Cyprinodon tularosa (White Sands pupfish): 119776069
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Entry
119776069 CDS
T07496
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctul03036
]
119776069 (tdrd12)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
119776069 (tdrd12)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119776069 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
119776069
NCBI-ProteinID:
XP_038130214
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MVKISIVKVENPSCLWGRVFGGSGETTEDYADLQTQMNLFYHDVTQDLHSLKPASFEEGQ
VYVVYWALKKSWCRAVVLSIIRDPTCLQTLCFLVDHGEVTVVPSENMRVASEKFLKLPFW
VRKFHLSRVQPTTLRVSFFAEKAELKPAAQWDCSATLYLHNLLQASVQTEVVLHEWKSES
TAIELFVTIGNIKICVNDDLVAKKFAYYSSSGLDACDRAPLPCSYSILTPTLSKCSHKQT
EQNLRSPGEHGGSSKSPDASEAEDGLTASTLPQSGFPDMIPCEEEHFNHGRKASNTDRFL
KFLSPDRGHQSTLSKTNYELNNFKPEQTEISEASMELNATSRVSDTNVLNTSEERRTEAE
ICKIEDDMICSRLLEWLNPEPFNSDPDATDEVALPDDPWIKGVLVHSPVAVEPWETVEDA
PIVDSLRKVLRKKNYRTLSPAESYSWPAVARGCNTFIISQNADQPLGYLVPLLTHLLLNS
VHVSHASSSGPIAVLLCPGWEKAQLVYDLLEETNVSQTLHPLIMLVGIGKDQAKDVKIPK
NCLLLVTTPFSFVRLLSSHCFLFLRLYHLLLDEADELFTRAPDQMESILQHFQKVTSRVE
KGSCPRQLIAAARRWSIPMEKLISCHMPNPYIVISVLEEAALYGNIQQVVLMTPENNKIS
VLLDALDFCPDVGQKTLIVANSAQEVEDVFQALSSQSAFCLKVHEGLLDQLDFVLQQWKK
TIGPRTHIVLVSTSECLKGLGIRDASCIVHFGFPSSPRLFGSRLFCMAEHFQNLSVQRKD
GSRVTRSLLLVSERNARHVVGVLRYLGRTATHLPPVLLRFAEWVCLSREEQKISRPLCRY
LKSFGVCRDRNACLDRHSFNPHLDQSALPTSGVIEVLPLYIKTASVYYGRLVNSSDEGFE
SMASEINSYYADTKPGAKELLQGALYAVQEDGVFHRVKILSVPDPGESLFNSISVRFVDI
GKEVEVKSYQVLELPEQFHSLPHQAVEIVVCGVKPVDAEMEWHPKVTRAISQKIRGLQHR
AGVVLSLGNTLFVHHMVRVTKMAGTRALINEYSLQSEILKTGMGVSNPEHLDVLRELLQD
SVVNQTKDGGPTNRTMAGFLSEEEMLTAEFRDHEKHEALDPYQLTLDPSGPMPPPKRSTV
PEPEEPEAPRLPVPTQTPLLHRGTDGEQRNRRLLEETMRSDESDKDCRETDEADAAASVS
LHKNGMADGDEHVVSAGGEVCNKSFSPQVVWFQTCDSVIVTVKLMNPEVQQCDFYTDRVV
YSGRVNGRSYRADLELHQNIAADACHWEMKSNQPILKLVKQEPGYWERLVRGKNIFVSFD
MDHVDEKEDESSGGLRFVESPEAGSCYLSSDSDSD
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatatcgatagtgaaggtggagaacccatcttgcctctggggtcgggttttt
ggcggaagtggagaaaccacagaggattatgctgatctccagacacagatgaacctcttc
taccatgatgtcactcaggaccttcacagcctgaaacctgcatcatttgaagaaggacag
gtgtacgtggtatactgggccctaaagaagtcttggtgtcgtgctgtggttctttccatc
atcagggacccgacatgccttcagaccctctgtttcctggttgatcatggagaagttact
gtggttccctctgaaaatatgagggtagcatcagagaagttcctcaagcttcctttctgg
gtaaggaagttccatctgtccagagttcaaccaacaaccctgcgggtgtctttctttgca
gaaaaagccgaactcaaacctgcagctcagtgggactgctctgctacgctgtacctgcac
aacttgctccaagcttctgtccaaacagaagtggtgctgcatgagtggaagtcagagtct
actgccattgagctctttgtgaccatcggcaacatcaagatctgtgtgaacgatgacctg
gtggccaaaaagtttgcttattacagcagcagtggcctggacgcctgcgacagagcccct
cttccctgttcctatagcatcctgactccgaccctttcaaagtgctcccacaagcagaca
gagcagaatctacgttctccgggtgaacatggagggtcttcaaaaagtcctgatgcttca
gaagcagaggacgggctgactgcttccactctgcctcagagcggattccctgatatgatt
ccatgcgaggaagagcatttcaatcatggccgaaaagcttcaaacactgacaggtttctg
aagtttctgagtcctgacagaggccatcaatccacactctccaaaactaattatgagctt
aacaactttaaacctgaacagacagaaatttctgaagcctccatggagctgaatgccacc
agcagggtctcagacaccaatgttttgaatacttcagaggagcgcagaacagaagcagag
atatgcaagattgaagacgacatgatctgttcacgcctgttggagtggttgaacccagag
