Cyprinodon tularosa (White Sands pupfish): 119776822
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Entry
119776822 CDS
T07496
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119776822 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ctul03310
]
119776822 (rorca)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119776822 (rorca)
Nuclear receptors [BR:
ctul03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
119776822 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119776822
NCBI-ProteinID:
XP_038131367
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All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQESSGVGAREEHGDLAD
HGRTYRRGSSATLSDLDDITTLPEGLLFDLPLTPEDAGGDYCNLEMLGGSAGSSSSSQSS
PEQSSLDFVDGNHSIKHEYQLLHDSGLFSHAILNPLPQGCSLLEIERIIQSVVKSHVETS
QYSTEELKRMAWNIYNPEETRSYQTKSAEVMWQQCAVQITNAIQYVVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTMLFDGKFASAQLFKALGCDDLVNAVFDLAK
TLSRIQMSEDEMALFSAAVLLSPDRPWLTDVQKIHKLQEKVYVGLQRCLQKEGASEEKLA
KMVSKLPMMRSICNLHVDKLEFFRLVHPETAYAFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtgattccctgtaaaatctgcggggacaaatcatcaggcatt
cactatggtgttatcacctgcgaaggctgcaagggtttctttcgacgtagccagcaaaac
aacgccatgtattcctgttcaagacaaagaaactgcctgattgaccggaccaaccgtaac
cgctgtcagcactgccggctgcagaagtgtctcgctcttggcatgagtcgcgatgctgtg
aaatttggtcgcatgtccaaaaagcaacgggacagcctgtatgcagaggtccagaaacac
cagcagtcacaagagagctcgggggttggtgcccgagaagagcatggcgacctggcagac
catggccgcacctacagaagaggctccagtgctactctgagcgacttggatgacatcaca
accctgccggagggtctgctttttgacctgccgctgaccccggaggacgcaggtggagat
tactgcaacctggaaatgcttggaggaagcgcagggagcagctcgtcctctcagagctct
ccagagcagagcagcttggactttgttgatggcaaccacagcatcaaacatgagtaccaa
ctgttacatgattcaggactcttctctcatgccatcctcaaccctctgccacagggctgc
tccctgctggaaatagagcgtataatccagagtgtggtgaagtcccatgttgaaacaagc
cagtacagcacagaagagctgaagagaatggcgtggaacatctataacccagaagagaca
cgctcataccagactaagtcagctgaagtgatgtggcagcaatgcgcggttcaaattacc
aacgcaatccagtatgtggtggagtttgcaaagcgcatctctggcttcatggacctctgt
cagaatgatcagattattctccttaaagcaggctgcatggatgttctcctgatccgtatg
tgccgagcctacaaccccatcaataatacaatgctctttgatggaaagtttgcaagtgct
cagctttttaaagctctgggctgtgatgaccttgtgaatgctgtgtttgacttagcgaaa
actctgagtcgtatccagatgtcagaggatgagatggctctgttcagcgccgctgtcctg
ctgtcaccagaccgaccttggctcacagatgtccagaagatccataaactgcaggaaaaa
gtttatgtgggtctgcagcgttgcttgcaaaaagaaggagcatctgaggagaagctagcc
aagatggtgtcgaaacttcccatgatgaggtcgatatgtaacctccacgtagataagctg
gagtttttccgcctggttcatcctgagacagcgtatgctttccctcctttgtacagggaa
gtttttgggagtgaaataaccttcccggactccaccgagggctag
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