Cyprinodon tularosa (White Sands pupfish): 119774917
Help
Entry
119774917 CDS
T07496
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119774917
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119774917
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
119774917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
119774917
NCBI-ProteinID:
XP_038128583
LinkDB
All DBs
Position
Unknown
AA seq
1381 aa
AA seq
DB search
MMAKKGDQSFRSLVIPFSPDVPCDSSGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWT
VCCHCNAKKKEVHRITTGDGIKRTDKEDAAASEVGWMTSVKDWAGVMISAQTLTGRVLVV
LVFALSIGALVIYFIDSADPIEDCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAASDKLWF
WLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVN
LCSIFISTWLTAAGFIHLVENSGDPWENFSNSQTLSYWECVYLLMVTMSTVGYGDVYAKT
TLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVNGRKHIVVCGHITLESVS
NFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIE
SADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNW
KEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMY
TEYLSSAFVGLSFPVICELCYVKLKLLLIAIEYKSDQRESSTLINPGNHVKMEEGTLGFF
IASDAKEVKRALFYCKACHDDITDPKRIKKCGCKKLIYSKTPAYKRMRLACCFDRGRSKW
QRSCMPVNVRSNLDYPHQDIPLSALSVNDCSATLRASKNSYNGYIKSTVKSSPVIRPPPY
QYKSVKLNHVSASMVCRAPHRDAAGPIPLVNNRKGSLLALSKPSALKLSLVGSRDLAQVG
QLPGVAEETRRLQRARSLPVKYRYHHGHPSITTHSQMKLEEDQQTALSPKKKQRNGGMRN
SPNSSPKITRHDPLLIPGNEQGETMDENIKKYDSTGMFHWCPSKDIEKVILTRSEAAMTV
LSGHVVVCIFGDVKSALIGLRNFVMPLRASNFHYHELKHIVFVGSLEYLKREWETLHNFP
KVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIKSMLFDD
SIGVLQANSQGFTPPGMDRSSPENSPVHGLVRQTSVTTGGNIPIITELAPLAKQGKKVPV
ISFSQDKSSGTSIQMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSL
MSATYFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALY
DGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLNTQNQCTKRYVITNPPYAFEL
VPSDLIFCLMQFDHNAGQSRTSLSHSSHSSHSSSKKSSSVHSIQTTNRANRVKSRDSRDK
QNATRINRAGQEKTRFTDEPQNTHLRTIQINLLNTHTVNPVGLNKSTSSLIPPIREAGDE
C
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaagaaaggagaccaatcgttccgcagtctggtgatcccgttctcgcccgac
gtgccctgtgacagcagcgggcagcgcatgtggtgggctttcctcgcgtcctccatggtc
actttctttggggggctcttcattatcctcctgtggaggaccctaaagtatctgtggaca
gtctgctgccactgtaacgctaagaagaaggaagtgcaccggatcaccactggcgatggc
attaagcgtacagacaaagaggatgctgcggcgagcgaggtgggctggatgacgtcagtg
aaagattgggctggagtcatgatatccgctcagacgctgacaggaagagtcctggtagtg
ctcgtcttcgctctcagcattggagcccttgtaatatacttcatagattctgctgatcct
attgaggactgtcagaacttctacaaagacttcaccttgcagatcgacatggcgttcaac
gtgttcttcttgctttatttcggcctccgttttatcgctgccagtgacaagctgtggttc
tggctggaagttaactcggtggtggacttcttcacagttcctcccgtctttgtctcggtg
tacctcaacaggagctggctgggtttgaggtttttaagagccttaagattgatacagttc
tcagaaattttacagtttttgaatattctgaagacaagcaactccattaagttggtgaac
ttgtgttcaatcttcataagcacatggctaactgcagcaggcttcatccatttggtggaa
aactcaggggatccttgggaaaacttctcaaattctcaaacactttcctattgggaatgt
gtctacctactaatggttacgatgtcgactgttggctatggagacgtttatgcaaaaacc
actcttggccgcttgtttatggtcttctttatccttggtggtttggccatgtttgcaagc
tacgtccctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagt
gctgttaatgggagaaagcacatcgtggtctgtggtcacataacgctcgagagtgtgtcc
aactttctaaaagacttcctacacaaggacagggatgatgtcaatgtagaaattgttttt
