KEGG   Cyprinodon tularosa (White Sands pupfish): 119774726
Entry
119774726         CDS       T07496                                 
Symbol
smu1b
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ctul03041]
    119774726 (smu1b)
Spliceosome [BR:ctul03041]
 Complex B
  Other components
   Complex B specific factors
    119774726 (smu1b)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd NBCH_WD40 LisH_TPL WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_NWD2_C Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_Vps41 Ge1_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_WDR11_2nd TFIIIC_delta VPS8_N Mala_s_1-like WD40_like LisH
Other DBs
NCBI-GeneID: 119774726
NCBI-ProteinID: XP_038128323
LinkDB
Position
Unknown
AA seq 565 aa
MADSHQQTLYEKQDAARAVGGVRPADFTWPQREVLRAEPPQCQSGAAAAAGGNIPNMAVE
LEPTDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVQSIESFIEDVNRGHWDSVLLAIE
SLKLPDHTLINLYEQVVLELIEMREVGAARSLLRQTDPMIMLKQTQPERYAHLEKLLTFP
YFDPREAYPKGSSKEKRRRAIAEALAREVSVVPPSRLIGLLEQVSYIRRQINPDYLSPEM
TIDTSKEQRVQKESFPTQLYRHIKFGRRSHVECARFSSDGKYLITGSVDGFIEVWNFNTG
KICKDLKYQAQESFMMMDDAVLCMCFSQDADLLATGAQNGKIKVWKIQSGLYVRRFEHAH
NKGVTCLNFSKNNDHILSASSDQTIRIHELRSGKTLKELNGHLSIVNEACFTQDGFHIIS
ASSDGTIKIWNTKSCECLHTFKSQLVTPDVPVNNVIPLPQNPEEFVVCNRSSRLVIMNMR
GQTVKSFCSEQPLRACFICCTVSPHGEWIYCVGEDCVLYCFNYTSGRLEKTLTVHEKDVI
GIAHHPHENLIATYSEDGLLMLWKS
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggccgactctcaccagcaaacactatacgaaaagcaagatgcggcacgtgcggtgggt
ggcgtccgacccgcggatttcacgtggccccagcgagaggttctccgagccgagcctcca
cagtgtcagtccggtgcggcagctgcagcaggaggaaacatcccaaacatggctgtggag
ctggagcccactgatgttattcgtctaataatgcagtatctcaaggagaacaacctctac
cgcacactgaccaccttacaggaggaaaccacagtttctctcaacacagtgcaaagcatt
gagagctttattgaggatgtaaacaggggtcactgggactccgttctgttggctatcgag
tctctcaagttgcccgaccacacgctgattaacctctatgaacaggttgtactggagctc
attgaaatgagggaggtgggtgcagctcgttcgcttctcagacaaaccgacccgatgatc
atgttgaagcagacccagcctgagaggtacgcccacctggagaagctgctgacctttcct
tactttgaccctcgtgaggcatacccaaagggcagcagtaaagagaagcgacgcagagcc
atagctgaggcattagcaagggaggtcagtgttgtccctccatctcgtctcattggactc
ctggaacaagtcagctacattaggcgacagataaatccagattatctctcccctgaaatg
acaatcgacacaagcaaggagcagcgggtgcaaaaagaaagctttccaactcagctctac
cgccacataaagtttggacgacgatcacatgtggaatgtgcccggttctcttctgatggg
aagtatttgatcaccggatcagttgatgggtttattgaggtctggaactttaacactgga
aaaatttgcaaggatctcaaatatcaagcccaagaaagcttcatgatgatggatgatgct
gtgctgtgtatgtgcttcagtcaagatgcagatttattggccacaggagctcagaacggt
aaaataaaggtgtggaagatccaaagtggcttgtatgtgcgcaggttcgagcatgctcac
aacaaaggggtgacatgtttgaacttttcaaagaacaacgaccacatcctcagtgcttcg
tctgaccaaaccataaggatccatgaactgaggtcaggcaagacgttaaaggagttaaac
ggccatttatcaattgtaaacgaggcatgcttcactcaggatggttttcacatcatcagt
gcctcatctgatggcaccattaagatctggaacacaaaatcgtgtgaatgccttcacacc
tttaaatcccagttagttacaccagatgtcccagtcaacaacgtgattccccttccccaa
aaccctgaggagtttgtggtgtgtaaccgctccagcagattggtcatcatgaacatgcgc
ggccagacagtgaagagcttttgttctgagcagccactgagagcgtgcttcatttgttgc
actgtctcaccccacggagagtggatctactgtgtgggggaggactgtgtgctgtactgc
ttcaactacacatcagggaggctggagaaaacgctgactgtccatgagaaagatgtaatt
ggcatcgctcaccacccacatgagaacctgattgccacctacagcgaggatgggctgtta
atgctgtggaaatcctaa

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