Cyprinodon tularosa (White Sands pupfish): 119775294
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Entry
119775294 CDS
T07496
Symbol
itga11a
Name
(RefSeq) integrin alpha-11a
KO
K06587
integrin alpha 11
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04510
Focal adhesion
ctul04512
ECM-receptor interaction
ctul04810
Regulation of actin cytoskeleton
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119775294 (itga11a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119775294 (itga11a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119775294 (itga11a)
04810 Regulation of actin cytoskeleton
119775294 (itga11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctul04515
]
119775294 (itga11a)
Cell adhesion molecules [BR:
ctul04515
]
Integrins
Integrin alpha subunits
119775294 (itga11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
LYRIC
Motif
Other DBs
NCBI-GeneID:
119775294
NCBI-ProteinID:
XP_038129156
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MEYYCFLLLWICSQHLGFHDCFNIDIKTPRIIKGPKQAQFGYTVQQHVAAGADKWLLVGA
PYENTGNFQTGDVYKCAVNKRTNGNSCSKLNLGKISLTNVSERKNKMRLGMTLVSNPKDS
SFVACGPLWSYECGSSYYSTGICSKVNASFKFSRTIIPAFQRCETFMDIVIVLDGSNSIY
PWSEVQNFLINILQKFHVGPGQIQVGVVQYGEKVVHEFKLSDYKSVEEVVKRARSIDQRG
GEETNTALGISTARSQAFKQGGRRGAKKVMIVITDGESHDNADLQQAIEDSEKDGITRYA
IAVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFNVTDESALNDIVDALGERIFSLEGTS
KNGTAFGLQMSQAGFSAHNVEDGILVGAVGAYDWNGAVLKETRQGKVIPPKSSYMQEFPE
ELKNHGAYLGYTVTSVVSSRNGRLLVAGAPRFNHTGKVIIFTLKNTGNLTILHSLKGHQI
GSYYGSEIAPLDIDGDGITDNLLVAAPMFFSAGLEKGKVYIYRVTELNRFIPEGALEIHN
GGQNARFGSSLAPVPDLNGDGFNDLVVGAPLEDDHKGAIYVFFSQHNRILRKYKQRIAAV
DLAAGLQYFGRSIHGTMDMNDDGLVDLAVGSLGAAVLLWSKSVVRIYTNVRFEPSKVNIF
MKDCQRGGKDVTCMSAIVCFNITARTAVPPTQEIGIRYNVSILERRFNPRAILDQPNKMQ
PQNLTLSPGEEACEYIYFHVMETTDYARPIVFAVQVGLQDLDQGPVLDDRWPVVVKTELP
FWNGCDEDDRCMPDLSLQSKNDLMTRKQFCARPMQSRGLFCRHQGGAEAEGLLRVIEGNK
KRMVLDVKLENRGENAYNAVINITYSPNLRFSSLIVKDTSEIKIECNAVDRKRNEKICNV
SAPFMRAKSQVLFRLEFEFSRTIFLEYLRVLLEASSDGEEVTISDNFDDIYYSLKYEGDL
LFTRDSDPTRYEIKSELSLEEPGVIGPPFNFTFQLQNLGYFPVRDLQLNIEIPEMTKNGN
QLLQIFNLHVDQRDGTRCLPPQHIAESRASPEDLSRFSRLNRSNTLTLPIQCTVNVPSHR
DVWVRITGALRIDTLHALKFKVLELITSASVELPSASPMFLHEEKPVRHIILEIRKEGDY
RIPTWIIVGSTLGGLLLLALLSLALWKLGFFHRQKRKDKEEQEANGKVAEER
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggagtactactgcttcctcctgctctggatttgcagccagcatttagggttccacgac
tgcttcaatattgacataaagacaccaagaatcatcaaaggtcctaagcaagcccagttt
ggatacactgttcagcaacatgttgctgcaggagcagataaatggttattagtgggagcg
ccatatgaaaacactgggaatttccaaacaggggatgtatataaatgtgcagttaacaaa
cgaactaatggcaacagttgctcaaagctcaatttaggaaagatatctctgaccaacgta
tcagaacgaaagaacaagatgaggctgggtatgacgctcgtgtctaaccccaaagacagc
agctttgtggcttgtggaccattatggtcatatgaatgtggcagttcttactacagtact
ggaatatgctccaaagttaatgcaagcttcaagttttccagaacgattatccctgccttt
cagagatgtgaaacctttatggacatagtcattgttctcgatggctccaactccatctat
ccctggtctgaagtgcagaattttctcataaacattctgcagaagttccatgttggacca
ggtcaaatacaggttggggttgtccagtatggtgagaaagtggtgcatgaattcaaactc
agtgactacaaatcagtagaggaggtggtaaaaagggctcgcagcattgatcagcggggt
