Cyprinodon tularosa (White Sands pupfish): 119774688
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Entry
119774688 CDS
T07496
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119774688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119774688
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
119774688
REST complex
119774688
Heterochromatin formation proteins
Other heterochromatin formation proteins
119774688
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
119774688
NCBI-ProteinID:
XP_038128260
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MKRRAEEPEPIFVQQQPRRPLVQGAGEVFQPRALVTAPPVVEAPADTMQPSTGIQYSLPQ
AYQVPTMPQSTSGLGHNSTTPHIGPHAQSPAVLSQGPAAVPAHVHPPTPLSSVQGQQQQF
QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDL
IMGFNTFLPPGYKIEVQTNDQVNVTTPGQIHYITPQGISVQNITAAGASSTPSNQHQSLP
QTNLHTTTTPTIATQPALNKASKLIQSPAHTPTSQPNPSIPSYASPGSPSVQPHTAISST
PSSGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNY
TPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSVLLGKSPPDRAESVRNDHGPTVK
RPSLNNKQRINPNGLPIRRPGGVGSTPPFKKKALVIGKSHSMAEVSKLSTSTETMFFEKV
KKALRSSESYDNFLRCLHIFNQEVISRTELVQLVIPFLGKFPELFTWFKNFLGYRESSHG
ELSHVESLPKERSTEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCREVLNDTW
VSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDIVLENNLSTIRALETVQRRLSRMSA
EEQLRFRLDNTMGGSSEVIHRKAIQRIYGEKAPDIIDGLKRNPAVSVPIVLKRLKMKEEE
WKEAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIEMLYEDRQERAS
EETATPPPSGPHITLTYDDSQILEDAAALIIHHVKRQVGIQKEDKFKIKQIIHHFIPDLL
FARRGELSDLEEEDEEEEEEEMETNQDTPKKHNGLPGRSPSKSKLLFTNTAAQKLKATDD
AYNLFFVNNYWYVFFRLHHILCSRLLRIYGQAEKQIEEDNKEREWEREVLGLKRDKNENP
AVQLKMKEPMDVDVEDYYSVFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYIAFTMDKLI
QNIVRQLQHLVTDDICVRVTDMYLSESAKKATGGTISTQTSRATAEGAYQRKAEQLMSDE
NSFKLMFMKNRGTVSLGIELLDTEEENSDEPADAEKWSDYVSRYLNSDSASPELREHLAQ
KPVFLPRNLRRIRKCQRGWEQLQQERITKGASDKSQDGSSELKMQCMFKLNSYKMVYVCK
SEDYMYRHTALSRAHQSHQRVNTRLHGRFQTWLDTWAQKHVTSEMAASTHEWLMGDAKEG
LLSCTTTCSPEILHYLKINKYWVQYRTL
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgcgcagaagagccagagcccatttttgtgcaacagcaacctcgtcgtccc
ctagttcaaggtgctggagaagtctttcagccaagggcccttgtcacggccccgcctgtg
gttgaggcccctgccgacaccatgcagccctcaactggcatccagtactccctccctcag
gcctaccaggtacctactatgcctcaaagcacaagtggacttggacacaacagtaccact
cctcatattggccctcatgcacaaagcccagctgtactgtcgcagggaccggcagcggtt
ccagctcacgttcatccacctacacccttatcttcagtgcaaggacaacagcagcagttt
cagagattaaaggttgaagatgccctgtcttatctggatcaagtgaaactgcagtttggg
aatcagcctcaagtttataatgattttctcgacattatgaaagaatttaaatcccaaagc
atagacactcctggagtcatcaaccgtgtatctcagctctttaagggccacccagacctg
attatggggtttaacactttcctgcctcctggttataagatcgaggttcaaaccaacgat
caggtcaatgtaacaacaccgggtcagatacactacataactcctcaaggcatttctgta
caaaacatcacagcagctggagcatccagcacaccatctaaccagcaccagagtctccca
cagaccaacctgcataccaccaccacccctacaatcgccactcagcctgctttaaacaaa
gccagcaagcttattcagtctccagcccacacccccaccagccagccaaatccatccatc
ccatcgtatgcctcaccaggttctccttcggtccagccacacactgccatcagcagcaca
ccatccagcggaccgcctctccagaataaccagccagtggagtttaaccacgccatcaat
