Cyprinodon tularosa (White Sands pupfish): 119775655
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Entry
119775655 CDS
T07496
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03030
DNA replication
ctul03420
Nucleotide excision repair
ctul03430
Mismatch repair
ctul03440
Homologous recombination
ctul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119775655
03420 Nucleotide excision repair
119775655
03430 Mismatch repair
119775655
03440 Homologous recombination
119775655
03460 Fanconi anemia pathway
119775655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119775655
03032 DNA replication proteins [BR:
ctul03032
]
119775655
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119775655
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119775655
DNA replication proteins [BR:
ctul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119775655
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119775655
MMR (mismatch excision repair)
119775655
DSBR (double strand breaks repair)
HR (homologous recombination)
119775655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Extensin_1
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
119775655
NCBI-ProteinID:
XP_038129634
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MPVKLTQGAVKALYNGTPVHNPVLQLMNIRRLTTSDSPRYRLAMSDGQHFLSAFLLATQL
NHLAEDDLLVPNCVCLLKRTTTNTLSDGRQVVVVVEMEVLKSAEETGGKIGNPKPYSTDG
KQASPHMVSSNTSEPASTSAAELPGPSGTNSNNSRGWGKKFTGKAPMTASPMKTCPMEES
PMKTSPMKGSPMKTSPMKGSPMKTSPMKGSPMKVSPIKATTSSPSAIPKVIPISNLNPYI
SKWTIRARVTNKSNIRNWSNSRGEGKLFSFEIVDESGEIKITAFNNEVDKFFSLVEQGKV
YYISKATLKIANKQYTTLKNDYEMTLHAHSSIVPCEDTHDIPSMQCDFVPIGDLENRDKD
AIIDIIGVCKSAEDVSRITTKNSREVSKRAINLIDTTGKVVTVTLWGEEAEKFDGSGQPV
VAIKGARLSDFGGRSLSALFSSTVMVNPDLPEAFRLRVWYDKEGYAVDSQSLTETMSVSI
GPKMNWKTLSDVKNENMGHGEKAEYFSCVATVVYMRKENCLYQACPSADCNKKVIDQQNG
FYRCEKCNREFPSFKYRLLLSANLADFGDNQWVTCFQETAEVLLGRKAEELGQLRETDEA
EFDEVFQKANFKTHIFKNRVKFETYNDESRVKVTVMEVLPVDHREYSRRLISNIQKLAC
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaaaactaacacaaggggcagttaaagccctctacaatggaaccccagtgcac
aatccagtgctacaattaatgaacatccgtaggctcactacctcagattcacctaggtac
cgtcttgcaatgagtgatggtcagcatttcctgtctgcgttcctgctggctacccagtta
aaccatctagcagaagacgaccttcttgtccccaattgtgtttgcttgttaaagaggacc
accaccaacactttgtcagatggccggcaggtagtggttgttgtcgaaatggaggttttg
aaatcagctgaggaaactggtggaaagattggaaatcctaaaccatattcaacagatggt
aagcaggcctctccacatatggtgtcgtcaaacacctctgaaccagcttccacttcagct
gctgaattacctggaccctccggcacaaatagcaacaacagcagaggctgggggaaaaaa
tttacaggaaaagcccccatgactgcatcacctatgaagacttgtcccatggaagagtca
cccatgaagacctcccctatgaaagggtcacccatgaagacctcccccatgaaagggtca
cccatgaagacatcccccatgaaagggtcacccatgaaggtctctcccataaaggccact
accagttcacctagtgctatcccaaaagtgatccccatttctaacctcaatccatacatt
agcaagtggaccatcagagccagagtcacaaacaaatccaatatccgtaactggagtaat
tccagaggagagggaaagctcttctcctttgagatagtagatgagagtggtgaaatcaag
attacagccttcaacaacgaagtggacaagtttttctctctagtggagcaaggcaaggtg
tactacatctcaaaggctactctaaagatagccaacaaacagtacaccactctgaagaac
gactatgagatgacccttcatgctcattcatctattgtgccttgtgaggacacccacgat
atcccatcaatgcagtgtgactttgtgcctattggagacttggaaaacagagacaaagat
gccattattgatataattggagtgtgcaagagtgcagaggatgtatcccgtatcaccaca
aagaacagcagagaagtctccaagagggccatcaacctaatagacaccaccggtaaagtg
gtgacagtcactctgtggggggaggaggcggagaagtttgacggctcaggacagcctgtt
gttgccatcaaaggagctcgcttgtctgattttggaggcagatctctctcagctttgttc
agttcaacagtcatggtcaacccagatttacccgaagccttcagacttagggtctggtat
gacaaggaaggttatgcagtcgacagccagtcattaacagaaaccatgtcagtcagcatt
ggaccaaagatgaactggaaaacgctgagcgatgttaagaatgaaaacatgggacacggc
gagaaggcggagtatttcagctgtgtggcgacagtagtgtacatgcgtaaagagaattgc
ttgtatcaggcatgtccatctgcagactgcaacaagaaggtgatagaccaacagaacggt
ttttaccgctgcgaaaagtgtaacagagagttccctagcttcaaatatagactcctactt
tcggctaacttggcagacttcggggataaccagtgggtgacatgcttccaggagacagct
gaggttctgctgggtcgcaaggcagaggagctgggacagctcagagaaacagacgaggct
gagttcgatgaagtcttccagaaagccaacttcaaaacacacatctttaaaaaccgagtc
aaattcgagacgtataacgatgagagtcgggtgaaagtcaccgtgatggaggtgcttcct
gtcgaccacagagaatacagcaggagactgatcagtaacatccagaaattggcttgctga
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integrated database retrieval system
