Cyprinodon tularosa (White Sands pupfish): 119774425
Help
Entry
119774425 CDS
T07496
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04010
MAPK signaling pathway
ctul04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119774425
04020 Calcium signaling pathway
119774425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119774425
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119774425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119774425
NCBI-ProteinID:
XP_038127867
LinkDB
All DBs
Position
Unknown
AA seq
2490 aa
AA seq
DB search
MTDGEGRARFQYEECPEQREVLEDVRLSVSAAHWTDSPGHDVDQDRQKGEGQEEEQKQEE
EKEEVEKERRQSCSVRGERRDEWRAEVQECEEEQEPELEVEAGPTLGVRITAPIRDPDCV
SEEEEQQPYPALASVAFFCLKQTTRPRNWCLRMVCNPWFEHVSMLVILLNCVTLGMFQPC
EDVSCLSEWCRILQVLDDCIFAFFALEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGV
MEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFI
FGIVGVQLWAGLLRNRCFLGEDIITLYNLSINPYYMSEEGEDSPFICSAPRENGMLRCHN
VPPFNQRGEDCSLPAPHHSSSLIGSPPGAGGTSNSSCVNWNQYYNVCRPGDLNPHKGAVN
FDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIAT
QFSETKQRENALMREQRARYLSNDSTLASYSEPGSCYEEMLRYISHLYRKFRRRLQRMYY
GWHSKRRKKVNPNGGGIGSNGGGNGHGQGSSRGSGPGTALWLRPIHNLLQHHQHQHCRLS
NGGQHTINTTTAEHTDREGRVKRGDELEMTSLSVTRESTNGDNPPDVSQGMGALLGQLNG
GMNYPTILPSFVCSYSSKTPPPHSKQCGRIPEQHPLNHPASEHTEALSKLYQLMGQHSRQ
KLLFQLAGVVPSPLLLELLSCPMCARSLETLELELGDLEGGKAEADGLHDFQQGCDLRGL
RRRFRRCEVVEYKNGVFRAWKDFREKLRRIVESKYFNRGIMIAILVNTLSMGIEYHEQPE
ELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQADGG
LSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGC
KFSLRMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALM
TFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFDEDEKVEQLRDTELKMYSLML
TANGHVDPRGIMAPPIIMHTAATPMPTPKGSLGPESVLGEELMYREGINQHGEAGLGVSE
IGSHAESRRGSSTSMDPSTYDQRSPNLSSPGRRSPLPLRGSISSWGSRRSSWNSLGRAPS
LKRRDTSGERESLLSGEGGEEEECQDQQEEGVVKNRLRLENLEPLQASSLCPAIMAEYGD
CNGRTVTYDPNGNSDPKDDYTSEDDLDDDSPFCYWIRRELHNMKPRWCKEHENWTLYLFS
PESPVRMWCQAVITHKLFDHVVLVFIFLNCITIALERPDIQIHSTERVFLSVSNYIFTVI
FLAEMAVKVVALGFCFGDQSYLKSSWNILDGVLVFVSMVDILVSLAYTGTNRILGILRVL
RLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYH
CEGLDTRNITNKSDCLQANYKWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVG
VDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRL
KMIDKKRRSKENGGAEAKQRPYYADYSPLRLTIHTLCTSHYLDLFITFIICINVFTMSIE
HYNQPQYLEEVLKYCNYVFTIIFVIEALLKLVAFGFHRFFKDRWNQLDVGIVALSIMGIT
LEELKMKAALPINPTIIRIMRVLRIARVLKLLKMAKGMRALLDTVMQALPQVGNLGLLFM
LLFFIYAALGVELFGKLECSDSNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDT
LRECQPHESHCLSYLPWVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMD
AEIALEMEEERQRRQSTGSNNSSMGGTYIGPCPNSLEEEEDLQYSDQDQLSSGKMSVSRM
HSLPNDSYMFQPVRPASAPYPLKEVDVSSQYQHAASVVSVQSQPCESRSLLQVPDASPLH
