Cyprinodon tularosa (White Sands pupfish): 119776142
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Entry
119776142 CDS
T07496
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119776142 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctul02000
]
119776142 (abca5)
Transporters [BR:
ctul02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
119776142 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119776142
NCBI-ProteinID:
XP_038130342
LinkDB
All DBs
Position
Unknown
AA seq
1675 aa
AA seq
DB search
MYFIPEGSLTNASRPYVGSMQPVFRRDAGVWTQTKSLLYKNLLIKWRTKQQSLQELLLPL
MLLGLLILISTMNPHVYYEGISTKELEDDNFFRNIRGLGYTPITNITTDIMEEVAARLLN
VQDHLELFTSEEDLENASLYEPSNYIGVVFLDSAATSYRLRFPHHKLPLPSDYTESIASC
YSVLERCRAANYWFSGFTRLQTMIDAAIIQRQTKRTVWDELNLKAVMMGQPGSVEVQKFP
HVLISIYLVLAFTPFVTFLIVNVAAEKEHHLKDTMTMMGLYDTAFWLSWGLLYAALVTAM
SVLMAVIATYSLLFPKSDFLVIFFLIFLYGISSIFFSFMLTPLFKKPKFASTVGSMLTVV
FGCMSLFTVLLPDFPQLLVWLLCLLSPSAFSMGIAQVVYLEAQGDGAVFSSLTNGPHPLY
VPLLMLALDCVLYLLLAIYLDQVLPGEFGIKRSVLYFLKPRYWSKHRKRYVEVSSVFDAE
ANGAPVGDENVEPVSPEFRGKEAIRISNIRKVYKDKEKSMEALRGLTFDIYEGQITALLG
HSGAGKSTLMNILCGICPPTSGSAAIYGSPVADIAEGSEMKQLVGICPQFNIIFDVLTVE
EHLKIFAAIKGIPPADVPAEVTRVLKDLDLEKIMTAQAKSLSGGQKRKLSVGIAILGDPK
ILLLDEPTAGMDPCSRHQVWSLLKSRQAGRVIVLTTHYMDEADILADRKAVISQGQLKCV
GSSLYLKIKCGVGYHLRMSIAEGCDAEKVASLVKQHVPKATLCRQHDAELTFTLPFEGMN
TFPGLFSELDSQPQLGIKNYGVSMTTLEDVFLRLESEAEVDQADYSVFHREPAEDDGDAL
SVDDTDQRLLTFSDSKSDMVSGHALWRQQFSAVAWLHMLNVRREWKAYLYTLVLFLLFFS
AILVVSLVSGNIQIHSQEREFQPIYLLKKNEAPHRYVTSLLVKNSTDSDISDFIHNLESQ
DIKVELMKQTDYMAAAPHSAAVEVSGSSKGFSYSIAFNSTTVHSLPMAANVLSNALLRGL
NGTGQIRTWTKPFDYQIPDITSYALVYIEAIMLGMLAAGMPAYFAMDHTRDREIKCRSTL
RISGLLPSAYWCGQAAVDVPFYYLILSSMNLILFSFHSANLPTTSNLTAAVLCTIGFGPA
MILFTYVVSFGFARVQSNRDFFSFISMMVCVVSASIVQLFFLVELPEMARSLHNVLCLLI
PLYPLMGCLSCITKATFLPILYEENFLWKSLLISVVAPYLQCIVLLFLLRWLEVRYGGRA
MKSDQLCRISSRPKPKPECSSEEGLNEDEDVCMEKARVKEALTCQACEEKPMVVVSNLRK
EFQCQKEGFSLTKKTKVATKNVSFCVGKGEVLGLLGPNGAGKTTVMHMLSGDTDPTAGRI
LMGDYSADFSPLDDPLDHVGYCPQVNPLWPRITLQEHLEIYAAIKGLKGHEVPGIIKRVS
NALELKEHLDKPAKSLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRMWRAMRA
AFRNHQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGTIQHLKAKFGQGYSLEVKLREE
LTGLQQEALLHQEILRIFPHAARQESFTTLMVYKVPMEDVGSLARSFSQLENAKQTFNFE
EYNFSQSTLEQVFLEFAKEQESEEDVVGPLSTTFQWQRLQQDGSTTQADSTVQQL
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctgagggcagcctgacaaacgcgtcccgtccgtacgtcggcagcatg
cagccggtgtttaggagagatgctggagtttggactcaaaccaaaagtcttctctataag
aacctgctgatcaaatggaggaccaagcagcagagccttcaggagctgctcctccccctg
