Cyprinodon tularosa (White Sands pupfish): 119774773
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Entry
119774773 CDS
T07496
Symbol
si:dkey-22o22.2
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119774773 (si:dkey-22o22.2)
Cell adhesion molecules [BR:
ctul04515
]
Cadherins
Cadherin related
119774773 (si:dkey-22o22.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_CELSR2_9th
EGF
Fibulin_C
Cadherin_pro
Cadherin_2
hEGF
He_PIG
EGF_Teneurin
Laminin_G_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
119774773
NCBI-ProteinID:
XP_038128378
LinkDB
All DBs
Position
Unknown
AA seq
2932 aa
AA seq
DB search
MTKGARGPVLLNTLQLLLLLLHVPPACLSAQRRHPARYFGHIAENSPAGTPVDGVLIPLE
AGDCSGADLRSSLYGNYPSDFRIVFFAGHRDSAGHLTLMSAKPLDREFIAMYELTVELPS
RCQRRAAVVQVEVSDRNDNIPQFTSGNKTVEVDELAPLGTVLARFDAKDGDAERNGRATF
YASPESGLLYVVPQTGEVRLVGSLMGVRQLSLRLYVKDGGDVALVGQPVFLCVNVRGSGR
ARRRPRALSQDLTYTVTLPDHIRVGDLVFTVPDQRFEQRWFEVISEADSPVHIERDSGRI
YLARSLREPAEVTVKIQNLRGDEWYLCRLTLSLPSQTDLQWGMFPTPYLGAVGPDANPGS
VVYRLSMRQRDGTLGQPQFLLLDGGEDCFEVDRRSGLIRTTGRPLTPSKEYHLQVQAVNG
GDRKGPPATVSILAGYRPPQFTNSTYSLNVLENSPVGQPVAVVQAISFQKKSLSYMLLIN
PGNLFSINQESGALSLTRSVDYESGHNLHTLQVRASESDTGLSSAAEVVVHITDENDCTP
EFLHSIYTRDNIPESVAAGTSLLQVLARDCDSGVNSELSYFIPSADFDITSGGVVSPARR
LDYERPNHIYEFVVVAVDAGTPPRTGTASVRVRVANTNDEAPVFSQSVYKTFLSEDAGPD
TLVAIVHANDPDGDAVSYAITGGNEDSNFQLDNQKGIIKLRRSPPPRLRGPQYVLNITAT
DDNASGGPNPLSSAAQVIVGINDINNNKPVFDECQNYNAAVLENQPPGTFVLQVEAHDAD
MGVNGEVKYGIMHRDGVSSGFDIDPDTGVITTAVSFDRERQREFTLSVTATDQAEEPLIG
ICQITVLILDQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDDQGSNSAITYSLSEQ
KPAYLHINPNTGWIYVNHPISQTSRINQQILASDGGDRSSSVELTVIITNVHNQPPHWEQ
PEYWVTVPENTVRDAKIVTVKATSPLGDPRVTYNLEEGLVPETNMPVRFYIKPNRADGSA
SILVAENLDYEMTHFFTLRVRVQNVAAVPLASFTTVYVNVTDVNDNVPFFLSSTYEATVP
EGAHIGTSVAQVSATDLDSGLHGMIHYTILKDESGDSQYFSIDPVSGVLVTRASFDREQK
ASYLIEVQSQDGSESARPSQQGQPNTDTAYVRIFVTDVNDNAPAFALPVYEVSVEEDKEV
GFVLITVTANDEDEGANAKLRYQITSGNAMGTFDVEPEVGTIFVAQPLDYEMEQHYELRL
VASDGKWENETLVVVQVVNRNDEAPVFSQTEYHASVMEELTQFPVFILEVSATDPDQEAD
QTALRYTLHGQGAGGEFTIDEHTGRIYAQRRLDREERPAWRFLVLATDEGGMGLTGFADV
LLEVQDINDNPPFFPCPALVVDGCFVGQVPENSPADTSIMEMRAMDLDDPNEGRNALLTY
SIIKNIRNEINLDLFSINATTGTIYTVLRSPDRETEDKYLVVVEARDGGGLSGTGTATIM
ISDVNDHPPIFTQRSYSTQMNEDLEVNSEVLVVSATDRDEGENAVVTFSIVGGDDERKFF
VETDKVNRRGVIKLKKKVDFEKHHERTFNLTLKAEDADFYSLAYCVVQIEDSNDHAPVFF
PQFYESAAMSEDIPVGTIVTQVTASDLDSGQNGRFSYSISKESDPYNQFLVDQSGWVVVA
SSLDREKISQHRIMVLATDAGVPTLTGTAIVMVTVLDINDNGPEFEAPYKPIVWENTAAP
QAVQMNETSMLLHAIDRDTSTNGSPFSIRLLLLTSDATNFNLTDFRNGSAAITALRSFDR
ERQKEYRLPILMIDSGSPPVSSTSTLTVVIGDRNDHPHLPGHTHIVVYSYEGILPTTVIG
