagaaggagaccag
gttgagcaaatgtcccctgaaccttcagcttctctggagaacagtgttctgggcggagcc
tctgtcttaaacgaggacttggttgacgtgtcgtcaatcagtgaccagattaacccaagc
gatgtagatgatagtcaagaagattcctcctatgtttcagctgctacaggagaggaagga
gaactatttaaaaaagaggaagataagcaagaagaagatggtagcaaaacaaaagagctc
caaaaagaagggacagaaatggtcgatggcaaaaaggaattagagactgttgggaaagaa
gcaaaggaagcatctgtagagaatcaggtgtcttgctcaaaaagtcagacatctcccgct
gaaacagaggatcaaagtgtcaaagaacccaccaaagaaaatgtaaatgattcacagtct
tcctctgtagcggaaggtgctgctacagaccagcaggcctcagatgtttcagcaattcct
tcagtccaggacgctcctgcagctgcagaggtaacctcacaagacccagcttcaaagtcc
agtgagctcactgcagaggggaccctcgctggtgcccccgacagcagcactgccagctct
agctctaccaccagcaagggctcaaattctgcccccaagaccaaagagattaaaatcgcc
cgacttgacgtggcaaacgtggccatcgatacagagagacttgaactgaaggagacccct
gccgcagaatcaggccaagcagcatcaccaggagcagcagcaggtgaagcagtaagtcca
tcaggcaaagcagaagatggcagcacctcggctcctcgctccaccatgttccgcatccca
gagttccgctggtcccacatgcaccagcgcctcctaactgacctacttttctccattgag
acagatgtgcaggcgtggaggagccactccactaaaacagtcctggactttgtgaacagc
agcgagaacgttgtttttgtccacaacagtattcatcttatctcccaggttgtggacaat
cttatcatggcttgtggaggtattttacctctgctgtctgctgccacgtctgcctcgcat
gaactggagaacattgagccgtcccagggtctgccagtggaggcttcggtcaccttctta
cagcgcctcatcaacctcgcagacgtgctcatcttcgccagctccttaaactttaccgag
attgaagctgagaaaaacatgtcatcagggggaatcctgcgtcagtgccttcgccttgtg
tgtgctatagcagtcagaaactgcttggagtgtcagcaagcccagtttaaaggtgcagag
ggttcatcaagaagctacaccgtcattcccagcaccgcagttggaaccgccaagtctgca
tctgcacagagtcctgtggatgcagtgacgggtggtgtgacaacagtcagagatctggac
cggcttcttcaggacatggacattaaccgcctcagggccgtcgtgttcagagatattgag
gacagcaagcaggctcagtttcttgcgctagcagtggtctacttcatctcagtcctcatg
gtgtcaaagtatcgtgacatcctggagccccacaatgacaggaaacaccctcttcgctcg
cagtcttccaggagcacagacagcggcgcggtttcagctggacccgaagtggaaaacggc
ttctctctgagacgctatgattcagggatcggtgaagaccacacctcggctgcagcgagc
gaggccgatctctcatcctcaggtgtaacgcacggtccagacgccatctcagaagcgctg
tccactctctcttctgaggtcagaggagcaccttctgctgactcaaagtcgaagaatgta
aaggacatcctgcgcagcttggtgagcgcgccgtccgaagacgtaatggtggaccccagt
ctgctgcccccgtcgtttttgggatctgtgagcaacttcgacaggcgatcatcaccacag
tttcgctcatttgatagaagtgtcgtcgttgcgccgaagaaagcgggcacgttgtcgtct
caagtgccttctacctccgcccagacctccactgctgcttcagtctctggtggaacttca
gttgacagtgttgctgtggtttcttcagttgatgcctcccaggatccttctgaggactcg
gctgatgcaggaggccaggttccagccagctctagcctgccatctgtccccccactctcc
cctgtgacccagaacacagcccccaatatgagtatctcggagcgtttggagcacgcgctg
gaaaaagcagctcctctgctgagagagatctttgtggactttgctccatttctctctcgg
actctgctgggcagccatggtcaggagctgctcatcgagggcgccagcttggtgtgcatg
aagtccagcagctctgtggtggagctcgtcatgctgctttgttctcaggaatggcagaac
tccatccagaagaatgctggcctggcctttatcgagctggtcaacgaaggcaggcttctg
agtcacacaatgaaggaccacctggttcgtgttgcgaatgaggcagagtttatcctgagc
agacaaagggctgaagatattcacaagcatgcagaatttgagtccaactgtgctcagtat
gcagcagaaaagcgcgatgaggagaaaatgtgcgaccatttgatcagagctgccaaattt
cgtgaccacatgacttccactcagctcatccagaagataatcaacattctgactgacaaa