ccttttaactcggatcctgatgcgacggatgaggtggccttacctgatgatccctggatc
aagggtgttctagtgcattcacctgttgcagtggagccatgggaaaccgtggaagatgct
cccatcgttgattctctccgtaaggtgttgcgtaagaaaaactacagaactctctctcca
gctgagagctacagttggccagctgtggctcgtggttgcaacacatttattatttctcag
aatgctgatcagcctcttggttacctcgtcccccttctcacccatctcctgctgaactcc
gtccacgtgtcccacgcctccagttcaggaccgatagcggtgctgctgtgtccaggctgg
gagaaggcgcagctagtttacgacctgctggaggagaccaacgtttctcagacccttcac
ccacttatcatgttggtgggcattggcaaagatcaagccaaggatgtaaaaatccctaaa
aactgcctgctgttggtgaccacccctttcagtttcgtccgtttgctgtcttctcactgc
tttctgtttttgcggctttaccatctactgttggacgaagctgacgaactcttcactcgt
gcgcctgatcagatggaatccatcctacagcattttcagaaggtgacatccagagtagag
aaaggatcctgtcctcggcagctgattgctgcagccagaagatggagcattccaatggag
aagctaatctcctgtcacatgcccaacccttacattgtcataagtgtcctggaggaagct
gcgctctacggcaatattcagcaggtcgtcctaatgactcctgagaacaacaagatatct
gtacttttggacgccttggatttctgtcctgatgttggacagaagacactgattgtggca
aactctgctcaggaggttgaagatgtgtttcaggctctcagcagccaatcagctttctgc
ctcaaggtccacgagggattgctggaccagctggactttgtcctccagcagtggaagaaa
accattggtcctcgcactcatattgttctcgtgagcaccagtgagtgtttgaagggtctt
ggcatcagagatgcatcttgtatcgtccattttggatttccgtcctcgcccagactgttt
ggcagcagacttttctgtatggcagaacatttccaaaatctatctgtacaacgtaaagat
ggttcccgggtcaccaggtcattgctgctggtctctgaaagaaatgctcgccatgttgtg
ggagttctccgttacctggggcgcactgctacgcatctacctcctgtgcttctgagattt
gctgaatgggtgtgtttgtcccgtgaagaacagaagatcagtcgacctctctgtagatat
ctaaagagctttggagtctgcagggacaggaatgcatgtcttgatcgccacagcttcaac
ccacatttggatcaatctgcgctccctacatccggagtcattgaagttttgcctctttac
ataaagacagcatctgtctattatggtcgtttggtgaattccagcgatgaaggatttgag
tcgatggcttctgagataaactcgtattatgccgacacaaagccaggagccaaggagctg
ctgcagggggctttatatgctgtgcaagaggacggggtcttccacagggtgaagatcctg
tcggtacctgaccccggtgagagcctgtttaacagcatctctgttcggttcgttgatatc
ggaaaggaagtggaggtcaaatcctatcaggtcctcgagctcccagagcagtttcattct
ctgccccaccaagctgttgagatagtggtgtgtggggtaaagccagtcgatgctgagatg
gagtggcatccaaaggtcacaagagccatcagccagaaaatccggggtctgcagcatcga
gcgggagttgttctgagcctgggaaacacgctttttgtccatcacatggtgcgggttact
aagatggcaggcaccagagccctcatcaatgagtacagccttcagtctgagatcctgaag
accgggatgggagttagcaaccccgagcatctggatgtactaagagaactgcttcaggac
agtgtggtcaaccaaaccaaggatggaggtcccactaacagaacgatggctggcttcctg
tcagaggaagagatgctgactgcagagttcagagaccatgagaaacatgaagctttagat
ccttatcaactgacgttagatccatctggacccatgcctcctccaaaaaggtccacagtg
ccggaaccagaagaacctgaagctccacggctcccggttcccacccagacgcctctgctg
cacaggggaacagacggcgaacagagaaaccgccgcctgctggaggagacgatgagatca
gatgaaagtgacaaagactgcagagaaacggacgaagccgacgctgctgcctctgtgagc
cttcataaaaacggcatggcggacggtgacgagcacgttgtgtccgctggtggagaagtc
tgcaataagagtttttcccctcaagtcgtctggttccagacctgcgactctgtcatcgta
acagtgaagctgatgaacccagaggttcagcagtgcgatttctacaccgacagagtcgtt
tacagtggcagagtgaacggtcgatcctatagggctgacctggagcttcaccagaacata
gccgctgacgcttgccactgggagatgaagtccaatcagcccattcttaaactggtgaaa
caggagccgggatactgggagagactggtcagggggaagaatattttcgtaagttttgac
atggaccatgttgatgaaaaggaagatgagtcatcaggcggactgcggtttgttgaaagc
cctgaagcaggaagctgctacttgagctctgacagcgacagcgactga
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