Cyprinodon tularosa (White Sands pupfish): 119775366
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Entry
119775366 CDS
T07496
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04510
Focal adhesion
ctul04512
ECM-receptor interaction
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119775366 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119775366 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119775366 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_I
Laminin_G_3
DUF745
Transcrip_act
Motif
Other DBs
NCBI-GeneID:
119775366
NCBI-ProteinID:
XP_038129242
LinkDB
All DBs
Position
Unknown
AA seq
3053 aa
AA seq
DB search
WFSLCVPGLFPAIFNLASNAEISSNATCGDPEPEVYCKLVDHVPGRRIKNPHCPKCDANS
VLSKERHPITNAIDGTNRWWQSPSIKNGRQFNWITITLDLKQVFQVAYIIIKAANSPRPG
NWILERSLDGVTFDPWQYYAISDSECLSHYNVTPRLGPPTYRSDTEVICTSYYSRLNPLE
NGEIHTSLINGRPGAEDLTPDLLNFTSARYIRLRLQRIRTLYADLMTLSIYDPRDIDPIV
TRRYYYSIKDISVGGMCICYGHAQSCPLDLVTKKLKCVCEHNTCGESCNKCCPGYHQLPW
QPGTHSEGNTCEKCNCHNKASDCFYNQTVSDLSLSLDIHGVRRGGGVCIDCQQNTTGLNC
QTCKDGYYRPAEVSPYSDFPCLECNCDLRGSESPVCSRDDAEAGASAGQCPCKEGFSGQR
CDRCAFGFRDFPRCVRCECNLAGSTNSDPCSPCTCKVNVMGVHCDTCKPGFYNLQQENPL
GCTHCFCFGVSDVCESSAWSVTQVFFPDAVLQPSGSLQASLVISGNDLSIPRNASSGGAH
RHMLWWAAPSRFLGNKLVSYGGQFTCSVVYDVPLDNEDQTLPVLADVIMEGNGQTLRLSP
PLLLFLSPLAEQSVSVEMLPRQFVDDQSGGPITRDDLMLVLADLTSLLVRVHLNASAGGQ
IRLSSVSLDGADSGSGSGLQAAAVEMCECPSGYSGTSCEACLPGFFRVGGVLFGGNCMQC
ECNSHSTQCDISGVCEGCTNNTAGPHCDQCLPGFYGDPTKEECRRCPCPLMEPSNSFSPT
CVLDASGEVSCDQCQHGYTGSNCERCASGFYGNPQVVGGACVSCECNGNANFSEDGYCDS
VTGECLQCLGNTAGKHCELCRPGYYGDAVLAKDCKDCGCDVNGSLSGVCDITTGQCLCRE
NVTGRTCDRCKSGFFGLQSGRGCQPCGCSQSGSESESCDEDGQCHCKKGVAGVKCDCCGH
GYYGYRGTNCTECICERTRGNCDPDSGECVCPPNTEGDTCDRCKKGFWGIDHVTGCKPCS
CSPAGSSAPQCDLLTGQCPCRDGFSGRSCDRCAFGHYGYPSCSACSCDLAGTHETFCNRT
LGVCECGRTGECGCKPGVSGRRCEECVSGWFALSDQNPNGCSECFCSGLSRDCEEQGGLR
RVSVSMGQSTDVLSLVSLSSLQSVAAGVFQHGGEMLFDARQLNSSGLAGPLYWRLPPHVE
GNQLMSYGGLLSYIITFYAEDGSGLSNQEPQILMRGGTLRKHVIYTDMVAPSNGIATQHD
IRLMEHEWKYFNSVSQRSVSRADFMSVLSNVQNILIKASYGTGLQQSRISNITMETAVKA
ESGDSREKARLIESCLCPPGYAGLSCQECAVGFFRQPLSELPPQSLKTMLVRPCVPCRCN
NHSSSCDPETGDCQDCQHHTSGPQCNVCAPGYYGNISGSASDCSLCACPLLSNSFSPSCE
AEGADYRCTACLTGYEGRHCERCSAGYHGNPSSPGGACSLCGCSGWGSLHRGCDEVTGQC
