Cyprinodon tularosa (White Sands pupfish): 119774955
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Entry
119774955 CDS
T07496
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119774955 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119774955 (aqr)
Spliceosome [BR:
ctul03041
]
Complex B
Other components
Prp19-related factors
119774955 (aqr)
Complex C
119774955 (aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
DEAD
UvrD_C_2
AAA_16
SLFN-g3_helicase
UvrD-helicase
AAA
Parvo_NS1
AAA_22
PhoH
DnaB_C
nSTAND3
ATPase
Motif
Other DBs
NCBI-GeneID:
119774955
NCBI-ProteinID:
XP_038128698
LinkDB
All DBs
Position
Unknown
AA seq
1469 aa
AA seq
DB search
MATKEKETPAKKVAAPSVSQINAEYVTQLANKYWAPHVKEKLPFEPQVMEDVYEKEIVMS
KFAIRKIMLLEFSQYLENYLWVNYTPEVSSKAFIMSICCIVNEKFRENVPAWEVFKKEPT
HFPFFFKCVREAVLADEESDLTLKEQTVLLVFLDHCFNSLEVDLIREQVQQLISLPMWMC
LLPSRLQHELKKVPKLQKFWNLIKKKLDKMDAEAAEQATKERTFLSSLIKKFRAVLMSVP
AEGTVSMDKVHYCERFIELLIDLEALLPTRRWFNTVLDDSHLMVSCQLSGLTKREKEGHL
FCQLLDMLKFYTGFEINDQTGNALTQKEMTTLHYDRITSLQRAAFAHFPELHDFALSNVA
AVDTRESLTKLFGHLSPNMLHRVASYLCLLPELPEGQETTIEKEFLLEMLVSRHERRISQ
IEQLNQMPLYPTEKIIWDQNIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLES
TYEIRQDIEDVVWRMKPWQSEYGGVVFGGWARMAQTITSFSIVEVAKPNIGESWPARVRA
DVTINLNVQDHIKQEWEGLRKHDVCFLITVRPVLLYGTRFDRRQPFLDQTGLVYVRGCEV
QGMLDDKGRVIEEGPEPKPKLRGDSRTFRVWLDPNQYQQDMTSSIQNGTEDPYETFNIIM
RRKPKENNFKAVLETIRHLMNTECVVPDWLHDIILGYGDPGSAHYSKMPNQISTLDFNDT
FLSLDHLRSCFPGHTIKVAEEKPELQVPPFRITFPISNKQDKGKKRKADEEEKDVEEDKT
LIVEPYVAPNRGPYPYNQPKRNTIQFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQI
ISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYG
RVNYVLARRLELLREVGRLQESLDVPGDVSYTCETAGHFYLYQVISRWEQYMSKVKPKQG
KKVEVEDVAAHFPFHKYFSNAPQPVFKGRSYEEDMDIAEGCYRHIKKILTQLEEFRAFEL
LRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPL
LLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVDLDAQ
GRARASLCNLYNWRYKHLGNLPHVQELPEFQVPNPGLTFDFQLVNVEDFNGVGESEPNPY
FYQNLAEAEYSVALFMYMRLLGYPSERISILTTYNGQKHLIRDVINQRCAGNPYFGQPHK
VTTVDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFENCFEL
TPAFKQLTARPLQLHIRPHEYYSQEQPRDERPDQIIKDMPEMTNFVYNMYMHMIQTSQKY
RQQQQQKLALPPQQTKEDAAGKTEQGSTEETQPETPMEQETPGETSSEPKAENAKEEEGN
QDTVGPAKMPEHPGRDSDSDDEEEEEQEQ
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaggagaaagagactccagctaaaaaggttgcagcgccttcagtgtcccag
ataaatgctgaatatgtcacacagctcgctaacaaatattgggctcctcatgtaaaggaa
aagctcccttttgaacctcaggtgatggaagatgtctatgaaaaagagattgtcatgtct
aaatttgccatcagaaaaattatgctactcgaattcagtcagtaccttgagaattatctt
tgggtgaactacacacctgaggtgtccagcaaagcatttatcatgtccatttgttgcatc
gtcaatgagaagttcagagaaaatgttccagcctgggaggtgttcaagaaggagcccaca
cacttcccttttttctttaaatgtgttagggaagctgtgctggcagacgaggagtctgac
ctcaccttaaaggaacaaaccgtgcttctggttttcctggatcactgtttcaacagtctg
gaggtagatttgatcagagaacaggtgcagcagctcatctctctgcctatgtggatgtgt
ctcttaccatccagactccagcatgagctgaagaaggttcccaagctgcagaagttttgg
aatctaatcaagaaaaaattggataagatggatgctgaagcagccgagcaagcaactaaa
gaaaggaccttcctttcatctcttattaaaaagtttcgagcagtcctgatgtcggttcca
gcagaggggaccgtgtccatggacaaagtgcattactgtgagaggttcattgagctgttg
attgatttggaggcgctgcttccaacacgccgttggttcaacacggtgctggatgactcc
cacctgatggtcagctgccagctctctggtctcaccaaaagagagaaggagggtcacctt
ttctgtcagcttcttgacatgctgaaattctacactggcttcgagatcaatgaccagaca
ggaaatgctttaactcagaaggagatgaccactttgcactacgacaggatcacctcactc
cagagagctgcctttgctcattttccagagttgcacgactttgcgttgtccaatgttgca
gctgtggacaccagagagtcgttaaccaagctctttggacatctcagtcccaacatgctc