ctccataatatttcccctaatcttgagctggaagccttgtttaaacgtcactttacccaa
gtagagttttaccagggctcagtcctgaatccccatgacctggccagagtcaagattgaa
tcagctgatgcctgcctgattttagcgaacaaatactgtgcggacccagatgctgaagat
gcatccaacatcatgagggtaatatcgatcaagaactatcatcccaaaatccgaataata
acacagatgttgcagtaccacaataaggcgcaccttttgaacatcccgagctggaactgg
aaggagggggacgacgctatttgccttgcggagctgaaactgggtttcattgcccagagc
tgcctggctcaaggcctctccaccatgctggccaaccttttctccatgaggtccttcatc
aagatcgaggaagacacatggcagaagtattacctggagggagtagccaatgagatgtac
actgagtacctgtccagtgcctttgttgggttatccttcccagtcatatgcgaactctgc
tacgtgaagctgaagctactgttgatagcgattgagtacaagtctgatcaaagggaaagc
agcaccttgatcaaccctggaaaccatgtgaaaatggaggaggggaccctgggctttttc
attgcaagtgatgccaaagaagtaaagagggcactgttttattgcaaggcctgtcatgat
gatataacagatcccaaaaggataaaaaaatgtggatgcaagaaattgatatattccaag
acgcctgcctacaagagaatgagactggcatgttgctttgatcgcggccgctccaagtgg
cagcgctcttgcatgccggttaatgttcgtagtaacttggactaccctcatcaggacata
ccactctctgctctctctgttaatgattgctcagccactttacgtgcctctaaaaatagc
tataatggatatatcaaatcaacagtaaaaagcagccctgtaatccggccaccaccttat
caatacaaatcagttaaactgaaccatgtttcagccagcatggtctgtagggccccccac
agagatgctgctggtcccatcccgttggtaaacaaccgcaagggaagcctgctggccctc
agcaagccttctgccctgaaactgagccttgtgggctctagagacctggcccaggtcggc
cagctgccaggggtggcagaggagacacgtcgacttcagcgggcgcgaagcctgcccgtg
aagtacagataccaccacggtcaccccagtatcaccactcacagtcagatgaagctcgag
gaggaccaacagacagctttatcacccaaaaagaagcagcgtaatggaggaatgagaaat
tctccaaactcctcacctaagattacgagacacgacccgctccttatcccaggcaatgag
cagggcgagaccatggatgagaacataaaaaaatacgactccacggggatgtttcactgg
tgcccatctaaagacattgagaaggttatcctgactcgcagcgaagcagctatgactgtt
ctgagcggacatgtggttgtgtgcatctttggggatgtaaaatcggcactgattggtctc
cgaaactttgtgatgcccctgagagcaagcaacttccactaccacgagttgaagcacatc
gtgtttgtgggatcccttgaatatctgaaacgggagtgggaaacactacacaacttccca
aaagtgtccatcctgccgggcacaccattgagcagggctgatctgagggctgtcaacatc
aacctctgcgacatgtgtgtcatcctgtcagccaatcagaacaatattgacgatgcatca
ctgcaggacaaagagtgcatcctggcgtcacttaacatcaaatccatgctgtttgatgac
agcatcggggtcctgcaggccaattctcaaggcttcacgcctcctgggatggaccgatcc
tctcctgagaacagcccggtccacggattagtgcggcagacctccgttacaactggagga
aatattcctatcataacagagcttgcaccattagcaaagcaaggcaaaaaagtgcctgtg
atttcattcagtcaggataaaagcagtgggaccagcatacaaatgataactgagctggtt
aatgactcaaacgttcagtttctggaccaagacgatgacgacgatccagacacagagtta
tacctcactcagccttttgcatgtgggacagcatttgcagtcagtgtgcttgactcctta
atgagtgcgacatacttcaatgataatatcctcaccttgatccggacgttggtaacaggt
ggtgccactccagagcttgagggtttgctggctgaggagaatgcattacgtggtggctac
agcactccacagaccctggcaaacagggacaggtgtcgtgtggcacagctggccctatat
gatgggccctttgctgacctcggggatggcggctgttatggggacctgttctgtaaagcc
ttgaaaacgtacaatatgttatgctttgggatctatcgcttacgagatgcacatctaaac
acacaaaatcagtgtaccaaacggtacgtcatcaccaatcctccgtacgcatttgagctt
gtgccctcggacctcatattctgcctgatgcagtttgaccataatgccggccaatcacgg
accagtctctcccactcttcccactcctcgcactcttcgagcaaaaagagctcctccgtc
cactcgattcaaaccaccaaccgcgccaacagagtcaaaagcagggactcacgagacaaa
caaaatgcaacaaggatcaatagagctggccaagaaaagacacggtttacagatgagcca
cagaatacccacctgagaaccatacagatcaatcttctgaatactcacacagtcaaccct
gttggtctcaataaatccaccagtagcttgatcccacccatcagagaagctggggatgaa
tgctga
DBGET
integrated database retrieval system