ECKPGVRGQSCDQCEERHVLQQEECVPCDDGCTGVLLDDLETLSSYFLSVNLSAVAMAPH
WQLVPLENQSKVLKARISSDRAVASHLSALDQEVKHLTSDLSAAQQQVTRLSDSLMDLHI
STNQSCTHSQLLLGRVSSLQDSIQELQKEAEHLNQTNEEEFYVSRRTHLLQELESMMETI
RGLNLTAATSSANQELRSSESLLTSLQLDLLSRWAAGENKSRLLRDSLSVAMTTLKNATI
QLSEAERRNNETHKLLEAVGDLQRHHQVGLQNLTSEVLSVDRLLEDSQDLLEDTLSLAAD
FSNRSAVELLASQLDQWRPQLRKHVEALVVGLKMTDALENVNRAERHACQLKRHADLLHR
SMFNVSHNDTQTAHSEDDITQLVGSAHQEASAGLNSASLALNMSVQSGRRLSEEGGATLN
ISSHVLEESRQLNITAEDLQINVSMVTTRLRLVRDGVLNSSALLRQPISELQRLPIGSSR
STKQAEVQAGAANSSLQGAMQRLQRLRQQLENSSSVVEKTNITVRETNSLMSRVQTAANE
VQRHLEEAEHRTQHLMERVKPLSVLRETLSRNLSDIRELIDQARRQAASIKVAVQADRDC
VRTYKPPIQSSNFNTLSLILKTSHQNNLLFYLGSNITKDFLAVEMHHGKVSLLWDLGSGT
GRLHFPQTFITNNRWTKINVTRFGARASLSVHQLDSESPPLPAVTSLSPGTSRVLDIDRN
TVIHIGGMGANSQAPPVLHTSSFQGCLGEASLNEENIGLWSYYRREGKCGGCFSSPQAEE
TSFYFDGSGYSVVQKSLRATSTSVVLLFKTLSPGGLLLYLASNNTKDFLSLELVEGHVRL
AFDLGSGALIKTSSRKYNTGIWYKVTLQRNKRKGYLSIMAAGQPSVKEVLEAESPGTASD
LNRYDLDPIYIGGFPSSRPIRRQVLSRTYVGCIKNVEIARSNFDLLMDAYGVRKGCVLKA
VRSVSLLSGGFVQISPSSLSKEAEILFTFSSNNQSGVLLAAFGDDRPHRQHFLSLHLVSG
KVVAELGELGGAARRVSLTKSDGESFCNGREHSVIMTLNRKSMSLQVDDEHPKSVSLPGG
LSRLSLSSVFIGGIPPEKEPRLPVGLQALSHQFRGCIQHLVMGGALVDLSVAIRYEGVEF
NSCLLEKSPLRLVDPENPDVEPTPAPADALLAPPTHLSALTAEALTCASDQEPSFLSSAA
QFGSSRHSHMTFIINPSTLRKSVSVRMSVRSHVLDGLMLLLSDSKQMDFVALSLIGGKVR
LSVDLGKGPSSVESSAAVSDGLWHTLSAEVSQRSVSVTVDTLRPASVSIKGNHLDVDRTL
FLGGFPNGVNSRRIGVSSSFSGCIQSVSLNGATLDLSKPISQLDVTSCFTKDQRGSYFNG
SGHAELMHDGYKVGADMSVSVEFRTSQSEGVFLGISSPKVDAVGLEMIDGQVVFNVNNGA
GRVSVRSADRMLCDGQWHHLQARKTKHALTLMVDGRKYSTPNPYPQSTSAETNNPVYLGG
YPAGVKQNCLTVRTRFRGCLRNLQLTKPHLSNHLDLSTAHFLLGVTPNSCPAA
NT seq
9162 nt
NT seq
+upstream
nt +downstream
nt
tggttctctctctgtgttccagggttgtttcctgccatctttaatcttgccagtaatgca
gagatcagcagcaatgctacgtgtggagatccagaaccagaggtctactgtaagcttgtt
gatcacgttcctggacgaagaatcaagaacccacactgccccaaatgtgacgccaactcc
gtcctgtctaaagaacgtcatccaatcaccaacgccatcgatggaaccaataggtggtgg
cagagtccgagcatcaagaatggccgtcagtttaactggataaccatcaccctggacctg
aagcaggtcttccaggtcgcctacatcatcatcaaagcagctaactctccacgaccaggt
aactggatcctggagcgctccctggatggtgtgacctttgacccctggcagtactatgcc
atcagtgactcggagtgtttgtctcattataatgtgacaccaagacttggaccacccacc
tacaggagcgacactgaggtcatctgtacgtcctactactccagactgaaccccttggaa
aatggagagatccacacctctctgattaacgggcgtcccggagcagaggatttgacccct