ggagaggagaccaacacggctcttggcatcagtacagctcgctcacaagctttcaagcaa
ggaggtcgacggggggccaagaaggtaatgatagttataactgacggagagtcacatgac
aacgcagatctccaacaggccattgaggacagcgagaaggatggcattactcgttatgcc
attgctgtgctcggctactacaaccgcagaggaattaatcctgaggccttcctaaatgaa
atcaaatacatcgccagtgaccccgatgacaaacacttctttaatgtgacagatgagtca
gctctgaatgatattgtcgatgctcttggggagcgaatatttagccttgaaggaaccagt
aagaacggaacggcgtttggcctccagatgtctcaggcaggtttttctgcacacaacgtg
gaggatggaattctggtgggtgcagttggtgcttatgactggaatggagcggtgctgaag
gaaacacgacaggggaaggtgatccccccaaagtcatcctacatgcaggagtttcctgaa
gagctcaaaaaccatggtgcatacttaggatatactgtaacatctgtggtgtcatccaga
aatggtcgcctgctagtagcaggagctccacgatttaaccacactggcaaagtcattatc
ttcactttgaagaatacggggaacctcaccatcctgcactcactcaagggccatcagatc
ggctcctactatggtagtgagattgcacctctggatatcgatggagatggcataactgac
aaccttttggtggcagcaccaatgtttttcagtgcaggcttggagaaagggaaggtctac
atctacagagtaactgaactgaatcgtttcatcccagaaggagcattggaaatccacaac
ggtggccagaacgctcgctttgggtcctccctcgctcctgtccctgacctcaatggtgat
ggctttaacgacttggtggtgggagctccgctggaagatgaccacaaaggggctatttat
gttttttttagccagcacaacagaatactacggaaatataaacagagaatagcagccgta
gatttggctgcaggcctgcagtattttggccgcagtattcatggcaccatggatatgaat
gatgatggtttagtggacctggcagtgggttccctcggtgctgctgttctcctctggtca
aagagcgtcgtaaggatatatactaatgtcaggtttgaacccagtaaggttaacatcttt
atgaaagactgtcagcgtggaggcaaagatgtgacttgcatgtcagctattgtgtgcttc
aacatcactgccaggacggccgttcctcccacacaggaaattgggatcaggtataatgtc
tccattttggagagacgtttcaatcctcgggccatattggatcaaccaaacaagatgcaa
cctcaaaacctgacgctctctcctggtgaagaggcctgtgaatacatctacttccatgtc
atggagaccaccgactatgcaagacctatagtgtttgctgtgcaagtgggattacaagat
ctggaccagggacctgttcttgatgacaggtggcctgttgttgtaaagaccgagctgccc
ttctggaatggctgtgatgaggatgaccgctgcatgcctgacctttcattgcagagcaaa
aacgacctgatgactcgaaaacagttctgtgctcgtcccatgcaatctcgtggccttttc
tgccgccatcaggggggagcagaggcagagggattgctgcgggtgattgaggggaacaag
aaaaggatggtgttagacgtgaaactggagaacagaggagaaaatgcctataatgctgtc
atcaatatcacatattcacccaatctgcgcttctcaagccttatagtcaaggacacatct
gaaataaagattgagtgtaatgcagtggacaggaaaagaaatgagaagatctgcaatgtc
agtgcaccattcatgcgagcaaaatcacaggtcttgtttcgcctggagtttgagttcagt
cgcaccatcttcctggaatacctcagagttctcctggaggcaagcagtgatggtgaagaa
gtgaccatatctgataattttgatgacatctattactcactgaaatatgagggagacctt
ctctttaccagggactcagatccaacacggtatgagatcaaatcagagctctcactggag
gagcctggagttattggccctccatttaacttcacattccagctccagaaccttggatat
ttcccagttagagatctgcagctgaacatcgagatcccagaaatgacaaaaaacgggaac
cagctcctgcagatatttaacctccatgttgatcagagagatggaacacgctgtttacca
ccccagcatatcgcagagagcagagcttcacctgaggatctctcccgcttctcccgcttg
aaccgatccaacacactcaccttgccaatccagtgcacagttaatgtcccctcccacaga
gatgtctgggttcgaatcacaggagccctgagaatagacacattacatgcactgaagttt
aaagtcctggaactgataacaagcgcttcagtggagctcccctctgccagccccatgttt
ttacatgaagaaaagcctgtcagacatataatcctggagatcaggaaggagggagattac
agaatccctacctggataattgttggcagcacgctgggagggctcttattgttggctctt
ctcagtctggctctgtggaagcttgggttcttccacagacagaagcgaaaagacaaggag
gaacaggaggccaacgggaaagtagcagaggaacggtaa
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integrated database retrieval system