RIQSPDLDDWSEKVYRFHGKTTRLFGLNQSSGQLSIREGTPPGSYRLQVRVSDNTWPDVI
STAQVDVTELHQEALQQAGSIRLSNLTVEEFFRSSSGGQGSRFYRLGRMLAEFLQTSPEN
VQIFSLSKAGKETNTALDVWFAAHGSPYYKAEKLHGYVAANKAKLESMLGVSVSQVGVDD
CPSTDCSPYGGCSSEVSFSHVPVVLSSGNTSLVSLSASLTTRCGCRGREATHLSCSPYPI
NPCLNGGTCQDGPLGYRCMCPPMFDGPECQQTKHSFGGQGYAWFPAIKPCFQSRISLEFL
SESANGLLLYNGPLGLTQPGEQEDFIAVELRNGVPVLSINHGSGTLTLQLPPKAAINDRR
WHRLDIISDGKLVQMILDQCGGVPVNEMEGVGGEAQGIDESGCRAAGETPGNQRYLNVHQ
PLQLGGVKEMSPYRRYRSFTGCIRNLVVDSQVYDLANPGESVDSAPGCRPTDGVCVTAAG
PSCGIHASCLADWGSFSCECRPGYTGHKCERAVQEFSFDSDSVVRLQLRGGGSSRRTNIQ
MLLRTRATSGTLLSVASRDANEYIILEIIDGHVSVRANLGDGAHSLQLPAQRVDVGQWVL
VSLGRHDNTFTLRLEKGGGSREVQAQLGSRREIVVHPASLMIGNRPNAGEKADFQGCLRD
VRFNGHVLPLDGQSLDLVTVLERRGVTSGCSSDACRSQPCRSPLRCIDLWRKHQCKCPGP
QVTVTDESGLQRCVPSPCGPSSCRNGGVCHALSPDSYQCRCQEGFRGHRCELGQVKGQRM
ASLSPSSILAISMCLLVFIVVLVAVTVWNQKGSRNKFRKRGVYHIPAEHQSWEDIRENIL
NYNEEGGGEQDQNAYDITELKRPLCSSLSQSSSCTTAPLIKSSPGSQEEVHPSSSSCSSG
APYLSIPHHHHHHHHHQNAVSAGCSNDANYACQAGRDMEMNEAGRYADAPPVARSHVDFK
SYVERIVWEADNDGGAFPPDAYHVWCVEGSGSSAGSLSSLGSAVSCRRMFAGEKEREEEE
NEAGYVYDRLSRWGPKFQALSEMYDRPQLGLTYRDAIAYIQSHSHDPLPQHH
NT seq
8799 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggcgcaagaggaccggttctcctgaacaccctccagctgctcctgctgctg
cttcacgtcccgccggcgtgtctctccgcgcagcgcaggcacccagcgcgttattttggc
cacatcgctgagaactccccagctggaacccctgtggatggggtcctaattccgctggaa
gccggagactgctccggagcggacctccgaagcagcctgtacgggaactatccttctgat
ttcaggatcgttttcttcgctggacatcgggactcggctggacatttgactttgatgtcc
gcgaagcctttggacagagagtttatagcgatgtacgagctgacggtggagctgccctcc
aggtgtcagaggagagcagcggtggtccaggtcgaggtgtccgacaggaatgataatata
ccccagttcaccagcgggaataaaacggtggaggtggacgagctggcgcctcttggaacc
gtgttggctcgctttgacgcaaaggacggcgacgcggagagaaatggacgcgcaactttt
tacgcatcaccggagtccggtttgctgtacgtggttccacagacaggtgaggtgaggctg
gtcgggtccctgatgggggtccgccagctcagcctgcgcctctacgttaaggacggcggg
gatgtggcgctggtcggtcagccggtgttcctgtgcgtcaacgtccgtggatccggcagg
gcgcgccggagaccccgcgctctgtcccaggacctgacctacacggtgacccttccggat
cacatcagggtgggagatctggtgttcaccgtgccggaccagaggttcgagcagcgttgg
ttcgaggtgatatccgaggctgactcgcccgttcatatcgaaagggactcggggcgcatc
tacctggcgcgcagcctgcgggaacctgcggaggtgacggtgaagatccagaacctgcga
ggtgatgaatggtacctgtgcaggttaaccctgagcctgcccagtcagacggacctgcag
tgggggatgtttcctacaccttacctgggtgccgtgggtcctgatgccaaccctggatct
gtagtctaccggctgtcaatgagacaacgagatggcacgctgggacaacctcagttcctc
ctactagatggtggggaggactgcttcgaggtggaccgtcgctctgggttgattagaaca
acaggacggcctctgaccccgagcaaggagtaccatctgcaggtccaggcagtgaatgga
ggagaccgtaaaggcccaccggccacagtttccatcctcgctggataccgaccaccacag
ttcaccaactccacctacagcctgaatgtgttggaaaacagccctgttggccaacctgtt
