Cyprinodon tularosa (White Sands pupfish): 119774620
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Entry
119774620 CDS
T07496
Symbol
rnf220b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119774620 (rnf220b)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119774620 (rnf220b)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119774620 (rnf220b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
Pox_A_type_inc
zf-RING_2
Endonuclease_7
zf-RING_UBOX
zf_C2H2_ZNF598
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
119774620
NCBI-ProteinID:
XP_038128153
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MDLHRSFKMDSPSYLPTPLASPALMVLASTAEASRDASVPCQAPRPFGIPVSVEKDLHLP
FPSPSYTFASMYQRQAPMSGTFTSRDFPTSLLHLHPQFTPPNLDCSPLGMLNHSGLGAFR
PFASPQEERESGGYQSAFTPAKRMKGCFPETEGKEFDFGPLKTGEETGRKLFSMSGLLSD
GEASSSPEEHKEHSKVKSLYDTQAPVCPVCQAVLRPGELQDHMEQELSKLAQLQISLPGL
QHDHLIRTPKSLSFSLHIKREGGSPTSPSRPSEEPHSDRYQTFLRVRANRHTRLNVDDLC
WCRCYVKSTPLRPHSAGAHLDCIQAVKIGKLKRRKPEEGQEGSADLVPAEDEWNERRRTQ
MAAVGFKGATLVSTTSKECRDSDADLDVDGDDTLEYGRAQYSELDVIPCSAESSKEKAGN
SSMLADSRLKLDFSKWSNDGSPSTSSGEKQDPSIASLPRTCRNTEIEPLSEDSTPTTLEA
LKARIRDLEKQLSKGDRFKCLICMDTYTTPLTSIQCWHVHCEECWLRTLGAKKLCPQCNT
ITSPGDLRRVYL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggatctccatcgctccttcaagatggacagcccctcctatctccctactcccctggcc
tctccagccctgatggtcctggcatccacagcagaggccagcagggatgcctctgtcccc
tgccaggctcccaggcctttcggaatcccggtctctgtggaaaaggacctccacctcccc
tttccctcaccttcctacaccttcgcttccatgtaccagcgtcaggctcccatgtcgggt
acgtttacgtcccgggactttccaacatccctgcttcacctgcaccctcagttcacacct
ccaaacctggactgttcccccctggggatgctcaaccacagtgggttgggggcgttccga
ccttttgcatccccgcaagaggaaagagaatcaggggggtaccagtcggccttcactcct
gccaagaggatgaagggctgcttcccagaaacagaagggaaagagtttgactttggaccc
ctgaaaactggagaggaaacaggaaggaagttgttctccatgtctggcctgctatctgac
ggggaggcttcatcaagcccagaggagcacaaagagcacagtaaggtgaaaagtctctat
gacactcaggccccagtgtgtccggtctgccaggccgtactgcgaccaggagagctgcag
gatcacatggagcaagagctgtccaaacttgcccagctacaaatcagcctccctggattg
cagcatgaccatctcataaggacaccaaagtctctttccttctctctgcacatcaagcgt
gaaggaggctctcccacttcaccctctcggccttccgaggaaccccactcagaccgatac
cagacgtttctcagagtgcgagccaacagacatacacgactaaatgtcgacgacctctgc
tggtgcaggtgctacgtcaaatccaccccattacgcccacacagcgcaggagcccatcta
gactgcatacaagctgtcaaaattgggaagctgaagaggagaaaacctgaggaaggacag
gagggatcagcagacttggtgcctgcagaggacgagtggaatgagaggagaaggacacag
atggcagctgtaggttttaaaggtgcaacgctagtgagtacgacttctaaggagtgtcgg
gacagcgatgcagacctggacgttgatggggacgatactctggagtacggcagggcgcaa
tatagtgaactggatgtaatcccctgctcagcagaaagctcaaaagagaaagcaggaaac
agcagcatgttggctgattccagactgaagctcgacttttccaaatggtcaaatgatggg
agtccttctacaagtagtggggagaagcaggaccccagtatagccagtcttcccagaacc
tgcagaaacacagagatagagccgctttcagaggactccacgccgacaacgctggaagcg
cttaaagcacggatccgggatttggagaagcagctgtctaaaggagacagatttaaatgc
ctcatctgcatggacacatacacaacaccgctcacctccatccagtgctggcatgtccac
tgtgaggagtgctggctgcggacgttgggggcaaagaagttgtgtcctcagtgcaatacc
ataacatcacctggagacctgaggcgggtgtatctgtag
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