PQSTPSLTLPRIAPPTPGPSPRALHRQGAVKVDSVESQSCEQQERSSSAHLPSRSSSSLS
PLPPLCSSSSALPPCSKSPSSLPPSPSSLLPLPYTPSFLLPPPPSTRLPSRSSSLRRPRA
PSAISLSDPADAEVYHITSSARHRWRDEEGGEQDNRRKAGRSHSLSPYGSPHSLDLIPTL
PPPSNRSTLSLLGEGSKDIKKGFSVDNHGFLEKPQSEPAGPLDEQRRHSIEVCLPKAVIT
TDSQSFTLETHRSDKGTQAFPVRVQSVGGRQRKKKTSPPCISIHPPAEKEQPLLPSPPKL
ADCSMMLRRRTPSNDLTLHSDTPADGQLRTQMQTPLTPIHVPLDAHSPSHTLTPSKGSTQ
THTPPPHIPISPNVFIQPHAPLLPTVMPFSQPVMRHSPLAGDCIPLPRFTYDQPQSRYTG
EPESAACSSPFNNRLGSSPGFSAKNRRTAQ
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagcgcggtttcagtacgaagagtgcccagagcagagggag
gtgctggaggacgtgaggctttctgtatcagcagcccactggaccgactccccaggtcat
gatgttgaccaagatagacaaaaaggagaaggccaagaagaggagcaaaaacaggaggag
gagaaggaggaggtggagaaggaaaggagacagagctgtagtgttcgaggagaaaggaga
gacgaatggagagctgaagttcaggaatgtgaggaggagcaggagccagagctggaagta
gaagctgggcctacgctgggagtccgtatcacagcaccaatccgtgacccggactgtgtg
tccgaggaggaggagcagcagccatatccggccctggcttctgtggctttcttttgcctg
aagcaaacaacaagaccccgcaactggtgtcttcgcatggtctgtaacccgtggttcgag
cacgtgtctatgctggtgatcctgttaaactgtgtgaccctggggatgtttcagccttgc
gaggatgttagctgcctgtcagagtggtgtcgtatcttgcaggtactggatgattgcatc
ttcgctttctttgcgttggaaatggtcataaagatggtggctcttggaatttttggcccc
aattgttacctcggcgacaaatggaaccagctcgacttcgtcattgttatggcaggggtg
atggagtattccctggatggccacaatgccagtctgtcagcaatccgtactgttcgagta
ctcaggccactgcgggctatcaacagagtaccaagtatgaggatcttggtgacgctgctg
ctggacaccttacccatgctgggaaatgtgctccttctctgcttctttgtcttttttata
tttggcattgtgggagtccaactgtgggccggactgctgcgcaaccgctgcttcctggga
gaagacataataacgctttacaacctctccataaacccatactacatgtctgaggaaggt
gaagacagcccatttatctgctctgctcccagagagaacgggatgctgcgctgccataat
gtaccgccctttaaccagagaggagaggattgctcgttacctgctccccatcacagttct
tctctcattggttcaccacctggagcaggtgggacgagcaatagcagctgtgttaactgg
aaccagtactacaacgtctgccgcccaggggacctcaacccccataagggagcagttaac
tttgacaatattggctacgcatggatagctatattccaggtcatcacactggaaggatgg
gtggacatcatgtattacgtcatggatgctcactccttctacaattttatatattttata
ctgctcattattgtgggctctttcttcatgataaatttgtgcctcgtggtcatcgccacc
cagttttctgagacaaagcaaagagaaaacgccttgatgagggagcaacgtgctcgctac
ttgtctaatgattcaactctagccagttacagtgagccaggctcatgctatgaggagatg
ctacgatatatcagtcatctttacaggaagttcaggcgcaggctgcagagaatgtactat
ggatggcacagcaaaaggcgtaaaaaggtgaaccctaatggcggtggaattggcagtaat
ggtggtgggaacggacatggccaaggttccagcaggggttcaggacctggcacagcatta
tggctgaggccaattcataacctcctgcagcaccatcaacaccaacactgtcgtctcagc
aacggtggacagcacacaatcaacaccacaactgctgagcacacggatcgggaaggccgt
gttaaaagaggggatgagttggagatgacgtctctttctgttacaagagaaagtacaaac
ggcgataatcctcctgatgtctctcagggaatgggtgccctgcttgggcaactaaacggg
gggatgaactatcctaccattctgccatcttttgtgtgcagctacagtagtaagacgccg
ccccctcactcgaagcagtgcgggcgcattccagagcaacatccattgaaccatccagcg
tctgagcacacagaagccctgagcaagctttaccagctaatgggacagcacagtcgtcag