gctgtggttcaggccatctccttccaaaagaagagtctgtcctacatgctactgatcaac
cctggaaacctgttcagcatcaaccaggaaagcggcgctctgagcctcaccaggtctgtc
gactacgagagcggtcacaacctgcacaccctgcaggtccgagcctccgaatccgacacc
ggcctcagcagcgccgcagaggttgttgtccacatcacggatgaaaacgattgcacccca
gagtttcttcactccatctacaccagagataacatccctgagagcgtcgcagctggaacc
tcactgctgcaagttctcgctcgtgactgtgattccggcgtgaactcggagctctcctac
ttcattccgagtgccgattttgacatcacttccgggggcgtggtcagccccgcccgtcgc
ctggactacgagcggcccaatcacatctatgagtttgtagtggtggcggtggatgcgggg
acgcctcctagaactgggacggcctctgtccgcgtccgtgtggccaacaccaacgatgag
gcgccggtgttctcccagagcgtctataagacgttcctcagcgaggacgccggtcctgac
acgctggtcgccatcgttcacgccaacgacccagatggggacgccgtctcctacgccatt
acaggtggcaatgaggacagcaacttccagcttgataaccaaaaaggcatcatcaagctt
cggcggagtccaccgccacggctcagaggcccgcagtacgtcctcaacatcaccgctaca
gatgacaatgcttcgggtggtcccaatccactcagcagcgccgctcaggtcatcgtaggg
atcaatgacatcaacaacaacaagcccgtgtttgatgagtgtcagaactacaatgcagca
gttcttgagaaccagccgccggggacgttcgtgctgcaagtggaggcccacgacgccgac
atgggggttaatggagaggtcaaatacggcatcatgcacagagacggtgtatcgtctggg
tttgatatcgaccctgacaccggcgtgataaccacggctgtgagtttcgacagggagcgt
cagagagaattcacgctttctgtgacggccaccgatcaggccgaggagccactgatcggg
atctgtcagatcacggtgctgatcttagatcagaacgacaacgaccccaaatttgaaaac
agccgttaccaatacttcctcagagaggatactccagtgggaactagctttttacgggcg
gcagcacacgacgatgaccaggggagcaactcggctattacttactcgctgtccgagcag
aaaccagcctaccttcacatcaaccccaacactggctggatttatgtcaaccaccccatc
tcacagacgtccaggatcaaccagcagatcttggcgtcagacggaggagaccgcagcagc
tctgtggagctgacagtcatcatcaccaacgttcacaaccagccgccccactgggagcag
cctgaatactgggtcactgtgccggaaaacaccgtccgagatgccaagatagtgactgtg
aaggcaacgtctccgctcggcgatccgagggtgacctacaatctggaggaaggcctggtg
ccagagaccaacatgccggtacggttctacatcaaaccgaacagggcggacggttcggca
tcgatcctggtcgccgagaacctggattacgagatgacgcacttcttcacgctgagagtg
cgtgtgcaaaacgttgccgccgtgcctctggcttccttcaccaccgtatacgtcaatgta
acagacgtcaacgacaatgttcctttcttcctttcatccacgtacgaggccacggttcct
gaaggagcacatattggcacgtcggtcgctcaggtgtcggccactgacctcgattcgggt
ctgcatggcatgatccactacaccatcttgaaggatgagagcggagactctcagtacttt
agcatcgaccccgtcagcggcgtcctagtaactcgtgcttcttttgatcgcgaacaaaaa
gcgtcctacctgatcgaggtgcagtcacaggatggctcagagtccgcccgaccgagccag
caaggccagccgaacacagacaccgcctatgtcaggatctttgtcaccgatgtcaacgac
aacgcgccggctttcgccctgccggtgtacgaagtcagtgtggaggaagacaaagaggtg
ggcttcgtcctcatcaccgtcaccgccaacgatgaggatgaaggcgccaatgctaagcta
cgctaccagataacctcaggaaacgccatggggaccttcgacgtggagccagaggtgggc
accatcttcgtggctcagcctctggattatgagatggagcagcactacgagctgcggctg
gtggcttctgacgggaagtgggagaatgagacgctggtggtggttcaggtggtcaaccgc