gacctcctgaactttacatcagctcgttatatcagactgagacttcagcgaatcagaacg
ctctacgctgacctgatgacgttaagcatctatgacccacgggacatcgacccgatcgtg
actcggaggtattattactccatcaaggacatctctgtgggggggatgtgcatctgctac
ggacacgcccagagctgcccgctggacctggttaccaagaaactgaagtgtgtgtgtgaa
cacaacacctgtggggagagctgtaacaagtgttgccctggttaccatcagctgccatgg
caaccaggaactcactctgaaggaaacacctgtgaaaagtgtaactgtcacaacaaggcc
agtgactgtttctacaatcagacggtttcggacctcagtctcagtctggacatccatggc
gttcgtcgggggggcggggtctgcatcgactgtcaacaaaacacaacgggactcaactgc
cagacctgcaaagacggatactacagacctgctgaggtgtctccgtactctgacttcccc
tgcctggagtgtaactgtgacctgagaggatccgaatcaccggtttgcagcagagacgac
gcagaagcaggtgcgtctgcaggtcagtgtccgtgtaaggagggcttctcgggtcagcgg
tgtgatcgctgtgcgtttggattcagagacttcccgcggtgcgttcgctgtgagtgcaac
ctggcaggaagcaccaacagcgacccctgcagcccctgcacctgcaaggtcaatgtgatg
ggagtccactgtgacacctgtaaaccgggcttctataacctgcagcaggagaacccgctg
ggctgcacccactgcttctgttttggtgtctctgatgtctgtgagagctctgcttggtcc
gtcactcaggtgtttttcccagatgctgtcctccaaccatccgggtcgctccaagcctct
ctggtcatcagtgggaatgacctcagcattcccaggaatgcctcctctggcggcgcacac
agacacatgctctggtgggcggcccccagccgtttccttggcaacaagctggtgtcctat
ggaggacagttcacctgctctgtggtttatgacgtccccctggacaatgaggaccagact
ctgcctgtccttgctgatgtcatcatggagggtaacggccaaactctccgtctctcgccc
cctctgctgctcttcctctctcccttggctgagcagtctgtcagtgtggagatgcttcca
cggcagtttgtggacgatcaaagcggtggtcccataactcgagatgacctgatgctggtt
ctggctgatctgacctcgctattggtccgagtccacctgaacgcttctgctggaggacag
atacggctcagctcagtgtccctggatggagcggactctggctccggttctggtcttcag
gcagccgccgtggagatgtgcgaatgtccgtcgggttacagtggaacttcctgcgaggcc
tgcctaccgggattcttcagagtaggcggggttctgttcggaggcaactgtatgcagtgt
gaatgcaattcccactccactcagtgtgacatcagtggggtctgtgagggctgcacaaac
aacaccgccggtcctcactgtgatcagtgccttcctggtttctacggcgacccaacaaag
gaggagtgtcggaggtgtccgtgtcctttgatggagccgtccaacagtttcagtcccacc
tgtgtactggatgcgtccggtgaggtgtcatgtgaccagtgccagcatggatacaccggg
tcaaactgtgagaggtgtgccagtggtttctatggtaacccccaggtagtgggcggggct
tgtgtgagctgcgagtgtaacggcaatgctaacttcagtgaggacggatactgtgattct
gtgacgggggaatgtctgcagtgcctcggcaacacggcaggaaaacactgcgagctgtgt
cgtccgggttactatggcgacgctgtcctcgccaaagattgcaaagactgcggctgtgat
gtaaacggctccctctctggtgtatgtgacatcacaacaggccagtgtctgtgcagagag
aacgtgacaggacgcacctgtgaccgttgcaagtcggggttcttcgggcttcaaagtggg
