Cyprinodon tularosa (White Sands pupfish): 119776399
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Entry
119776399 CDS
T07496
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119776399 (dennd4c)
Membrane trafficking [BR:
ctul04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
119776399 (dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
119776399
NCBI-ProteinID:
XP_038130720
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSAPLEQDLSETKSSGPKAPITDLAVINRSAGETVPEGFT
CIETTYSGQPANLNHGSLKSPELFLCYKRGRGKPPLIDIGVLYEGKDRLIQGCEVIQATP
YGRCANVNNSYANSQRIFITFRRAPPVQPQNSLAVTDICVIISSKGETPPHTFCKVDRNL
NGGMWGSSVFLCYKKSVSASNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTRDPLPVFSTFILTISSGEKVYGSAIQFYEPYSADLLSEKQKIQLGLLTPVEKKTI
PDRSVNTNKCICVLSRWPFFESFRKFLMFIYKLSVSGPNPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYGTLLMNLGAENCATLLHFILLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKKHSNWKYLPKKPCKSLINLLNNLHHQLAIVAVRQTPHEDSAL
DLTPIDADFTWQKKKMSLEMETQEAFLRFMASILKGYRNYLKPITQAPSAKATAADSLYD
LQGFLKSRDRTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KGTKVEGDSSEDTKLLELDESQKSEHTVFVMPPEPPADNGSEPAVWYTYKGFPRLQLSLF
DRPRELRPALSTRAAGASLSSSPALLAKRTKQEIKHAYKLAKRFYSNPPLWARCLFSHCY
SMWFICLPAGVRLAKSKSRAMQQAYNVLLRMKATEVEVLDEVCYRVVMQLCGVWGLPVMA
VRVLVEMKKAGVQPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVVRGVAQFKQVQN
QRSSKKKTPTTTTTAASEESVATDADNLSHGSAHSSSEVNGEEPNEDTVEGCNTGQSDQG
YGSKDELHQELAEASAAGELSTEQRNADKNDLDGGDIAGSVDSAVAVAEPPSPVDVHSPV
PSIVRLSTGSFDGGRETKTGKLFRSLSKTEDVSLPDHSDSMTPVKAAHQSQHQRQKAFSE
RSCSFSAETRAGMLLEKGVDHMASQMGADARILTAALSGAQSPLPHGKSKALFEDVEEEP
GEDKKPSSEQDLGASEETKGEEKQMVAEVRKEKRERRQTESQDDESGVRGATLERADVEA
GADPLSLLVSEKEESASVSSQDPPRSVPTVVSRNLAEEIEMYMSLKSPLGSKSSSMELQK
AQGDSTDGQKPLERRASLPVPPAKSASTSPVDTPKRSPSTVTRSKTFAVKTKTYVSTTES
ATPKSSTLTALVKSSQAASLGSVINTISGIKMDSLLSGAKIDVLKSGMKQAANVGSKMWE
AMQSAFASSDDEDEDPQGAARFPGRLDEHLLSAHDLEESPEKRADPGLVANGLNRSSTSL
GSSSGSSDTGRGTQQTNATTGRVGRGPDSEQNSSHHASSSSIYQNCALEVLMSSCSQCRS
CEALVYDEEIMAGWTADDSNLNTNCPFCRTAFLPLLHIEFHDLRTMPDFYMNPSASGESI
HSSSTQPTAGSLADIKTPDAINFSEEESKENPDCRPAAHKSLIPKPVQSDPLGLLEAAGK
QERPSGTSLTRSNSVGGPLQSLDYSLRPGHGVSTTSLPCSLQEVSDGIGKKRPNPKPVSV
PYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPSHLPGLILTS
EHCNNGVQLPLTSLTQDSKHVFVQLLWDNINLHREPEEPLYLLWRTFLEKKGTLGPTDHQ
EIRTLLNTIVRNIQTNDVYGPINLLLREIKRHPEGVKRQRSIYREILFLSLVALGRENID
IEAFDREYRQAYDQLSPEQLKSLHRMDRPPSPSIQWCLKCFGAPFI
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcatcgtgtgaccgactactttgtggtggcgggcctgaccgac
aagtccgcccccctggagcaggacctgtcagaaaccaaatccagcgggcccaaagcgcct
atcacagacctggctgttattaacaggtcagcgggtgaaacggtccctgagggctttacc
tgtattgagaccacctacagcggccagccggccaacctcaaccatggcagccttaagagt
ccagagctcttcctgtgctacaaaaggggtcgagggaaacctccgctcattgacattgga
gttctctatgagggtaaggaccgtctgatccagggctgcgaggttattcaggccacacct
