Cyprinodon tularosa (White Sands pupfish): 119776810
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Entry
119776810 CDS
T07496
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119776810 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctul03041
]
119776810 (puf60a)
Spliceosome [BR:
ctul03041
]
Complex A
U2 snRNP components
U2 related factors
119776810 (puf60a)
Complex B
119776810 (puf60a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
119776810
NCBI-ProteinID:
XP_038131356
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MAAAVTAGGPSLIMENGQTALSTPTPNATTTSTTKLGLPPLTPNQQEALQKAKKYAMEQS
IKSVLVKQTLVQQQQLTSLQMAPLTMGLGDALSPLQSVAAQRQRALAIMCRVYVGSIYYE
LGEDTIRQAFVPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVVLGGRN
IKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHPDLSDEDIKSVFEAFGRIKSCMLAR
EPTTGRHKGYGFIEFDKPQSAQDAVASMNLFDLGGQYLRVGKAVTPPMALLTPTTPGGLP
AAAAVAAAAANAKITAQDPVGASLLGPLAGPALLSQQLGLPQAVMAAQAPGVITGVTPAR
PGLPQVGLVNPVLATPPSVTASLGIELKKKEEQQQEAQQDGASEPLSEQEHMSISGSSAR
HMVMRKLLRKQESTVMVLRNMVGPDDIDDDLEGEVTEECGKFGVVKRVIIYQERQGEEDD
AEVIVKIFVEFSEAVEMNRAIQALNNRWFGGRKVVAEVYDQERFDNGDLSA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcggttactgcgggagggccgtctctcatcatggagaacggacagaccgct
ctctccacccccacccccaatgctacaaccacgtccaccactaagctggggcttcctcca
ctgactcccaaccagcaggaggcgctgcagaaggccaagaagtatgcaatggagcagagc
atcaagagtgttctggtaaaacagacgcttgtgcagcagcagcagctcaccagcttacag
atggctcctctgaccatgggtttaggagatgctctgtctcctctgcagtcggtagctgct
cagcgccagagagccttggccatcatgtgtcgggtttacgtgggttcaatctactacgag
ctgggtgaggacaccatcagacaggctttcgtcccctttggaccaatcaaaagcattgac
atgtcctgggactccgtcaccatgaagcacaagggttttgcctttgtggagtatgaagta
cctgaagcggctcagctggcgctggaacagatgaactctgtggtccttggagggaggaac
atcaaggttgggaggcccagtaacattggccaggctcagccaatcattgaccagctggcg
gaggaagctcgtgccttcaacaggatctatgtggcttcggtgcacccggacctctcggac
gaagacatcaagagtgtcttcgaggcctttgggaggatcaagtcatgcatgttggcccgc
gagccgaccacaggacgccacaaaggctatggctttattgagtttgacaaacctcagtca
gcccaggacgctgtggcctccatgaacctgtttgacctggggggtcagtatctgcgggtg
gggaaagctgtgactccacccatggctctcctcacgccgacgactcctggaggactccca
gcagcagcggccgtggctgctgctgccgctaacgcaaagatcacagctcaggatccagtt
ggagcctctctcctggggcccctggctggaccggcccttctctctcagcagctgggcctc
cctcaggccgtcatggctgcccaggccccaggcgtcatcacaggtgtaaccccggcgcgg
cctggtctgcctcaggtggggctagtgaacccggtgttggccacacccccttcagtgacg
gcgtctctgggcatcgagctgaagaagaaggaggagcagcagcaggaggcgcagcaggac
ggtgcctctgagccgctaagtgaacaggagcacatgagcatcagcggcagcagcgcacgt
cacatggtgatgaggaagctgctccggaagcaggagtccaccgtcatggtcctcaggaac
atggtgggccccgacgacattgacgacgacctggagggtgaggtgacagaggagtgcggg
aagttcggcgtggtgaagcgggtcatcatctaccaggagcgtcagggggaggaggacgac
gccgaggtcatcgttaagatcttcgtggagttctctgaggcggttgagatgaaccgcgcc
atccaggccctgaacaatcgctggtttggggggcggaaggtggtggctgaggtctacgac
caggaacgctttgataacggtgacctttcagcgtag
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