atgctcctcggtctcctcattctcatcagcacaatgaaccctcatgtttattatgaaggc
atcagcaccaaggagctggaggatgacaacttcttccggaacatcagaggcctgggctac
acgcccatcaccaacatcaccaccgacatcatggaggaagtggcggctcgtttactgaat
gtgcaggatcacctggagttgttcaccagcgaggaggatctggagaacgccagcctgtac
gagccgtccaactacatcggcgtggtgttcctggacagcgcagccacatcctacaggctg
cgcttcccacaccacaagctgccgctgcccagcgattatacagagtccatcgccagctgt
tacagcgtcctggagagatgcagagctgcaaactattggttctctggtttcacccgcctc
caaactatgattgatgccgccatcattcagaggcagaccaaacggacggtgtgggatgag
ctgaacctgaaggcggtgatgatgggccagccaggctccgtggaggtccagaagtttccc
cacgtcctgatctccatctacctggtgctggccttcactccttttgtcaccttcctcatt
gtgaacgtggcggctgagaaggagcatcacctgaaggacaccatgaccatgatggggctg
tacgacacggccttctggttatcatggggccttctgtatgctgctttggtgaccgccatg
tccgtcctgatggccgtcatcgccacatacagtttactcttccctaaaagtgacttcttg
gtcatctttttcctcatcttcctctatggcatatcttcaatctttttctccttcatgctg
acgccgttgttcaagaagccaaagtttgcgagcacggtgggctccatgctgacggtggtg
tttggctgcatgtcgctgttcaccgtgctgctgccagacttcccacagctgctggtctgg
ctgctctgcctgctgtctcccagtgccttctccatggggatcgctcaggtggtttacctg
gaagcgcagggagatggcgctgtgttctcctccttgaccaacgggccccatccgctctac
gtccctctgctcatgctagctctggactgcgttctttaccttctgctggccatctacctg
gaccaggttctgcccggtgagtttgggattaagaggtccgtgctctacttcctgaagccg
cgttattggtccaaacacaggaagcgctacgtggaagtgagctccgtgttcgatgctgag
gccaacggcgctccagttggagatgagaacgtggagcccgtctccccggagttcagaggg
aaagaagccatacggatcagcaacatccggaaggtttacaaagacaaggagaaaagcatg
gaggctctgagaggcctgaccttcgatatctatgagggtcagatcacagccctgctggga
cacagcggcgcaggaaagtccactctgatgaacatcctgtgcggtatctgcccccccacc
agcggctcggcggccatatacggctcccccgtggcggacattgcagagggctcagagatg
aagcagctggtgggaatctgccctcagttcaacatcatctttgatgtgctgacggtggag
gagcacctcaagatatttgctgccatcaaagggatcccgcctgctgacgtccccgctgag
gtcaccagagtcctgaaggacttggacttggagaaaatcatgacggctcaggcgaagagt
ctgagcgggggccagaagaggaagctctcagtgggcatcgccatcctgggagatcctaag
attttgctcctggatgaacccactgcagggatggacccctgctccagacaccaggtgtgg
tcgctgctgaagagccggcaggccggcagagtcattgttctcaccacgcactacatggac
gaggccgacatcctggctgatcgtaaagctgtgatctctcaggggcagctgaagtgcgtc
ggctcgtctctgtacctgaagatcaagtgtggcgttggatatcacctcaggatgtccatc
gctgagggctgcgatgcagagaaggtggcgtcgttggtgaagcagcacgttcccaaagcg
acgctctgcaggcagcatgacgctgagctcaccttcacgctgcccttcgagggcatgaac
acctttccaggcctgttctcagagctggactctcagccgcagctggggattaagaactac
ggcgtttccatgacaacgctggaagatgttttcctgcgcctggagtcggaggctgaggtg
gatcaggccgactacagcgtgttccaccgggagccggcggaggacgacggcgacgcgttg
tctgtggacgacaccgaccagcggctgctcaccttctcagacagcaagtcggacatggtg
tcgggtcacgctctgtggaggcagcagttcagcgccgtggcctggctgcacatgctcaac