tatggccgctgtgctaacgtcaacaacagctacgccaactcacagcgtatcttcatcacc
ttccgccgagcccctccggtacagcctcagaattccctggcagtgacggacatctgcgtg
attatctccagtaagggggaaacgccaccgcataccttctgcaaagtggacaggaacctt
aacggtggcatgtggggctccagcgtgttcctgtgctacaagaaatcagtatctgcgtcc
aattctataagctacaaagcaggtttaatctttcgttaccctgaagaggattatgagtct
tttcctctgtcagagtctgttcctctcttctgtttgcccatgggcgccaagatcgaatgc
tgggcaccaaacacccgtgaccctctgccggtcttctccacgtttattctgacaatctca
tctggggaaaaggtatacggttctgccatccagttctacgaaccatactctgctgatctt
ctgagcgagaagcagaagatccaactgggtctgctcacccctgtagagaagaagacgatc
cctgaccgctctgtgaacaccaacaaatgcatctgtgtgctctcccggtggcccttcttt
gagtcgttccgcaagtttctgatgttcatctacaagctctctgtctcaggcccgaaccca
ctgcccattgaaaagcacatctcgcacttcatgcacaacgtgtcgtttccttcccctcaa
agacccagaatccttgtccagctctcggcacatgacactttgatactctctcagcctgtg
tgtactcctttacccctcagcggggcagattacggcaccctgctgatgaatctaggtgct
gaaaactgcgccacactgctgcactttatcctgctggagagcaagatcttgctgcactcg
ctgaggcctgccgtgctcaccggagtggcggaggctgtggtagctatgattttccccttc
cagtggcagtgtccctacatcccgctgtgcccgctctctctggcaggtgtccttaatgcc
ccgtgtccattcattgtgggtgtggactcccgttactttgatctgtacgaccccccacca
gatgttgtctgtgtggacctggacaccaacaccatctatctgtcggatgagaagaaacac
agcaactggaagtacctcccaaagaaaccctgcaagagtctgattaacttgctaaacaac
ttgcaccaccagctggccatagtggcagttcgccaaactccacacgaagactctgctctg
gatctgacccccatcgatgctgacttcacgtggcaaaagaagaagatgtccctggagatg
gagacccaggaagccttccttcgcttcatggcctccatcttgaagggctaccgcaactac
ctcaaacccatcacccaggcaccttctgcgaaggccacagctgcagactccctttatgac
ctgcaaggtttcctgaaaagcagagaccgcacccatcagaagttttactcccagctcaca
aagactcagatatttatccgttttatcgaggagtgcacctttgtgagcgacaaagacaca
ggcctggcctttttcgatgactgtgtggagaagctttttccctctgataaaatcaccgac
aagggtaccaaggtcgaaggagactcatctgaggacaccaagctgctggagctggatgag
tcccagaagagcgagcacacagtatttgtgatgcctccagaacctccagctgacaacgga
tcggaacccgctgtttggtacacctataagggtttccccaggctgcagttgagtctgttt
gatcgacccagagagttgcgtccggcgctgagcaccagagcagcaggggcgagtctatcc
agcagtcctgcgctgctggcgaagagaaccaagcaggagattaagcatgcctacaagctg
gcaaagcgtttctactccaaccctccgctgtgggcgcgctgcctgtttagccactgctac
agcatgtggttcatctgcctgcctgcaggcgtgcggttggccaagtctaagagccgagca
atgcagcaggcgtacaacgtcctgctgaggatgaaggccaccgaggtggaggtgctggat
gaggtctgttacagagtggtgatgcagctctgtggtgtgtggggtctccctgttatggct
gtaagagtcctggtagagatgaaaaaagctggagttcaacccaacgccatcacgtacgga
tactataacaaggcggtcctggagagcccttggcccagtcgaaaccgcagcggcctcttc
atgtggaccaagttgcgtaacgtcgtccgtggggtggcccagttcaagcaagttcaaaat
cagaggtcatcaaagaagaaaacacctacgacaacgaccacagctgcatcagaagagtca
gtagctacagatgctgataatctgagtcatggtagcgctcacagctccagtgaagttaac
ggcgaggagccaaatgaggacacagtagagggctgtaatacagggcagtctgatcaagga
tacgggtctaaggatgagttacaccaggagctggcagaggcctcggctgcaggcgagcta
tccactgagcagagaaatgctgataaaaatgaccttgatgggggcgacattgcgggctca
gtggacagtgccgtagctgtagcagagccgcccagtcctgttgatgtccattcacctgtc