cggggctgtcagccctgcggctgcagccaatcaggatctgagtctgagtcatgtgacgag
gacggccagtgccactgcaaaaagggcgtagctggggtcaagtgcgattgctgtggccat
ggttactatggctaccgcggcaccaactgcacagaatgcatctgtgagcgcactagggga
aactgcgaccctgacagcggagagtgtgtctgcccccccaacacagagggagacacctgc
gacaggtgtaagaagggattctggggcattgaccacgtcacaggatgcaagccctgcagc
tgcagcccagcaggaagctccgccccccagtgtgacctgctgactgggcagtgtccctgc
agggacggattctctggcaggtcatgtgatcgatgcgcatttggtcactacggttaccca
tcatgctcagcgtgcagctgtgatttggcaggaacccatgagacgttctgcaacagaacg
ctcggcgtatgtgaatgtggacggaccggagagtgtgggtgcaagcctggcgtgtcgggt
cggcgctgtgaggagtgcgtttctggttggttcgctctatcagaccagaatccaaacgga
tgttcagagtgtttctgttctggactgagccgagactgtgaggagcagggaggcctgcgc
cgagtgtctgtcagtatgggtcagtctacagacgtcctgtcgttggtcagtctgtccagc
ctgcagtctgtagcagctggggtgttccaacatggcggcgaaatgctgtttgatgcccgg
cagttaaacagcagtggactcgctggccccctctactggaggctgcccccccatgttgaa
ggaaaccagctgatgtcatatggcggcctgctgtcttacatcatcactttctatgctgag
gatggctcaggactgtccaatcaggagcctcagatactcatgaggggcgggaccctaagg
aagcacgtcatctacactgacatggttgctcctagcaacggcattgcgacacagcatgac
atcaggctgatggagcacgagtggaaatatttcaactcggtgtctcagaggtcggtgagc
cgtgcagattttatgtccgtcctcagtaacgtccagaacatcctgatcaaggcttcgtac
ggaaccgggctgcagcagagcaggatttctaacatcaccatggagacggctgtgaaggcg
gagtcaggtgactcccgggaaaaggccagactgatcgagtcctgcctctgtccgcccgga
tacgccggactgtcctgtcaggagtgtgcggtgggttttttccggcagcccctgtctgag
ctccctcctcagagtctgaagaccatgttggtgcgtccctgtgttccgtgtcgctgcaac
aaccatagttccagttgtgacccagagaccggagactgtcaggactgtcagcatcatacc
agcgggccgcaatgcaacgtctgcgctccgggttactatggaaacatcagcggctctgca
agcgactgttccctgtgtgcctgccccctactgagcaacagtttcagtcccagctgtgaa
gcagagggcgccgattaccgctgcaccgcctgcctgaccggatacgaaggcagacactgt
gagaggtgttcagctggttaccatggaaacccatcctcgccaggcggggcttgctcgctc
tgcggctgcagcgggtggggctccctgcatcgggggtgtgatgaggtcaccggacagtgt
gagtgtaagccaggggtcagaggtcagtcatgtgaccagtgtgaggaacgccacgtcctg
cagcaggaagagtgcgtcccttgtgacgatggctgcaccggcgttctgctggacgacctg
gaaacactcagcagctacttcctgtccgtcaacctgagcgccgtcgccatggcgcctcac
tggcagctggtgccgctggagaatcagagcaaagtgctgaaggcccggatctcctcagac
agagccgtagcttcacacctgtctgctttggaccaggaggtgaagcacctgacctctgac
ctcagcgcagcgcagcagcaggtgacgcgtctgtctgacagcctgatggatcttcacatc
tccaccaaccagagctgcacccacagccagctgctgctggggagggtcagcagccttcaa