aaactgctttttcagctggcaggcgtggtgcccagccctctgcttttggagttgcttagc
tgccctatgtgtgcccgcagtctagagaccctggaactggaactgggagacctggaaggg
ggtaaagcagaggcagatggactacatgactttcaacaggggtgtgatctaagaggactg
cgacgtcggtttcgacggtgtgaagttgtggaatacaaaaacggagtgtttcgggcctgg
aaggactttagggaaaaattgaggagaattgttgaaagtaaatacttcaaccggggaatt
atgattgccatcctcgtcaataccctcagcatgggaatagagtaccatgaacagcctgaa
gaactgacggatgtgttggagattagtaacattgttttcaccagcatgtttgtgctggag
atgggcttcatgcttctggctttcggtttgtttggatacattcgaaacccttacaacatc
tttgacagcattattgtcatcataagtgtgtgggagataattggtcaagcggatggaggt
ttgtcagtcctgcggacttttcgcctgttgcgagtgctgaagctcgtacgctttctacct
gccctgaggaggcagctggtggtgttgatgaagaccatggacaatgtggccaccttctgc
atgctgctgatgcttttcatcttcactttcagcattcttggcatgcatctttttggatgt
aaatttagtctaagaatggagaacggggacaccattcctgatcgcaaaaactttgactct
ctactctgggccatcgtcactgtatttcagatccttacccaggaggactggaacgtggtg
ctgtataatggcatggcttctacctctccatgggcagctctctacttcgtagctctcatg
acgtttggcaattatgtgctcttcaatttattggttgccattttggttgaaggcttccag
gctgagggtgatgccaatcggtcagagtcagatgacgaaaagaaatctgacaactttgat
gaagatgaaaaagtcgaacaactcagagatacagagctcaaaatgtactctctgatgctg
acagccaacggtcatgttgaccctcgtggcataatggctccacccataataatgcacaca
gcagccactcccatgccaacacctaagggctccctaggtcctgagtctgtcttaggggag
gaactgatgtacagagaaggaataaatcaacatggagaagctggactgggcgtttctgaa
atagggagtcatgcggagtctcggcgtggaagctcaacatcaatggacccatcaacctat
gaccagcgctctcctaatctctcaagccctggacggcgctcacctcttcctctccgtggt
tccatcagctcatggggaagtcgccgctccagctggaacagtctggggagagcaccaagc
ctgaaaaggcgagacaccagtggagagagggaaagtttattgtccggagaaggtggtgaa
gaggaagagtgccaagatcaacaggaggaaggtgtggtaaagaacagattgaggctggag
aacctggagccgctgcaagcatcttctctttgccctgccataatggcagagtatggcgac
tgcaatgggagaactgtgacatatgatccgaacggaaactcagaccctaaagatgactat
acgtccgaggatgacttggatgatgatagtcctttctgctactggatcaggagggagctc
cataacatgaaaccccggtggtgtaaggaacacgaaaactggacactatatttgttctca
ccagagagcccagtccgtatgtggtgccaagcggtgatcactcacaaattgttcgaccat
gtggttctggttttcatctttctcaactgcatcactatcgctctggagaggcctgatata
cagattcatagcacggagcgagtgtttctaagtgtgtccaactatattttcactgtgatc
ttcctggcagagatggcagtcaaggttgtagctcttggtttctgtttcggggatcagagc
taccttaagtcaagttggaacattttggatggagttttggtttttgtgtccatggtggac
atcctggtctctctggcctacactggtaccaacaggatcctggggattctcagagtcctt
cgtcttctacgcacccttcgccctctaagggttatcagccgtgccccaggactgaagctg
gttgtggagacactcatcacatctcttagacctattgggaacattgtgttgatctgctgc
gccttcttcattgtgtttggaatcttgggggtccagctgttcaaaggaaagttttaccac
tgtgagggtctggacaccaggaacatcacaaacaagtcagactgtctacaggccaactac
aagtggatccgaaggaagtacaattttgacaacttgattcaggctttgatgtctttgttt
gtactgtcatgtaaagatggctgggtcaacattatgtacgatggactggatgcagttggg
gtcgatcagcagcctgtgaggaaccacaacccctggatgctgctctacttcatctccttc
ctgctgattgtcagtttcttcgttctcaacatgtttgttggagtggttgtggaaaacttc
cacaagtgccggcaggaccaggaggaggaggaggcccgtttacgagaggagaagaggctc