cccagtattgtgaggctctccaccggaagctttgatggcggcagggaaaccaaaacgggg
aagcttttccgaagtctcagtaagactgaggacgtgtctctgcctgatcacagcgactcg
atgacacctgtaaaagcagcccaccagtctcagcatcagcgacagaaagccttctcagag
cgcagctgcagcttcagtgctgaaacccgtgctgggatgctcttggaaaaaggcgtggac
cacatggccagccaaatgggcgcagacgctcgtatacttacagcggcgctatctggagct
cagagtccactgcctcacgggaagtccaaagcactttttgaggatgtagaggaggagcct
ggggaagacaaaaagccttcaagtgagcaggaccttggagcgtctgaggaaacgaaaggg
gaggagaaacagatggttgctgaagttaggaaggagaaacgagagaggaggcagactgaa
tctcaggacgatgagtctggagtccgaggagctacgctggagagggccgacgtggaggca
ggggctgaccctctctccctcctggtgtcagagaaagaggagtcagcttctgttagcagt
caggatccgccgcgctccgtgcctaccgttgtatcccgcaacctggccgaggaaatcgaa
atgtacatgagtctgaagagcccactgggatcaaagtcctccagcatggagctgcagaag
gctcagggggactccaccgacggccaaaagcctctggaacggagggccagccttccggtg
ccacctgccaaaagtgcaagcacttccccagtggacacgcccaaacgcagcccaagcacg
gtcactcgctccaagactttcgcagtaaagacaaaaacctatgttagcaccacggaaagc
gccactcccaaatcctccacactgacggcattggtcaagtcctcgcaggcagcatcgctg
ggatccgtcatcaacaccatttcaggcatcaaaatggactctttgctgtccggagccaaa
atcgacgtgcttaagtcgggcatgaagcaagcagcgaatgtggggagtaaaatgtgggag
gccatgcaatcagcttttgcttcttccgatgatgaggatgaagatcctcagggtgcggcc
cgattccccggacgtctggatgaacacctgctgtctgcacacgatttagaggagagtccc
gagaaaagagccgaccctggtttggtagctaatggtctaaaccggagcagcaccagtctg
ggcagcagcagtggcagcagtgatacgggcagagggacacagcagaccaatgcaactaca
gggcgtgtaggcaggggtccagactctgagcaaaactcttcacatcacgcctcctcctcc
agtatctaccagaactgtgctctggaggtgctgatgtccagctgctcccaatgccgctcc
tgcgaggccctggtgtatgatgaggagataatggcaggctggacagcggatgactccaat
ctgaacacaaactgtccgttttgccgaacagccttccttcccttactgcacatagagttt
catgacctccgcacgatgcccgatttttatatgaatcccagtgcatcaggagaaagcatt
cacagcagcagcacccagcctacagctgggagcttagctgatataaagaccccagatgcc
atcaacttctctgaggaggagtcaaaggagaatccagactgtcgacctgcagctcataag
agcctgattccaaagccagtccaatcagatcctctgggtctcttggaggcagcagggaaa
caggagagacccagtgggacttcactgacacgcagcaacagcgtcggaggccctctgcag
agcctggactactccctaagacccggacacggtgtctccaccaccagcctgccctgcagc
ctgcaggaagtgtcggatggcattggcaaaaaacgtcccaatcccaaaccggtgtctgta
ccgtacctcagccctctggtcctgcgcaaggagctggagaccctgttggagaatgaagga
gaccaggtcatctacacacacaagttcctcagtcagcatcccataattttctggaacctg
gtgtggtatttccgtcgcctggatctcccgtctcacctccctggcctcatcttaacctct
gaacactgcaacaatggagtacagcttcctctgacgtcactgactcaggatagtaagcat
gtcttcgtccagctgctgtgggataacatcaacctgcaccgagagcctgaagaacccctc
tacctcctctggaggaccttcttggagaagaaggggactttgggtccaacagatcaccag
gagatccggaccctcctcaacaccattgttcgaaacatccagaccaacgacgtctatggt
ccgatcaacctgctgctacgggagatcaaacgtcatccagaaggtgttaaacggcagagg
agtatttatagagaaatactgtttctttcactggtggccttggggcgggagaacattgac
atagaggccttcgacagggagtaccggcaggcctacgaccagctgagcccagagcagctc
aagtctctgcaccgcatggaccgcccgcccagccccagcatccagtggtgtctcaaatgt
ttcggagcccccttcatctga
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integrated database retrieval system