caccgggtggcctcatacttgtgtctgctgccagagctgcctgaaggccaggaaacaaca
attgagaaagagtttctccttgagatgttggtttcccgtcatgagcgcagaatctctcag
attgaacaactgaaccagatgcccctttatcccacagagaagatcatctgggatcaaaat
attgtcccaacagagtattactcaggcgaaggctgcttggctctgccaaagctgaatctc
caattcctgacgcttcatgactaccttttgaggaactttaacctctttcgcctggagtca
acttacgagatcagacaggacattgaggatgtggtgtggagaatgaaaccatggcagtca
gagtacggtggggtggtgtttggaggctgggctcggatggctcagacaatcacctctttt
tccatcgttgaagttgccaagcccaacattggagagagctggcctgctcgtgtgcgggct
gacgtcacgattaacctcaacgtacaggatcacatcaaacaagaatgggaaggtctacga
aagcatgacgtctgctttctgatcacagtgcggcccgtgttgctctacggcacacgcttc
gaccggcgccagccctttctggaccagactgggctggtgtacgtgagaggctgcgaggtg
cagggtatgctggatgataagggacgtgtcatcgaagaaggacctgaacccaaacctaag
ttacgaggagacagcagaaccttccgtgtttggctggatcccaaccagtatcagcaggac
atgaccagcagcattcagaatggcaccgaagacccgtatgagaccttcaacatcatcatg
agacgcaaacctaaggagaataatttcaaggctgtgctggagaccatcagacacctgatg
aacacagaatgcgtcgtccccgactggcttcacgacattattcttggctacggggaccca
ggcagcgcccactactccaagatgcccaatcagatctccacattggacttcaacgacacc
tttctctccctggatcacttgcgatcgtgttttcctggtcataccataaaggttgctgag
gagaagccagagcttcaagtccctcctttcagaatcacgtttcccatctccaataaacaa
gacaaagggaagaaaagaaaggctgatgaagaagagaaagatgtggaagaagataaaacg
ctgatcgtggaaccatatgtggcccccaaccgtgggccgtatccctacaaccagcccaaa
aggaacacgattcagttcacacctacgcagatcgaagccatccgagccgggatgcagcca
ggactaactatggttgtaggaccaccaggcactggaaagacagacgtggctgttcagatc
atctccaacctctatcacaactttcctgagcaaaggactctcatagtcactcattctaat
caggctttgaaccagctctttgaaaagattatggctttagacatcgacgagcgccacctt
ctgcgtctgggtcacggagaggaggagctggagactgagaaagacttcagtaggtatggt
agagtgaactatgtccttgctagaagactggagctcctcagagaggtgggaagattacag
gagagcttggatgtccctggggatgtgtcttacacatgtgagactgcaggacacttctac
ctttatcaggtgatatcccgctgggagcagtacatgagcaaagtcaaacctaaacagggc
aagaaggtggaggtggaggatgttgctgcacacttcccgttccacaaatacttttccaat
gccccccagcccgtattcaagggtcggtcgtatgaggaggacatggacatcgcggagggc
tgctatcgccacatcaagaaaatacttacccagctggaggagtttagggcctttgagctg
ctgaggagcggactggaccgctccaagtatcttctcgtaaaggaagctaaaatcatcgcc
atgacctgcacacacgctgcgcttaaacgccatgacctagtcgagctaggattcaagtat
gataacatcttgatggaggaggctgcacagattcttgagattgagaccttcatccctcta
ctgctacagaacccagaagacggctacagcaggctgaagcgctggatcatgatcggagac
caccaccagctgcccccagtcatcaagaacatggccttccagaagtattccaacatggag
caatctctgttcaccagatttgtgcgtttgggtgttcctactgtagatttggatgcgcag
ggccgtgcacgtgcaagcctttgtaacctttacaactggcgctacaaacatctcgggaac
ctgcctcacgtccaggaacttcctgagttccaggtccccaaccccgggctgaccttcgac
tttcagcttgttaatgtggaggacttcaacggggtgggagaatctgaacccaacccttat
ttctaccagaacctggcagaggctgagtactctgtagccctcttcatgtacatgcgcctt
ttgggctacccatcggagcgaatcagcatcctgaccacctacaatggacaaaaacacctg
atcagagatgtcattaaccaacgatgtgctgggaacccctactttggacagccgcataag
gttacaacagtggacaggttccagggtcagcagaatgactacatcatcctatcgctggtc
cgcaccaaagctgtgggacacctcagggacgtgaggcgtcttgtggtagccatgtcgaga
gccagattgggtctgtacatctttgcccgggtgtcactgttcgaaaactgctttgagttg
actcccgccttcaagcagctcactgccagaccgctgcagctgcacatcagaccacatgag
tactacagccaggaacagcctcgagacgagcggccggaccaaatcatcaaggacatgcca
gagatgacaaactttgtgtacaacatgtacatgcacatgatccagacctcccagaagtac
agacagcagcaacagcagaaactggctctgcctccacagcaaaccaaggaagatgctgca
ggcaagacggagcagggaagcacagaggaaacacagccagaaactcccatggagcaggaa
accccaggagagacaagctccgagccaaaggcagagaacgccaaggaggaagagggcaac
caggatacagttggcccggcgaagatgccagagcatccaggcagagacagcgacagtgat
gatgaggaggaggaggagcaagagcagtaa
DBGET
integrated database retrieval system