aaaatgatagataaaaagcgcaggagtaaggagaatggaggggctgaggctaaacagaga
ccttactatgccgactactcacctttgcggctgaccatccatactctttgcacaagccac
tacctggacctcttcatcacctttatcatttgcattaatgtcttcacaatgagcattgag
cattacaatcagccacagtatttggaggaggttttgaagtactgcaactatgttttcacc
atcatcttcgtcattgaggctctgctgaaacttgtggcctttggcttccacaggttcttc
aaagacaggtggaatcaactagatgttgggatagttgccttgtctataatgggtatcact
ctggaagaactgaagatgaaagctgctttgccaataaatcctaccatcatccgaatcatg
agagtattgaggattgcacgagtgctaaaacttctgaagatggcaaaaggaatgagagct
ctgctggatactgtcatgcaggcgctgccacaggtgggaaatcttggtctcctcttcatg
ttgctcttcttcatctacgctgctctgggagtggagctctttggcaaactggagtgcagc
gatagcaacccatgtgagggcctaagtcgtcacgccacatttgagaatttcgggatggcc
ttcctcactttgtttcgagtttccacaggagacaactggaacgggattatgaaagacact
ttaagggagtgccagccacatgaaagccactgtttatcatacctaccctgggtgtctccg
atatactttgtcaccttcgtgctcatggcccagtttgttttggtcaatgtggtggtggct
gttttgatgaaacatctagaggaaagcaacaaggaagccaaagaggatgcagagatggat
gcagaaattgcattggaaatggaagaggagaggcaacgcagacaaagcacaggatccaac
aatagctctatgggagggacttatattgggccatgcccaaattcacttgaggaggaagaa
gacctgcagtacagcgatcaggaccagctgtcgtcaggcaagatgtctgtgtctaggatg
cattctttgccaaatgacagctatatgtttcaacctgtgcgccctgccagtgccccctat
cctttaaaggaggtagatgtcagttcccagtaccagcatgcagcctctgtagtgtcggtc
caatcccagccctgtgagagccgctctttgctgcaggttccagatgcatcccctcttcat
ccccagtctactccctccctcactttaccccgcattgccccgccaacacctggcccctca
ccacgggccctgcacagacagggggcagttaaagtcgattctgtggaatcccagagctgt
gagcaacaggagaggtccagctcagctcatctaccttcccgctcatcttcctctctctcc
ccattaccccctctgtgctcttcctcctcagccctccccccatgctccaaatctccctct
tctcttcctccatcgccatcctctctcctgcctctcccatacactccatcctttctactc
cctccacctccctcaacacgcctgccctctcgctccagcagtcttcgcaggcccagggcc
ccatctgccatttcactttcggacccggccgacgcagaggtgtatcatatcaccagctcc
gctcgccataggtggagggatgaggagggaggggaacaggacaacagacggaaggcaggc
cgcagccactctctgtccccttacggctcaccacactccctagatttgattcccacgctg
ccccctccatccaacagaagcaccctcagtctgctcggggaaggatcaaaagacatcaag
aaaggctttagtgttgataaccatggcttcctggagaaacctcagtcagagccagcaggt
cccttggatgaacagcggcgtcactctatcgaggtttgcctcccaaaggccgtcataacc
actgacagccaaagttttacgctggagacccaccggtcagataaaggcactcaggccttt
ccagtgagggtgcaatcagttggtggtaggcaacgaaagaagaagacaagccctccctgc
atatccatccacccacctgcagaaaaggaacagcccctgctaccctcacctccaaagcta
gctgactgcagcatgatgcttcggcgtaggacaccatccaacgacttaacgctgcattca
gacacgcctgcagatgggcagctccgcacacagatgcaaacaccactaacaccaatccac
gtgccactggacgcacattcaccgtcacacacactgaccccatcaaagggatccacccag
acacacacacccccgcctcacatccccatcagcccaaatgtcttcattcaaccccatgca
cctcttctaccaaccgttatgcctttctcacagcctgtcatgaggcactcccccctcgca
ggagactgcatcccgttaccccggttcacctatgaccaaccacagtccaggtacacaggc
gagccagaatctgctgcctgctcttcccctttcaacaacagactgggaagcagtcctggt
tttagcgcaaagaatcggaggaccgcccagtga
DBGET
integrated database retrieval system
