Cyprinodon tularosa (White Sands pupfish): 119778146
Help
Entry
119778146 CDS
T07496
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04142
Lysosome
ctul04144
Endocytosis
ctul05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119778146 (cltcl1)
04142 Lysosome
119778146 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119778146 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctul04131
]
119778146 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctul04147
]
119778146 (cltcl1)
Membrane trafficking [BR:
ctul04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
119778146 (cltcl1)
Exosome [BR:
ctul04147
]
Exosomal proteins
Proteins found in most exosomes
119778146 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
RMC1_N
LVIVD
RtcR
Motif
Other DBs
NCBI-GeneID:
119778146
NCBI-ProteinID:
XP_038133189
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKYICIREKVGDQNQVVIVDMSDPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTTTEEVLFWKWISVNTV
ALVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLVG
AEELFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VDDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDAERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVDEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAVVGRYCEKRDPHMACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWAKV
LEENNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLHRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYDEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVITMM
NHATDAWKEGLFKDIIAKVANVELYYKALSFYLEYKPLLINDLLTILSPRLDHNRAVSFF
SKMNQLKLVKPYLRSVQNHNNKAVNEALNNLLTEEEDYQSLRASIDAYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKRNNRWRQSVELCKKDKLYKDAMLFAAESKDAELAETLLQWFLE
EDRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVTV
DKLEEAESHRKTEDDVKEPQQMVFGQQLMLPAAASPVAPQPAYPAYGYPAPNSATPAAAG
YPAQPPYGYNM
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatattaccgatacgattccaggagcacctccagttgcagaacctgggtgtg
aacccagccaacattggcttcagctatctgaccatggagtcagacaagtacatctgcatc
agagagaaggttggtgatcagaaccaggtggtgatagtggacatgtctgaccccaacaac
ccgataagaaggcccatctctgcagacagcgccatcatgaacccagcaagcaaggttatt
gcattaaaagacgctgccaaaacactgcagatcttcaacatagagatgaagagtaagatg
aaggctcacaccacgacagaggaggttctgttctggaagtggatatctgtgaacaccgta
gctttggtgacggacacggcggtctaccactggagcatggagggggattcccagccgacc
aaagtgtttgatcgtcatgccagcctggctggatgtcagattatcaactacagaactgat
gagcaacagaaatggttactgctgattgggatttctgcacagcaaaaccgtgtggttggg
gcaatgcagctgtattcggttgacaggaaagtgtctcagcccatcgaaggccatgctgct
gccttcggggagttcaaagtggagggaaatgccaaaccttccacattgttctgctttgct
gtgcgttcacaggcaggaggaaagttgcatatcattgaagttggtcagccagctgcagga
aatcagccatttgctaagaaagcagtggatgtgtttttcccacctgaggcccagactgac
tttcctgtagctatgcagattgggaacaaacatggcgtcatatatttgatcacaaaatac
ggttacattcatctgtatgacctggagtctggagtgtgtatatacatgaaccgcatcagt
gcagagaccatctttgttactgcccctcatgaggccacctcagggatcatcggcgttaat
aagaagggacaggtcttgtcagtgtgtgttgaagaagaaaatatagtcaactatgccacg
aacgttctgcagaaccctgatctcgccctgaggatggctgtgaggtctaatcttgttgga
gctgaggagctatttgcccgaaagttcaacactctttttgcccagggaagttactcggag
gctgcaaaggttgccgcatctgcacccaagggtatcctccgaacagcagaaaccatacgg
aagttccagagtgtcccagcccagccgggtcaggcctctccgcttctccagtattttggt
attcttttggatcagggccagctcaacaagtttgagtctctggagctgtgcaggcctgtc
ctgcaacagggccgcaagcagctcctggagaaatggctcaaggaggacaagctggagtgc
tctgaagaacttggtgacctggtaaaggcttcggacccaacacttgctctcagtgtttat
ctccgagcaaatgtccccaacaaagtcattcagtgctttgcagagacaggacagttccag
aagatagtgttatatgctaagaaggtggggtacacccctgattgggtgtttttgttaagg
aatgtaatgcgagtaaatccggaccagggactacagtttgcccagatgctcgttcaagat