cacggagcctggggaaatgtgtctatcagccggccgagggagttctggcgcctggactac
tgggaggacgatttaaggcggcgacgtcgcttcatcaggaacccctttggatccagtcac
tcagaagctacgctcaaagcagcagctgaacatgcggctgatactggagcagctgaggag
gacattctcaagcagcccatcagaggtcaggctctggggaatcaaaactctgagagcgag
atgccactggatggagacgatgacactctgtcgtccttagaggacaaggacctggagaac
ctaacaggcccagtaaatgtgagcagcagcgctcagctcatcgctccggctgccgtggtg
aaaggcaccctgtcggtcaccgcctctgagctctttttcgaggtggatgaagacgatccg
agctttaaggacatcgatccaaaggttttgtcctacacagaaggtcttcatggaaaatgg
ctgttcacagagatccgtgctgtcttctccagacgctacctgctgcagaacactgctctg
gaagtgttcatggcaaacagaacggccgtcatgttcaacttcccagatgcagctacagta
aagaaggtggtccacagccttcctcgtgttggagtgggcacgaactttggcctacctcag
acccgacgcatctctctggccacacccaagcagctcttcaagacatccaatatgacacag
cgatggcaacgccgtgagatatccaactttgagtacctgatgtttctgaacactatctct
ggtcgtacctataatgatcttaaccagtacccagtcttcccctggattctcacaaactat
gagtcaccagaactggaccttactcttcccagcaactacagagatctgtccaagcctatt
ggagctctgaaccccaagagggcagccttcttctcagataggtatgagtcctgggaggat
gatcaggtgccgaagtttcactatgggacccactactccacctccagcttcaccctgatg
tggctgctacgcatcgaacccttcaccacattcttccttaactttcaaggagggaagttt
gaccatgcagaccgcaccttctcctcattgtccagggcctggaggaattgccagagagac
acatctgatgttaaggaattgatcccagagttcttctatctgcctgagatgtttgtcaac
gccaacaactacaacctgggaaatatggaggatggcactgtggtctctgatgtggatctt
ccaccttgggccaaaagcccagaggagtttgttcgcattaaccgacaggctctggagagt
gagtttgtgtcctgccagcttcaccagtggattgacctgattttcggctacaagcagcag
ggaccagaggccgctagagctctcaatgtcttctactatctaacgtatgaaggtgcggtc
aacctgagctccatcaacgacccgatgctcagagaggctgtggagtcccagatcaggagc
tttggacagactccttgtcagttgcttattgaaccgcacccacctcgaagttcagccatg
caagtatatcttctcctgcagactccgctgatgtttacggagcagatgcagcaggatgtt
atcatggtgctgaagttcccatccaattctccagtgacacatgtcgcagccaatactcag
cctggtcttgcgtcacctgccatcatcacggtcactgccagtcgcctcttttctgtaaac
aaatggcatggcctgacaggtcatcagaacactggggagcagcagtaccaacttcctgtg
gaaattgaccctctgatagcaaataacgtgggctctcatcggcgtcagatctcagacctt
ctggatcagagcatccagatcagctcgcagtgttttgtcatcactgccgacaaccgcttc
atcctgctgtgtggcttctgggacaagagcttccgggtttactctactgacacagggaag
ctgactcagatagtgttcggacacagggacgtggtgacgtgtcttgctcgctccgagtca
tacatcggaggagactgctacgtcctgactggttccagagatgctaccctgctgctgtgg
tactggaatggaaagcactgcagcatcggggagagcccagggacagggtttaccacacca
agagccatcctgaccggccatgactgcgaggttacctgtgtcagcgtgtgtgccgagttg
ggtcttgtcatcagtggctgcaaagagggtccttgtctgatccattccatgaatggagac
ctgcttcggacccttgaggcccctgagaactgtctgcgtcccagactcatccattcctcc
accgaaggccattgcttgatttattacgacaaagggcagttctgtctcttcagcgttaat
ggcaaactgctcagacacatggaagtggaagacagcatcaaggccatgcatctgagtcga
gacggtcagtatctactgacaggtggagatggaggtgttgtgtccgtctggcaggtctct
gacttcaaacagctcttcacctaccctggctgtgacgcaggaatccgatccatggcgatg
tcacatgaccaacggtgcatcatcaccggcatggcatcaggcagcatcgtcctcttctac
aacgacttcaacaggtggcatcatgagtaccagaccagatactga
DBGET
integrated database retrieval system