tatgtcaacaagatcaagaaccgcttccagggccagccagatatctacaaagccttcctg
gaaatcctgcacacgtaccagaaagaacagcgaaatgctaaagaggctggtggtaactac
acgccagctctgactgaacaggaagtctacactcaagtggccagactttttaagaaccag
gaggacctgctgtcagagtttggacagttcctgccagatgctaacagctcagtgctgctg
gggaagagtccacctgacagagcagagtcggtccgtaatgatcacggtcccacagtaaag
agaccctcactgaacaacaaacaaagaataaatccgaatggtctgccaatcaggagacct
ggtggggttggatccacacctcctttcaagaaaaaggcgcttgtcatcgggaagagccac
agcatggctgaagtcagtaaactcagcacaagcactgaaactatgttctttgagaaggtt
aaaaaggctctgcgcagctcggagtcctatgacaacttcctccgatgtctgcacattttc
aatcaggaagtgatttctcgcactgagctggtccagttagttatcccatttcttggaaaa
ttccctgagctttttacttggtttaagaacttcttgggctacagagagtctagtcatggg
gagttgagtcatgtggagagtttacccaaagaacgttctaccgagggtatagctatggag
atcgattacgcttcctgcaagaggctggggtccagctacagagctctgccaaagagctat
cagcaacccaagtgcacaggaagaacgccactgtgcagagaggttttgaatgatacctgg
gtgtcttttccgtcgtggtcggaagattccacattcgtgagctccaagaagactcaatat
gaggagcatatttacagatgtgaagatgagcgctttgagctggacatcgtgttggaaaat
aacctgtccaccatacgagctctggagacggtgcagaggaggctttctcgcatgtcagct
gaggagcagctgcgattcagactggacaacaccatggggggctcctctgaggttattcac
cgtaaagccattcagaggatatatggagaaaaggctcctgacatcattgatggcctcaag
agaaaccctgctgtgtcggtgcccatagttctgaaaaggttaaaaatgaaagaggaagag
tggaaagaagcccagagagggttcaacaaaatctggcgggaacagaatgagaagtattat
ctgaagtcacttgaccatcaaggcataaacttcaagcagaacgacaccaaagtactacgc
tccaagtctttacttaatgaaattgagatgttatatgaagatcgccaggagcgagcctca
gaggaaactgccacgccgccaccgagcggccctcacatcactctgacctacgatgacagc
cagatcttggaggacgctgccgccctcatcatccatcatgtcaaacgtcaagtgggcatt
cagaaagaagacaagttcaagatcaaacagataatccaccattttatccccgacctcctg
tttgcacgacgtggcgagctctccgacctggaggaggaggatgaagaggaggaggaggaa
gaaatggagacaaatcaagacactcccaagaagcacaacggtctccctggccgcagtcct
tccaagtccaagctcttgttcaccaacacggcagctcaaaaactgaaggccacagatgat
gcttataacctgttctttgtgaacaactactggtacgtcttcttccgccttcatcacatc
ctctgctctcggctgctgcgcatctatgggcaggctgagaagcagatcgaagaggacaac
aaagagagggagtgggaaagggaggtgctgggcctgaaaagagacaagaatgaaaatcca
gccgtccagctgaagatgaaggagccaatggatgttgatgttgaagactactattctgtg
tttctggaaatggtgcgaaatcttttggacgggaacatggagccggctcagtacgaggac
tccctgagggagatgtttaccatccacgcctacattgccttcaccatggacaaactgatc
cagaacattgtccggcagctccagcaccttgttactgatgacatctgtgtgcgtgtaact
gacatgtatctgagtgaaagtgccaaaaaagccacagggggaaccatttccacacagacg
tccagagccaccgcagagggggcctaccagcgaaaggcagagcagcttatgtctgatgag
aatagcttcaagttgatgttcatgaagaaccgagggactgtgagtctgggaatagagctg
ctggatacagaagaggagaactctgatgagccggcagatgcagaaaaatggtcagactac
gtgagcagatacctgaactcagactctgcgtccccggagctacgtgagcatttggcccag
aaaccagttttcctgcccaggaatttgaggcggatacggaaatgccagagaggatgggag
cagctgcagcaggaacggatcactaaaggcgcctcagataaatctcaggatggcagcagt
gagctgaagatgcagtgcatgttcaaactgaactcctacaagatggtttacgtctgcaag
tcagaggactacatgtacagacacaccgcactctctagagctcaccagtcccatcagcgg
gtgaacacacgtctgcacggacgctttcagacctggctggacacctgggcccagaaacac
gtgactagtgaaatggcagccagcactcacgagtggctgatgggtgatgcaaaagaggga
ctgttgtcctgcaccaccacctgcagccctgagatcctccactatctcaaaatcaacaag
tactgggtgcagtacaggacactatag
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