gaggagccactggccaacatcaatcagattgttgatgttttcatggagggcagcctaatt
cagcagtgcacatcctttctgttagatgctttgaagaacaaccgcccagctgaaggacac
ttacaaacacgtctccttgagatgaacctgattcacgctccacaggtagcagatgcgatc
ctggggaaccagatgttcacccactatgatcgggcccatgtcgctcagctgtgtgagaag
gcaggacttctgcagagagcacttgaacactacaccgacctgtacgatatcaaacgagct
gtggtgcacacacatctgctcaaccctgagtggctggtaaactttttcggctccttgtct
gtggatgactctttggagtgtttaagggccatgctgtctgctaacataaggcagaacctg
cagctgtgcgtgcaggtagcatcaaagtatcatgagcagctgggaacccaggcgctagtc
gagctctttgagtccttcaaaagttatgaaggtttgttttacttcctgggctccattgtc
aatttcagccaggagcctgatgttcactttaaatacatccaggctgcttgtaagactggt
caaattaaagaggtggagcgaatttgtagagagagcaactgctacgacgcagagagggtt
aaaaatttcctgaaggaggccaagttaacagaccagcttcccctcatcattgtgtgcgat
cgctttgactttgtccatgatctggtgctctatctttaccgcaacaatttgcagaaatac
attgaaatctatgttcagaaggtgaatcctagtcggttgccagtggtgatcggtggtttg
ttggatgtagattgttctgaggacgtcatcaagaacctgatcatggtggtcagaggacag
ttttccacagatgagctggtggatgaggtggaaaagaggaacaggttgaagcttctgctg
ccatggctggagtcacgcattcatgaaggctgtgaggagccggctacccataatgcattg
gccaagatctacatcgacagtaacaacacaccggagcgctttctgaaggagaacccattc
tatgacagcgccgtggtcgggcggtactgtgagaaaagagacccccacatggcctgtgtg
gcttatgagagggggcagtgtgacctggagctcatcaaagtgtgcaatgagaattcatta
tttaagagtgaagctcgatatctggtacgacggaaagatcctgaactttgggctaaagtg
ttggaggaaaacaacccttacagaaggcagctcatcgatcaggtggtgcagacagctctg
tccgagacccaggatccagaggaggtgtcagtcacagtcaaggccttcatgactgcagac
ctgccaaacgagctaattgagctgctggagaagattgttctggataactctgtcttcagt
gagcacaggaacctccagaatctgctgattttaacagctatcaaagctgaccgcactcgt
gtgatggagtacatcaacaggctagataactacgacgctcctgatatcgctaacatcgct
attagcaatgagctctttgaagaagcgtttgctatttttaagaagtttgatgtgaacacc
tcagccattcaggttttgatcgagcatatagggaacttggatcgagcctacgagtttgcc
gaacgctgtaatgagcctgcagtctggagtcagttagctagagctcagctgcacagagac
ctggtcaaagaggccattgactcctatatcaaagctgtggatccatcggcatacatggag
gtggttaatgcagccagcaagaacaataactgggaggacttggtgaagttcctacagatg
gctcgtaaaaaggccagagagtcgtatgtagagacggagctgatttttgctttggctaaa
acaaaccgactggccgagctagaagagtttgtcagtgggcccaataatgctcacattcag
caggtgggggacaggtgctatgatgagggaatgtacgaagcggctaaacttttgtacaac
aacgtgtccaactttgctcgacttgcgtctacattagttcaccttggagagtaccaggca
gctgtggacagcgccaggaaagccaacagcacccggacctggaaggaggtttgctttgca
tgtgttgacggcgaggagtttcggctggcgcagatctgcggtcttcacattgtgatccac
gccgatgagctagaagacctgattagttactatcaggaccgcgggtacttcgaggagctc
attgctctgctggaggccgcgctgggcctggagcgggcccacatggggatgttcactgag
ctcgccatcctctactccaagttcaaacctcagaaaatgagggagcacctggagctcttc
tggtcaagagttaacatcccaaaggttctccgagcagccgagcagtctcatttatgggca
gagctggttttcctttacgataaatatgaggagtatgacaacgcagtcatcactatgatg
aaccatgcaacagatgcatggaaagaagggctgtttaaagacatcattgccaaggttgcc
aatgttgagttgtactataaagctctttctttctacctggaatacaaacctctcctcatt
aatgacctgctgactattttgtctccacggttggaccacaatcgagccgtcagctttttt
tctaagatgaatcagctgaagttggtcaaaccttacttgagatcggtccagaatcacaac
aataaggccgttaacgaagcgctcaacaacttacttacagaagaggaagactatcagagc
ctgagggcctccatcgatgcttacgataactttgacaccatcggcctggctcagaggtta
gagaaacacgaactgatcgagttcaggcgcatcgctgcttatctgtacaaaagaaacaac
cgctggaggcagagtgtggagctttgcaagaaggacaaactatacaaggatgcaatgctc
ttcgctgcagagtccaaggatgcagagctggccgaaactctgctgcagtggttcctggag
gaggacaggaaggagtgctttgctgcctgcctgtttgcctcctatgacctcctccaccct
gatgtggtgctggaacttgcctggaggcacaacataatggactttgccatgccctacttc
attcaagttatgagagagtatctcactaaggttgatgaatttgcagcgaaggtgacggtg
gataaactggaagaggcagaaagccatagaaaaactgaggatgatgtaaaggagcctcag
cagatggtgtttggccagcagctgatgttgcccgccgctgcttctcctgtggctcctcag
ccagcatacccggcttacggctatcctgcccctaacagtgctactcccgccgccgccggt
taccctgctcagcccccctacggctacaacatgtag
DBGET
integrated database retrieval system