gtgcggcgggagtggaaggcctacctttacaccctggttctcttcctgctcttcttctct
gcgattctggtcgtgtcgctggtgagcggaaacatccagatccactcacaggagcgggag
tttcagcccatctacctgctgaagaagaacgaggcgcctcacagatacgtcaccagcctc
ctggtcaagaactcgaccgactctgatatttctgacttcatccacaacctggaatcccag
gatatcaaggtggagttgatgaagcagaccgactacatggctgcggcgccgcacagcgcc
gccgtggaggtctccgggtccagtaagggtttcagctacagcatcgctttcaacagcacc
accgttcactcgctgcccatggccgccaacgtcctgagcaacgccctcctcagaggcctg
aacggaaccggccagatccggacctggaccaaaccctttgattatcaaatcccggacatc
acgtcctacgctctggtctacatagaggccatcatgctggggatgctggcggccggaatg
ccggcgtatttcgcaatggatcacacccgggatcgtgagataaagtgccgctcaacgctg
cggatctccggcctgctgccctcggcctactggtgcggccaggcggccgtggacgtcccc
ttctactacctcatcctgtcctccatgaacctcatcctcttctccttccactctgcaaac
ctgcccacaaccagcaacctcacagccgcggtcctctgcaccattggcttcggcccggcc
atgatcctcttcacctacgtggtttccttcgggttcgcacgagttcagagcaacagagac
ttcttctcgttcatctccatgatggtgtgcgtggtgtcggcctccatcgtccagctgttc
tttctggtggaactccctgaaatggccagatcgctgcacaacgtcctgtgcctgttgatc
cccctctaccctctgatgggctgcctcagctgcatcaccaaggcaacgttccttcccatt
ctgtatgaggagaacttcctgtggaaaagtctgctgatttccgttgtggctccctacctg
cagtgcatcgtcctgctgttcctgttgcgctggctggaggtccggtacggagggcgggcg
atgaagagcgaccagctgtgcaggatctcatcgcggccgaagcccaaaccggagtgcagc
tcagaggaagggctcaacgaggatgaggacgtttgcatggagaaggccagagtgaaggag
gcgctaacctgtcaggcctgcgaggagaaaccgatggtggtcgttagtaacctgagaaag
gagttccagtgccagaaagaaggcttctctctcaccaagaagactaaagtggccactaag
aacgtatccttctgtgttggcaaaggggaagttctgggactgctgggccccaacggagca
gggaagaccacggtcatgcacatgctgtcaggcgacacggaccccacggccggccggatc
ctgatgggagactacagcgccgacttcagtccgctggacgatcctctggaccatgtgggc
tactgtccccaggtcaaccctctttggccccggatcaccctgcaggaacacctggagatc
tacgccgccattaaagggctgaagggccacgaggtcccgggcatcatcaaacgagtgtct
aatgcgttggagctgaaggagcatctagataaaccggcaaagagtctctctgcaggactg
aaacggaagctgtgcttcgctctgagcatgatcggaaacccgcagattgtcctgctggac
gagccgtcgtcaggaatggatcccaagtccaagcagcggatgtggagggccatgcgtgct
gcattcaggaaccaccagcgaggagctatcctcaccacacactacatggaggaggctgag
gccgtgtgcgaccgcgttgccatcatggtctccggccagctcagatgcatcggcaccatc
cagcatctgaaggccaaattcggccagggctacagtctggaggtgaagctgagggaggag
ctgacgggactccagcaggaggcgctactgcaccaggagatcctccgaatctttccgcac
gccgcccgacaggagagcttcaccaccctgatggtctataaggtccccatggaggacgtc
ggctcgctggcccggtctttctcccagctggagaacgccaaacaaaccttcaactttgag
gagtacaacttctcccagtccacgctggagcaggtgttcctggagtttgccaaggagcag
gagagcgaggaggatgtggtgggacccctcagcaccaccttccagtggcagcggctgcag
caggacggctccaccacccaggcagacagcacggtgcagcagctctga
DBGET
integrated database retrieval system
