Cyprinodon tularosa (White Sands pupfish): 119776658
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Entry
119776658 CDS
T07496
Symbol
smarcc2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119776658 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119776658 (smarcc2)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119776658 (smarcc2)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119776658 (smarcc2)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119776658 (smarcc2)
PBAF complex
119776658 (smarcc2)
GBAF(ncBAF) complex
119776658 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
119776658
NCBI-ProteinID:
XP_038131138
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKTSSSHIVVP
IPTSLEEEEWVRPVMKREKQVLLHWGYFPDSYDTWIQASEIEAAVEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGHREEEQEELSKDQDEASPVPASEEGNTAKTN
NTKKDSESTPVKGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKSSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQVFKYSHRTXAARRWQMLSFILASFIETPQTPATQPIMSFPDKVKDKPTDLQNF
GLRTDMYSKKTGSAKSKTEASSMREWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDEC
ILHFLRLPIEDPYLEDSSSTLGPLAYQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKS
ALEEFSRMKEEVPAALVEAHVRRVEEAARVSGRQDPLYGLEGSGIAGTGLEEGERPDESS
DESKSDTQSSEEKRDAKESKDGAVEEEEKQVENGKKEEERGREAEGEREADKTEPEMGDG
DKEKDAKEGTEEGQREGEIEGERKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYA
EMRARQQHFQQIQHQQHSQPGGPHSNQATSAPPPQGPSASQPAPSTPAPQAAPSPAPPAS
SAPPPESQPSAATHTPSPCPPGQGPTPHSSSSTTPVHHEPSAPHQGESLHPSAPVPASQ
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggcccgaatgtaaaatatttcgaagcgtctgacacc
gtttcccagtttgataatgtccgcgtttggctgggaaagaattataaaaagtatatacag
gctgagccccccaccaataaatcgttgtccagcctggtggtccagctgctccaatttcag
gaggaggtttttgggagacatgttagcaaccctcccctcacaaaattgccgatgaagtgt
tttctagactttaagtctggaggggctctatgtcacattttggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccttcgaggatggatcggaat
gtggagatgttcatgacgattgagaagtccttagtgcagaacaactgtttgactcggcct
gttatctacctgagttctgacatagaaccaaagctgctcggcaaactgaaagacattatc
aaaaggcatcagggctcagtgactgaggacaaaacttccagctcccatattgtggtgcct
attcctaccagcctggaggaagaggagtgggtgcgtcctgtgatgaagagagaaaagcag
gttctgctccactggggatattttccagacagttatgacacctggatccaagccagtgag
attgaggctgcagtggaggatcctcccagcccagaaaaacccagaaaggttcatgcaaag
tggattttagaccttgatcagtataatgagtggatgaatgaggaggactatgaggtggga
gagggctgtcccaaaaggaagaggatctctgccaaaacacttacggatgaggtgaccaca
cctgatgagcggagggataagaaacctggcagtgccaagaaaagaaagcgatcgccttca
ccttcaccaacccctccgcctcaggagagcaagaaaaaaaataccaaaaaagggccaacg
actccgtacaccaagtctaaacggggtcatagggaggaggaacaggaggagctgtccaag
gaccaagacgaagcctcacctgttcctgcgtctgaggagggaaacacagcaaaaacgaat
aacaccaagaaggactctgaatcaactccagttaaaggaggaactgatatggatgaacaa
gaagatgagtccatggagacaacggggaaggaggaggaggagggctctcccagtgtaaag
ggtgaaccagtgaagagttcagaccttcacgaggacaatgtgaccgagcaaacccaccac
atcatcataccgagctacgctgcttggtttgactacaacagtgttcatgccattgagcgg
agagccctgcctgagttcttcaatggaaagaacaaatcgaaaacccctgagatttatctg
gcatacaggaacttcatgatcgacacctatcgactaaaccctcaggagtacctgacctcc
actgcctgccgcagaaacctggctggagatgtgtgcgccatcatgagagttcatgctttt
cttgagcagtgggggctgattaactaccaggtggactcagaaagccggcccacacccatg
ggacccccaccaacctctcactttcacgtccttgcagacactccttcaagtctggtgccc
ctgcagcccaagacatcccaggtttttaaatactcacatagaacanntgcagcaagaagg
tggcagatgttatctttcattttggcttctttcattgaaaccccccagacgccagccacc
cagccgataatgtcgttcccggacaaggtgaaggataagcccacagatttgcaaaacttt
gggctgcggaccgacatgtacagcaagaagactggatcagcaaagagcaagactgaagca
agctctatgagggagtggacagagcaggaaacgctactactactggaggggctggagatg
tacaaggatgactggaacaaggtgtctgaacacgtaggcagccgaacacaagatgagtgc
atcctgcatttcctgcggctgccaattgaggacccatacttggaggacagctcctccact
ctgggcccactggcctaccagccagttcctttcagccaagcaggaaaccccgtcatgagc
actgtggccttccttgcttcggtagtcgacccccgtgtggcctcagctgctgccaaatct
gctcttgaggaattttcccgtatgaaagaggaggtccctgcagcgcttgttgaggctcac
gttcgccgagttgaagaagcagcgagagtcagtggtcgacaggatcccctgtacggcctg
gagggaagcggcattgcaggcactggcttagaggagggagaacggcctgatgaaagcagc
gatgaaagtaagagtgacacccaatcgagtgaggaaaaaagagatgccaaggagagcaaa
gatggagcagtagaagaggaggagaagcaggtggagaatggaaagaaagaagaagaaaga
ggaagagaagctgaaggcgagagggaggcagataaaacagagcctgaaatgggtgatggt
gataaggagaaggatgctaaagagggaacagaggagggacaaagagaaggggagattgaa
ggagaaaggaaggctaaggtagagcgtgatgtgggagagggaaacctggcaactgctgct
gcctccgctttagcagctgctgcggtcaaagccaagcatctagctgcagtagaagagagg
aaaatcaaatctttggtggctctgctggtggagacccagatgaagaagcttgagattaaa
ctgcgacactttgaggaactggaaaccatcatggacagagaaagggaggctctggaatac
cagcggcagcagctgctggctgaccgtcagtccttccacatggagcagctgaaatacgct
gagatgagggctcgccagcagcactttcagcagattcagcaccagcagcacagccagcct
ggaggccctcactccaaccaggcaacctcagccccgccaccccaaggcccgagtgccagc
cagcctgctcccagcacaccagctccacaggcagctcctagtcctgcaccaccagcttct
tccgctccgcctcctgagtctcaaccctctgcagccactcacacaccatctccctgcccg
cctggccagggtccaacccctcactccagctccagcactacacccgtacaccacgagccc
agcgctcctcaccaaggtgagtcactccacccgtcagctcctgttcctgcgtcacagtga
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integrated database retrieval system