aacgacgaagcgccggtgttcagtcagacagagtatcacgcctctgtgatggaggagctc
actcagtttcctgttttcattctggaggtgtcagcaacagatcctgatcaggaagccgac
cagaccgccctccgttacaccctccatggccagggtgccggtggggagttcactatagat
gaacataccggaagaatctatgctcagcgtcgcttggacagggaggagcgccctgcctgg
agattccttgttctggccacagacgaggggggaatgggccttacaggattcgccgatgtg
ctcttagaggtccaagacattaacgataacccccccttctttccctgcccagctctagtg
gtagacgggtgttttgttggtcaagtgcctgaaaactcaccagcagacacctccatcatg
gagatgcgtgccatggaccttgatgacccaaatgaaggccggaatgccttgcttacctac
agcatcatcaagaacattcgcaatgagatcaacctcgacctgttctcaataaacgccact
acagggactatctatacagttctgcgttcaccggaccgggagaccgaggacaagtatctg
gtggtggtggaggcccgggatggaggtggtttgtctgggacgggaacagccaccattatg
atttcagacgtaaatgaccacccacctatttttactcagaggtcctactccacccagatg
aatgaggacctggaggtaaatagtgaggttctcgttgtttctgccactgatagagacgag
ggtgagaacgctgttgttacgttcagcattgtcggcggagatgatgaaaggaagttcttt
gttgaaacagacaaagtaaaccgacgaggcgtgataaaacttaaaaagaaggttgacttt
gagaaacaccatgagaggacttttaatctgaccctgaaggcagaagatgctgatttttac
agcctggcctactgtgttgtccaaattgaagactccaatgatcatgctcccgtcttcttt
ccgcaattctatgagtccgctgccatgtctgaagacattcccgtgggaacgattgttact
caggttactgcatctgatctggactctggccaaaatggccgtttctcttacagcatttca
aaagagtctgacccttataatcagttcctggtggaccagtctggttgggtagtagttgct
agttctctggacagagagaaaatctcccagcacaggataatggttcttgctacagatgct
ggtgtaccaaccctaactggcaccgccatcgttatggtgactgtacttgatataaacgac
aatgggcctgagttcgaggctccctataaacctattgtttgggagaacacagcagcgcca
caggctgttcagatgaatgaaacctccatgcttcttcatgccatcgaccgtgacacctca
actaacggcagcccattctccatccggctcctcctgctcacctccgacgccaccaacttt
aatttgacagactttcgaaatggcagtgcggctatcacagctcttcgcagctttgatcgt
gagcgtcaaaaggagtaccgccttcctattctcatgattgacagcggatctcctccagtg
agctcaaccagcacgttgacagttgtcattggtgacagaaatgatcatccacacttacct
ggacacacccacattgtggtctacagctatgaaggtatcctcccgacaacagttattggg
cgtattcagtcccctgaccttgatgactggagtgagaaggtgtaccgtttccatggcaaa
acaaccaggttgtttggtctaaaccagagctcaggtcagctcagcatcagagagggaacc
cctcccggctcataccgcctgcaggtccgcgtgtcagacaacacatggcctgacgtcatc
tcgaccgcccaggtggatgtcacagagctgcaccaggaggccctgcagcaagccggctcc
atccgtctgagcaatcttacagtggaggagtttttccggagtagcagcggaggtcaggga
agtcgtttctatcgtctgggtcggatgttggctgaattcctgcagacctcgccagagaac
gtccaaatcttctctttaagcaaagccggcaaggagacgaatacagcgcttgatgtatgg
tttgctgcacacggatctccgtactacaaggccgagaagctgcacggctatgtggcagca
aacaaggccaagttggagtccatgttgggtgtatccgtctcccaggtgggtgtggacgac
tgtccgtccacagactgcagtccgtacggcggctgcagcagtgaggtgtcgttcagccat
gtccccgtggttctgagctccgggaacacctctctggtttctctgtcggcctctttgacg
acacgctgcggctgcagagggcgagaggcgacccacctgtcctgctccccgtatcccatc
aacccctgcctcaacggaggcacctgccaggatggaccactgggataccgatgcatgtgt
