KEGG   Cyprinodon tularosa (White Sands pupfish): 119777983
Entry
119777983         CDS       T07496                                 
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04140  Autophagy - animal
ctul04142  Lysosome biogenesis
ctul04148  Efferocytosis
ctul05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    119777983 (vps11)
   04140 Autophagy - animal
    119777983 (vps11)
   04148 Efferocytosis
    119777983 (vps11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    119777983 (vps11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ctul04131]
    119777983 (vps11)
Membrane trafficking [BR:ctul04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    119777983 (vps11)
   Hops complex
    119777983 (vps11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd Clathrin TPR_Vps41 zf-C3HC4_2 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st zf-rbx1 zf-C3H2C3 zf-RING_2 Beta-prop_IFT122_1st zf-C3HC4 zf-RING_5 zf-ANAPC11 TPR_GEMI5 Beta-prop_VPS8 WD40_Prp19 CC_Bre1 Kbp-5 zf_RING_Vps8_fungal Beta-prop_EML_2 zf-RING-like Rab11-FIP3
Other DBs
NCBI-GeneID: 119777983
NCBI-ProteinID: XP_038132917
LinkDB
Position
Unknown
AA seq 918 aa
MAAFLQWRKFVFFDKDAVKDPTDGGKLLLLPKGISASDSGRGHIVLGDMEGQIWLLPRSL
QLTSFQAYKLRVTHLFQLKQHSILVSVGQDEQGINPLVKVWNLDKRDSGNPLCTRIFPAV
PSNKPAEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGGCPVTGLAFR
QMAKVTHLFVATLEKVFCYTLSIKEYPRVELDTHGCALRCSSLADPSQDSQFIVAGDDCV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLNRDLKSPSKSGFGSGGGESSPSEKQVLTI
YDLDNKFIAYSASFDDVIDVLAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMA
INLAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRI
HNLTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLR
QAGYHSHAVFLAERHQHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQTESNMKRYGKTLMH
HVPEGTTALLKRLCTNYQPTGDCVEKANSEEFIPIFANNPRELKAFLEHMIEVDPRSSQG
VYDTLLELRLQDWAHEKDPKEKAVRQGEALSLLRSDNTVFDKALVLCQMHNFKEGVLYLY
EKGQLYQQIMHYHMQNEEYGKVVDACKRYGEQEGCLWEQALGYFARKEEDCKAYISEVLD
HIDQKNLMPPLLVVQTLAHNSTATLSVIKDYLINELQRESQQIEDDERKISQYREETAHL
RSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESDAECPTCTPE
NRKVMDLLRAQDQKRDLHEHFSRQLRSSNDGFSVVADYFGRGVFNKLTLVTDPPGSKAVG
SLEVSLQRDLLIHTKRNS
NT seq 2757 nt   +upstreamnt  +downstreamnt
atggctgcgtttctacagtggaggaagtttgttttcttcgataaggacgcggtgaaggat
cccacagatggagggaaacttctgcttcttcccaaaggaatttcagccagcgactccggc
cgcggccatattgttttgggagatatggaaggccagatctggctgctgccgcgctccctg
cagctcacgtctttccaggcgtacaagctgcgggtcactcacctgttccagctgaagcag
cacagcatcctggtgtcggtggggcaggatgaacaaggcatcaaccctctggtgaaggtc
tggaacctggacaagagagacagtgggaacccgctgtgcaccaggatcttccctgcagtt
cccagtaacaaaccagcagaggtgtcctgccttagtgtccatgagaacctgaacttcatg
gctattggcttcacggacggcagcgtggttctgaccaaaggggacatcaccagagaccgc
cacagtaaaacgctgaccctgcacgagggcggctgccccgtcacgggcctggccttccgc
caaatggccaaagtgacgcacctgtttgtggcgactctggagaaagtcttttgctacact
ctgtccatcaaggagtatcccagggtggagctggacacccacggctgcgccctgcgctgc
tcctctctggccgatccgtcccaggactcccagttcattgttgccggggacgactgcgtg
tacctgtaccagcctgatgagcgggggccatgtttcgccttcgatggccacaagctgctg
gcccactggcatcggggctacctgttcctcctcaacagagacctgaagtcacccagcaag
tcagggttcggcagcggcggcggcgagagctcgccgtcagagaagcaggttttaaccatc
tatgacctggacaacaaattcatcgcctacagtgcctcgttcgacgatgtcatcgatgtg
ttggccgagtggggctccttctacattctgacccgagacggaaaaatgtttgttcttcag
gagaaagacacgcagaccaaactggagatgctgttcaagaagaacctgtttgtcatggcc
atcaacctggctaagagtcagcacctggacagcgacgggctgtcagagatcttccgacag
tacggtgaccacctgtacctgaagggagaccacgatggcgccatccagcagtacattaga
accatcgggaagctggagccttcgtacgtcatcaggaaattcctggacgcccagaggatc
cacaacctgacagcgtacctgcaggccctccaccgccagtccctggccaacgctgaccac
accaccctgctgctcaactgctacaccaagctgaaggacagctccaagctggaggagttc
atcaagagcagtgagagtgaggtccacttcgacgtggagatcgccatcaaggttctccgt
caggccgggtaccacagtcacgccgtgttcctggctgagcgccatcagcaccatgagtgg
tacctgaagatccagctggaggacctgaagaactatcaggagggtctgcgctacatcggc
cgcctgcctttcgaacagaccgagagcaacatgaagcgctatggaaagacgctcatgcac
cacgttcctgaaggcaccactgcactgctgaagcgcctgtgcaccaactaccagcccact
ggagactgtgtggagaaggcaaattctgaagaatttatccccatttttgccaataatcct
cgagagttgaaagccttcctggagcacatgatcgaggtggacccgcgctcatcgcagggc
gtttacgacacgctgctggagctccgcctgcaggactgggcacacgaaaaagacccaaag
gagaaagcggtgcggcagggagaggcgctgtcgctgctccggagcgacaacactgtgttc
gataaggccttggtgctctgccagatgcacaactttaaagaaggagtcctctacctgtac
gagaaaggccagctgtaccagcagatcatgcactaccacatgcagaacgaggagtacggg
aaggtggtggacgcctgtaagcgctacggagagcaggagggctgcctctgggagcaggct
ctgggatactttgccaggaaggaggaggactgtaaggcctacatcagcgaggtcctcgat
cacattgaccagaagaacctgatgcctccattactggtcgtgcagacgcttgcccacaac
tccacggccaccctgtctgtgatcaaagactacctcatcaatgagctgcagagagagagc
cagcagatcgaagacgacgagcggaagatcagccagtaccgcgaggaaaccgctcacctt
cgctctgaaatccaggagctgaagaccagtgccaagatattccagaagaccaagtgcaac
atgtgcaacagccccctggagctcccgtctgtccacttcctgtgcagccattccttccac
cagcactgctttgagagttacgccgagagtgacgcagagtgtccaacatgcactccagaa
aaccgcaaagtcatggatttgctgcgcgctcaggaccagaagcgggatcttcatgagcac
ttcagtagacagctgcggagctccaatgacggtttctctgtggtggctgattactttggt
cgaggagtgttcaacaagctgacgctggtcaccgaccctccagggagcaaagctgtgggg
agtctggaggtcagcctgcagcgagacctgctgatccacaccaagaggaacagctga

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