Cyprinodon tularosa (White Sands pupfish): 119778141
Help
Entry
119778141 CDS
T07496
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119778141 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119778141 (polb)
Enzymes [BR:
ctul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119778141 (polb)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
119778141 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
119778141 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
DUF4806
Cdd1
Motif
Other DBs
NCBI-GeneID:
119778141
NCBI-ProteinID:
XP_038133172
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTIAKYPNKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEEGVK
TLDDLKKVEHKLNHHQKIGLKYFEEFEKRIPRAEMEKMETLILKELKKIDPEYIGTICGS
YRRGAASSGDIDILLTHPNYTSQTEKQPKLLHAVVDHLESIEFVTDTLSKGDTKFMGVCQ
LQGNEDDDEEEEEHLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEY
TIRPLGVTGIAGEPLLVDSERDIFDYIQYRYREPKDRSE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagcaccacaggagtccctaaatgagggaataacagactttcttgtt
gagctggccaactacgagaaaaatgtcaacagagcaatacacaagtacaatgcatacagg
aaagcagcatccaccattgcaaagtatcctaacaagattaaaagtggagaagaagccaag
aaactggatggagttggtgctaaaatagctgaaaagattgatgagttcttgcagactggc
aaactacgaaaactggaaaagatccgaaatgatgacaccagctcctccataaatttcctc
actagagtcactggaattgggcctgctgctgccagaaagttttttgaagaaggggtcaag
acattggatgatttgaagaaggtagagcacaaattaaatcatcaccaaaagattggactc
aagtactttgaagaatttgagaaaaggatcccaagagctgaaatggaaaagatggagact
cttattctgaaggaattgaagaaaattgatccagaatatatcggaacaatttgtggaagt
tatagaagaggtgctgcatcgagtggtgatattgatattttgctgactcatccgaattac
acttctcaaacagagaagcagcctaagcttcttcatgctgtggtcgatcatttggagtcc
attgagtttgtgaccgacactctgtccaaaggagacaccaagttcatgggagtctgccag
ctgcagggaaatgaagatgatgatgaggaagaggaagaacatcttcacaggcgcattgat
attaggttaattcctaaggatcagtactactgtggagttctgtatttcactggaagtgac
atctttaataagaacatgaggactcatgcgctggagaagggcttcactctgaatgagtat
accatcagaccacttggtgtcactggtattgcaggagagcctttgttggtggatagtgag
agagacatctttgattacatccagtacagatacagggaacccaaggatcgcagcgagtga
DBGET
integrated database retrieval system