ccccccatgtttgacgggccggaatgccagcagaccaagcacagctttggaggtcagggt
tacgcctggtttcctgccatcaagccgtgcttccagagtcgcatatccctggagttcctg
tcggagtcggccaacgggctgctgctctacaacgggccgctcggcctcacccaacccggg
gagcaggaggacttcatcgccgtcgaattaagaaacggcgttccagttctgagtataaac
cacggatcaggaactctgacccttcagcttccacctaaagcagcgatcaacgatcgacgc
tggcatcgcctggacataatcagtgatggaaagctggtgcagatgattctggaccagtgt
ggtggggttccagtgaatgagatggaaggtgttggaggtgaggcccaaggcatcgatgag
tccggctgcagagctgcaggagaaacgccggggaatcagcggtatttaaatgttcaccag
cctctccagctgggaggggtgaaggaaatgtctccctaccgccgttaccggagctttact
ggatgcatccgaaacctcgtagtcgacagtcaggtgtatgatctggcaaatccaggtgag
agtgtggacagtgcgccgggttgcaggcccacagacggagtatgtgtgacggcagccggt
ccttcgtgcggcattcacgcctcctgcctcgctgactggggctccttcagctgcgagtgt
cgacccggatacaccgggcacaagtgtgagagagctgtccaggagttttccttcgactcg
gacagcgtggtgcgtttacagctcagaggaggcggaagctcccggcgcaccaacatccag
atgctcctccgaaccagagccacgtcagggaccctgctctctgttgcctcccgggacgcc
aacgagtacatcattctggagattattgacggtcacgtctccgttcgcgccaacctggga
gacggtgcccattcactccaactcccggctcaaagagtggacgtcggacagtgggtcttg
gtcagccttggtcgccacgacaacacgttcaccctgcggttggaaaagggaggggggtca
cgggaggttcaggctcagctggggagccgcagggagattgtggttcatccggccagcctg
atgatcggcaacagaccgaacgccggagagaaggccgactttcagggatgtctgcgggac
gtccgcttcaacggccacgtcctccctctggacgggcagagtctggacctggtgacggtg
ctggagaggcgaggggtcacctcaggctgctccagcgacgcctgcagaagccaaccgtgc
cgcagcccactgcgctgcatcgacctgtggagaaaacatcagtgcaagtgtccgggtccg
caggtgacagtaacagatgagtcgggtctccagcgttgtgttccgtcaccctgcggtccg
tcttcctgtcgtaatggcggcgtatgccatgcactctcccccgacagttaccaatgccgc
tgtcaggagggcttcaggggtcaccgctgtgagctggggcaggtcaaaggtcagaggatg
gcctctctcagtcccagctccatcctggccatcagcatgtgcctgcttgtctttatcgtc
gtgttggtagcggtgacggtttggaaccagaaaggaagcagaaacaagttcaggaagcga
ggagtttatcacattcctgctgaacaccagagctgggaagacatccgggaaaacatcctc
aactataacgaggaaggaggaggagaacaggaccagaatgcatacgacatcacggagctg
aagcgtcctctgtgctccagtctatcccagtcgtcctcctgcaccaccgccccgctcatc
aagtcctccccaggctcccaggaggaggtccatccgtccagctcctcctgcagctcaggt
gctccctacctcagcatccctcatcaccaccatcaccaccaccaccatcagaacgcagtc
agcgccggctgcagcaacgacgccaactacgcctgtcaggcaggcagggacatggagatg
aatgaggcgggcaggtatgctgatgctccgcctgtggcgcgctcccatgtggactttaaa
agctacgtggagcgaatcgtttgggaggcggacaacgacggcggcgctttccctccagat
gcctaccatgtgtggtgcgtggaggggtctgggtcctcggcaggaagcctgagctctttg
gggtcggctgtgtcctgcaggagaatgtttgctggggagaaggagagggaggaggaggag
aatgaagcaggctatgtttatgacaggctgtcccggtggggccccaagtttcaggctctg
agtgagatgtacgaccggccgcagctgggcctcacatacagggacgcaatagcctacata
cagagccacagccatgaccccctgcctcagcaccactag
DBGET
integrated database retrieval system
