Cyprinodon tularosa (White Sands pupfish): 119776555
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Entry
119776555 CDS
T07496
Symbol
thbs4b
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04145
Phagosome
ctul04510
Focal adhesion
ctul04512
ECM-receptor interaction
ctul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119776555 (thbs4b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119776555 (thbs4b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
119776555 (thbs4b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119776555 (thbs4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119776555 (thbs4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctul04147
]
119776555 (thbs4b)
00536 Glycosaminoglycan binding proteins [BR:
ctul00536
]
119776555 (thbs4b)
Membrane trafficking [BR:
ctul04131
]
Endocytosis
Phagocytosis
Opsonins
119776555 (thbs4b)
Exosome [BR:
ctul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119776555 (thbs4b)
Exosomal proteins of colorectal cancer cells
119776555 (thbs4b)
Exosomal proteins of bladder cancer cells
119776555 (thbs4b)
Glycosaminoglycan binding proteins [BR:
ctul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119776555 (thbs4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
EGF_MSP1_1
cEGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
119776555
NCBI-ProteinID:
XP_038130941
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MNLWTSVFLVLQLLLNLCSHAEAQTLELYDLLTSPDCLPDLLQGGLAEKGVNEAFILTTF
KLQPKTGTTVFGLFNPRDNSKYFEFTVMGKLNRAVLRYLRTDKRMSSVTFNNLVLADGQQ
HRLLFHLKGLQQQEPGRVELHLDCRLVETVRDLPAAFQGLPAGYGMVELRTMQAREQESL
EELKLVVGDSFENVASLQGCYFQQKDSVQTLGVNTKQLSNQMLELTKVVNELKDVLIQQV
KETSFLRNTISECQACGLGGTEVVKPRCAPGVCFRDDMCIETANGVECAPCPDGYTGDGF
NCDDVDECQFNPCFPGVKCVNTAPGFRCDACPLGYIGLPVEGVGILFAQTNKQVCDDIDE
CKGPDNGGCTANSICHNSVGSFYCGSCKSGFTGDQVKGCEPELSCGNSLTNPCDINADCI
RERDGSISCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDTSCRKDNCMFVPNSGQEDAD
RDGQGDACDDDADGDGIPNEQDNCRLKPNVDQRNSDGDSHGDACDNCRMVKNPDQRDTDG
DGKGDACDDDMDGDGIKNFLDNCQRVQNRDQLDRDGDGVGDACDSCPDIPNPNQSDVDND
LVGDSCDTNQDSDGDGHQDTKDNCPLVINSSQLDSDKDGLGDECDDDDDNDGIPDVLPPG
PDNCRLVPNPEQIDDNNDGVGDICESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLD
PEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFI
FGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSRSGPGEHLRNSLWHTGDT
NDQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGTQLVADSGVTIDTTMRGG
RLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSAQHTVDSI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgtggacatctgtctttttggtcctgcagctgctattaaacctgtgctcacat
gctgaggcccagaccttagaactctatgatcttctcacctcccctgattgcttgccagac
ctgctgcaaggaggtttggctgaaaaaggggtgaatgaggctttcatcttgaccaccttt
aagctgcaaccaaagactggaaccactgtgtttggcctgttcaacccgagggacaacagc
aagtattttgagtttactgtaatggggaagctcaaccgagctgtgttacgttacttgcgg
actgacaagagaatgagctcggttacctttaacaacctggtgctggcggatggccagcag
caccggctgttgttccacctgaagggactgcagcagcaggagccaggcagggtggagcta
catctggactgcagattggtagagactgtccgggatcttcctgctgccttccagggttta
ccagcagggtacggtatggtggaactaaggacaatgcaagcaagggagcaggagagctta
gaagaactgaaactggtggttggggactcgtttgaaaacgttgcatcattacaaggatgt
tattttcagcaaaaagactcagttcaaactttaggggtcaacacaaagcagttgtccaat
caaatgttggagctaacaaaggtggtaaatgagctgaaggacgtgctcattcagcaggtt
aaggaaacatcttttctgcgaaacacgatatcagaatgtcaggcttgtggtctgggtgga
acagaggtggtgaaaccaagatgtgcgcctggtgtctgtttccgtgatgatatgtgtatt
gagacagcaaatggtgttgagtgtgcaccctgcccagacggatacactggagacggcttt
aactgtgatgatgttgatgagtgccagtttaacccctgcttccccggagtgaagtgtgtt
aacaccgcccctggcttccgctgtgatgcctgccccctgggctacatcggtctgccggtg
gagggggtgggcattttatttgctcaaaccaacaaacaggtctgcgatgacattgatgaa
tgcaaaggacctgacaatggtggctgcactgcaaactccatctgtcacaactctgtgggc
tccttttactgtggcagctgtaagtcaggattcacaggagatcaggtgaagggctgtgaa
ccagagctcagctgtggaaacagcctgaccaacccctgcgatatcaatgccgactgcatt
cgagaaagagacggatccatttcgtgtcagtgtggaattggctgggctggcaatggatac
ctgtgtgggaaagacaccgacattgatggatacccagatgaaaaactcaagtgcaaggac
acaagctgtagaaaggataactgcatgtttgttcctaactctggtcaagaggatgctgac
agggatggccagggagatgcctgcgatgatgatgcagatggagatggtattccaaatgag
caggacaactgccgactgaagcccaacgtggaccagaggaacagtgatggagacagtcat
ggtgatgcctgtgacaactgtcggatggtgaaaaacccagaccagagggacactgacggt
gacggcaaaggagacgcctgtgacgatgacatggatggagatggtataaagaactttctg
gacaactgccagcgtgtccagaacagagaccagctggaccgggatggagacggagtggga
gatgcttgtgacagctgccctgatatccccaacccaaaccagtctgacgttgataatgac
ctcgttggggattcatgtgacacgaaccaagacagtgatggtgatggtcaccaagacacc
aaggacaattgtccactagtgattaacagctcccagctggatagtgacaaagatgggctg
ggagacgaatgtgacgatgatgatgacaatgatgggatcccggatgttttaccgcctggc
ccagacaactgtaggcttgtgcctaaccctgagcaaatcgatgacaacaatgatggggtt
ggcgatatctgtgagtctgactttgaccaggacaaagttattgaccggattgataactgc
cctgagaacgcagaggtcaccctgacagacttcagggcctaccaaactgtggtgctggac
cctgagggagacgcccagattgaccccaactgggttgttctcaaccagggaatggaaata
gttcagaccatgaatagtgaccccggacttgctgttggatacactgcttttagtggagtt
gactttgaggggacgtttcacgtgaacactgtgaccgatgatgactatgccggcttcatc
tttggctaccaggactcgtcgtctttctatgtagtgatgtggaagcagaccgaacaaact
tactggcaggcaactccttttagggctgtggctgaacccgggatccagctcaaggctgta
aagtccaggtctgggcctggagaacatttgagaaactcactgtggcacacaggagacacc
aatgatcaggtgcgtctgctgtggaaggacccgaggaacgtcggctggaaagataaggtt
tcctaccgctggtacttgcagcaccgtccacaggtcggctacatcagagtgcggttctat
gagggaactcagctggttgcagattccggtgtgaccatcgacacaaccatgagaggaggg
cgacttggcgtgttctgtttctcacaagaaaacatcatctggtccaatctgaaatatcgc
tgcaacgataccatcccagaggatttccaagagttcagcgctcagcacaccgttgactca
atctaa
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