gacagcattcaggagctgcagaaggaggcggagcatctgaaccagaccaatgaggaggag
ttctatgtgagcagaaggacccatctactgcaggagctggagtccatgatggagaccatc
agaggtttaaacctcacagcagcaacgtcatcagccaatcaggagctccgctcctcagag
tctctgctcacctcgctgcagctggatttactgtccaggtgggctgcaggtgagaacaag
tcccgcctcctcagagactcactctctgttgccatgacaacactgaagaatgcaaccatc
cagctgagtgaagctgaacggagaaacaatgaaacacacaaacttctggaagctgtagga
gatctgcagcgccaccatcaggtgggtcttcagaacctgacttctgaggttctgtctgtg
gacagactgctggaggacagtcaggacctgctggaggacaccctgagtctggctgcagac
ttctcaaaccgcagcgcagtggagctgttggccagccagctggatcagtggcgccctcag
ctcaggaagcacgtggaagccttggtggttggcctgaaaatgaccgacgctctggagaac
gtcaaccgcgcagaacgccacgcctgccagctgaaacgccacgccgacctgctgcataga
tccatgttcaacgtgtcccacaacgacacccagacggctcattcagaagatgacatcact
cagctagttggctccgcccaccaggaagcctcggcgggccttaactctgcctcgctcgct
ctcaacatgagcgtccaatcagggcggaggctgtcggaagagggcggagccacgctgaac
atctcatcccatgttttagaagaaagtcggcagctcaacattacagctgaagacctgcag
attaatgtttccatggtaaccaccagactgcgattggtcagagacggtgtgcttaactcc
agtgcactgctccgccagccaatcagtgagctgcagaggcttcctattggctcatccagg
tccaccaagcaggcggaggttcaggctggagcagcaaactccagcctgcagggggcgatg
cagaggctgcagagactcaggcagcagctggagaattcttcttctgtggtggagaagacc
aacatcactgtgagggagaccaacagcctaatgagtcgggttcagactgcagctaacgag
gtgcagcgccacctagaggaggcggagcatcgcacacagcatctgatggaaagagtaaag
cccctgagcgtgctgagagaaaccctgagcaggaatctgtcggacatcagggagctgatc
gatcaggcccgaagacaggcggcatcgatcaaggtggcggtgcaggcagacagggactgt
gttcggacctacaaaccacctattcagtccagtaacttcaacactctgagtctgatcctg
aagacgtcccatcaaaataacctgctcttctacctgggaagcaacatcacgaaggacttc
ctggcggtagagatgcatcatgggaaggtttcgttgctgtgggacctgggctctggcaca
ggacggctgcacttccctcaaacattcatcacaaacaaccgatggaccaaaatcaacgtt
accaggttcggagcacgcgcctctctctccgtccatcagctggactctgagtcgccccct
ctgccggcggtgacgtcgctttcaccgggaacatcccgggttttggacatcgacagaaac
acggtgatccacatcggaggaatgggagccaacagtcaggctcctccagtgctgcacaca
tcttccttccaaggatgcctgggtgaggcatcgctgaatgaggagaacattggtctgtgg
agctactaccgccgggaggggaagtgtggaggctgcttcagcagtccccaggcagaggag
acgtctttctactttgatggctctggatattctgtggtccagaagtctctgagagccacg
tccacctctgtggtgctgctgtttaaaactttgtctccaggtggactgctgctgtacctg
gcctccaacaacacgaaggacttcctgtctctagaactggttgaggggcatgtccgtctg
gcatttgacctgggctcaggtgctcttatcaagacctccagcaggaagtacaacacagga
