KEGG   Cyprinodon tularosa (White Sands pupfish): 119775699
Entry
119775699         CDS       T07496                                 
Name
(RefSeq) LOW QUALITY PROTEIN: dynein intermediate chain 1, axonemal-like
  KO
K10409  dynein axonemal intermediate chain 1
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    119775699
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ctul03037]
    119775699
   04812 Cytoskeleton proteins [BR:ctul04812]
    119775699
Cilium and associated proteins [BR:ctul03037]
 Motile cilia and associated proteins
  Dynein arm
   119775699
Cytoskeleton proteins [BR:ctul04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     119775699
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_IFT140_1st Beta-prop_HPS5 EIF3I Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_RSE1_2nd Beta-prop_TEP1_C Beta-prop_LRRK2 Lactonase WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 119775699
NCBI-ProteinID: XP_038129694
LinkDB
Position
Unknown
AA seq 638 aa
MSMYKRKKAARGGKDKEEAVDAHTDVDKLVNLTATVKPPNHLELSETELNEEFCRILTTS
NPHAPKNVVCFSFKERCYKPLRFVAQTAVLFNLEGSIVHKDHSYTFEEGGEGKEVVDEER
PDTAASKPKKEAKATNLFFIERASQTHRNVSMERSSQTEPPSRINFSATANQWKIYDAYL
EELQKQEKNKEKQKTTLLKKDTSDSKKKVTLMETRRDDISKVEKVAKIVERAINRDLMDD
RALKIFGDHSHEYKDQELSLFPLWMFQYNAVRNLSVTALCWNNKYLDLFAVGLRSYECRQ
GDGMVLFFSMKNPTVPEYIYSTPSGVCSLDIHPHHSYLLAVGFYDGCVAVYNLKKKEPHP
VDRSTVKNGKHTEPVWQVRWQKDDMDGNHIFYSVSADSRVVSWTLVKHKLISTDIIRLTL
KGAASDAPHAAQRSNFSTGRSMDFNKQINNLFLVGTEQGKIHKCSKIYSNLFLETYEAHN
MPVDTVKWNHFHPNIFISCSYDWTVKLWEHTINTPLLTIDLYEPVADVAWAPYSSTVFAA
ATIDGKVHVFDLSISTEEAIHQQQVMEKETKPTRIEFNPIHPMIIVGDDKGNVASLKIIP
NPHEKPKVKKDQEFANGPEAEVAKLDKVVNKLLIWLDI
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgtccatgtataaaaggaaaaaggctgctcgtggcggaaaggataaagaagaagctgtg
gatgctcatacagatgtggataaattggttaatttgacagccactgtgaagcctccaaat
catctggagctctctgagactgagttgaacgaggagttttgtagaattctgacaacaagc
aacccgcatgctcccaaaaatgttgtttgcttcagctttaaggaacgttgctataagccc
ctcagatttgtggctcaaacagctgttctctttaatttggaggggagcattgttcacaaa
gatcatagctacacttttgaggaaggaggagaaggcaaagaagttgtagacgaggagaga
ccagacactgccgcctcaaaacccaagaaagaggcaaaagctacaaatctattcttcatt
gaaagggcatcacagactcacagaaatgtttcaatggaaagaagctctcagactgagcct
ccttcacgcatcaacttttctgccactgcaaatcaatggaaaatttatgacgcttatttg
gaggaactgcagaagcaagaaaaaaataaagagaagcagaaaaccacactattgaaaaaa
gatactagtgacagcaagaagaaagtgacactgatggagacccggagggatgatatctct
aaagtggaaaaggtggccaagatcgttgaacgagcgatcaaccgagatctgatggatgac
agagcacttaagatctttggggatcactctcatgagtacaaagaccaggagctctccctc
ttccctctgtggatgtttcagtacaacgcagtcagaaacttgtctgtcactgccctctgc
tggaataacaaatacctggacctgtttgccgtgggattgcgatcatatgaatgcagacag
ggagatggtatggttctcttcttctccatgaagaacccaactgttccagagtacatctac
tccacaccctccggggtctgtagcctcgacatccatccacaccactcgtatctactggca
gtgggcttctacgatggatgcgtggccgtttacaacttgaaaaagaaagaaccgcaccct
gttgacaggagtacggtgaagaatggcaagcacacagagcctgtctggcaggtgcgctgg
cagaaagatgatatggatggcaaccatattttttattctgtgtcagctgatagcagagtg
gtgtcctggacacttgtcaagcacaagcttatttcaacggacattatcagactgacgctg
aaaggtgctgcctctgatgcaccacatgcagcacagcggtccaacttttctactggtagg
tcaatggacttcaataaacagattaataatctgtttttagttggcaccgagcaagggaaa
attcataagtgctcgaagatttactccaatctgttcctggagacttatgaggcccacaac
atgccagtggatactgtgaagtggaaccacttccatcccaacatcttcatttcttgcagt
tatgactggactgttaagttgtgggagcacaccatcaacactccactgctcaccattgat
ctttatgaacctgttgcggatgttgcatgggctccttactcctccactgtgtttgctgct
gcgacaatagatggaaaggttcacgtttttgaccttagtatcagcacagaagaggccatc
caccagcagcaagtgatggaaaaggagaccaagccgacacgcattgagtttaatcccatc
catcccatgattatcgtgggtgatgacaaagggaatgttgccagcctcaaaatcatccca
aatccccacgagaagcctaaggtgaagaaggaccaggagtttgccaacggtccagaagca
gaagtagcaaagctggacaaggtggtcaacaaactattgatatggcttgacatataa

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