KEGG   Cyprinodon tularosa (White Sands pupfish): 119776164
Entry
119776164         CDS       T07496                                 
Symbol
tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119776164 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ctul03400]
    119776164 (tdp1)
DNA repair and recombination proteins [BR:ctul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     119776164 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 119776164
NCBI-ProteinID: XP_038130371
LinkDB
Position
Unknown
AA seq 609 aa
MSQASLHGRWTVSSSDDDDDEDIPPSGTTAPKPRRSPSPVPEPTPLEVKAEPVRTPVSSS
LTIGSEARQSAARNQLNPVKFENSPSLAGKRKKEASDGSGWALSDSDEDDEVKNDRQVNP
PKQAPPNGERKKAKMESERPPSPHGRLYYIDEPDNFFESSVPCLNDTYRFYLNKVTGLDR
KYNSGALHIRDILSPLFGTLKESVQFNYCFDIPWMVKQFPPEFRHCPVLIVHGDKREAKA
RLLQQGQPFPHVRFCQAKLDIAFGTHHTKMMLLWYEEGFRVVILTSNLIRADWYQKTQGM
WMSPLFPRLPEGSSASSGESPTFFKRDLLEYLASYRAPELEDWIQRIKEHDLSETRVYLV
ASMPGRYVGADMERWGHLRLRKLLHEHTDPIPGEERWPVIGQFSSIGSMGADKTKWLAGE
FQRTLTTLGKSSLRPDPPMYLLYPSVEDVRLSLEGYPAGGSLPYSIQTAQKQIWLHSYFH
RWKAGRTGRSHAMPHIKTYMRVSPDFTQLAWFLVTSANLSKAAWGALEKNNTQIMVRSYE
LGVLYVPSAFNMKTFPVDTNPFPASSPTSGFPVPFDLPPTSYTSKDQPWIWNIPYSQEPD
THGNIWVPS
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgtctcaggccagtctgcatggcaggtggactgtctctagcagcgatgatgatgatgat
gaagacattcctccttcagggactactgcacccaagccccgcaggtctccctctccagta
ccagagccaactcctctggaggtgaaagcagaaccagtcagaacgccagtatcctcctca
ctcactattggctctgaagccagacagtcagcagcgaggaaccagttaaacccagtaaag
tttgaaaacagcccatcgctggctgggaagcggaagaaggaggcctctgatggttccggt
tgggctctctcagacagtgacgaagatgatgaggtgaagaatgacaggcaggttaatccg
ccaaagcaggcgcctccaaacggtgaaagaaaaaaagccaagatggagagcgagcgtccg
ccgagtccccacggccgactgtactacatcgacgagccggacaacttcttcgagtcttct
gttccctgcctgaatgacacctacagattttacctgaacaaagtcacagggctggacagg
aagtacaacagtggagctctgcacatcagagacatcctgtccccgttatttggcacccta
aaagagtccgttcagtttaactattgctttgatattccctggatggtaaagcagttccca
ccagagttcaggcattgtccggttctgatcgtccatggagataaaagggaggccaaagca
cggctgcttcagcagggccagccttttccacatgttcgtttctgccaggctaaactggac
attgcttttgggactcaccacacgaagatgatgctgctgtggtatgaggaaggcttcaga
gtggtcatcctcacctccaacctcatcagagctgactggtaccagaagacccaagggatg
tggatgagccctctgtttccacggttacctgaggggagcagcgcaagttcgggggagtcg
cccaccttctttaagcgggacctgctggagtacctagcatcataccgcgctccagaactg
gaagattggatccagcggatcaaggagcacgacctgtcggagactagagtttatttggtc
gcctcaatgccggggagatacgtgggtgcagacatggagcgctggggccacctgaggctc
cggaagctgttgcatgagcacacggatcctattccaggtgaagaaaggtggcctgtgatt
ggccagttctccagcatcggctccatgggggccgataagaccaaatggctggcaggggaa
tttcagcgcactctgaccacactgggaaagtcctccctccgtccagaccctcccatgtat
ttgctgtacccatcagtggaagatgtgaggctgagtttagagggttaccctgctggaggt
tctcttccctacagcatccagacggctcagaaacagatctggctccactcatacttccac
cgctggaaggcaggccggacaggaaggagtcacgccatgccgcacattaaaacctacatg
agggtttcacctgatttcacccagcttgcctggttcctcgtcacaagtgccaacctgtct
aaggcagcatggggggcactagagaagaacaacactcagataatggtgcggtcatacgag
ctgggggtgctctacgtcccatcagcatttaacatgaagacattccccgttgataccaac
ccgtttcccgcctcctcccctacatccggtttcccggtaccctttgacctcccccctacc
agctacacatcaaaagaccagccgtggatctggaacatcccctacagccaggagccggac
acccacggcaatatctgggttccctcttag

DBGET integrated database retrieval system