atttggtacaaggtcaccctgcagaggaacaagcgcaaaggttacctttccatcatggca
gccggccagccatcggtgaaggaggtgttagaggcggagtctccaggaacggcctctgac
ctcaaccgctatgacctggacccgatctacataggcggattcccttcttccagacccatc
aggcgacaggtgttatcccggacgtatgttggatgtattaaaaacgtggagattgctcgc
tccaactttgacttgctgatggacgcatatggagtccggaagggctgcgtcctaaaggcg
gtgcggagtgtctctctgttgtctggaggcttcgttcagatcagcccttcgtcactcagt
aaggaggcagagatcctcttcaccttctcctccaacaaccaatcaggagtcctcctggca
gccttcggtgacgaccgacctcaccggcagcacttcctgtcgctgcacctggtctcaggt
aaagtggtggcggagcttggcgaactgggcggagccgcgcgaagggtttcgctcacaaag
tctgatggagaatcattctgcaatggaagagagcactcagtgattatgactttgaacagg
aagtctatgtccctgcaggtggacgatgaacacccgaagtctgtctctctgccgggagga
ttgtctcggctgtctttgtcctccgtcttcatcggtggaatccctcctgagaaggagccc
cgcctgccggtcggactgcaagctctgtcccaccagttcagaggctgtattcaacacctg
gtgatgggcggagcgcttgttgacctatcagtcgccatcaggtatgagggggtggagttt
aacagctgcctgttggagaagagccctttgaggttggtagatcccgaaaaccctgatgtg
gaaccaacacctgcacctgcagacgctcttttagccccgcccacacatctgagcgccctc
actgctgaagcgctaacgtgtgcgtcggaccaggaaccttccttcctgtcgtcagctgct
cagtttggttcatccaggcacagtcacatgaccttcattatcaaccccagcacacttaga
aagagcgtatcggtgaggatgtcggttcgaagccacgttctggatggcctgatgctgctc
ctctccgactccaagcagatggactttgttgccctcagtcttataggggggaaagtcagg
ctgtcagtcgacttggggaaaggcccctcctccgtcgagtcgtctgccgctgtcagcgat
ggactgtggcacacgctgagcgccgaggtgagccagaggtccgtctcagtgacggtggac
actttacgtccagcgtccgtctccatcaaagggaaccacctggatgtggacaggacactt
ttcctcggaggttttcctaatggtgtgaacagcaggaggatcggggttagctccagtttc
tcaggttgcatccagtccgtcagtctgaacggcgccacactggatttgtccaagcccatc
tcgcagcttgatgtcacttcctgcttcaccaaggatcagagaggaagttacttcaatggc
agcgggcatgctgaactgatgcatgatgggtataaggttggtgccgatatgtcggtgtct
gtggagttccggaccagccaatcagaaggagtctttttgggaatcagcagtccaaaagtg
gatgcggtcggactggagatgattgacggccaggtggtcttcaatgtgaacaacggcgca
ggtcgggtgtcggtgcgctccgctgaccggatgctgtgtgacggacagtggcaccacctg
caggccaggaagaccaagcacgccctgactctgatggtagatgggaggaaatacagcacc
cccaacccctacccacaatccacctctgctgagaccaacaacccagtgtacctggggggt
tatccagctggagtcaaacagaactgcctgaccgtcaggaccaggttcagggggtgtctg
aggaacctgcagctcaccaagcctcacctgagcaaccacctggatctcagcaccgcccac
ttcctgctgggcgttactcccaattcatgccccgctgcatag
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integrated database retrieval system
