Cyprinodon tularosa (White Sands pupfish): 119778330
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Entry
119778330 CDS
T07496
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctul04121
]
119778330 (mkrn1)
Enzymes [BR:
ctul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119778330 (mkrn1)
Ubiquitin system [BR:
ctul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119778330 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-CCCH_9
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119778330
NCBI-ProteinID:
XP_038133435
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MAEAAAASTAASSPTGGWTKQVTCRYFLHGLCKEGDHCRYSHDRSSSKPAAMICKFFQKG
NCVFGDRCRFEHSKPVKKEELPTTQTLPLASASGPQAHPSDPEASSVSPASGAQDWVMAA
EFVPGQPYCGRAEPVKVESSTPLIEELDSNAGPDGKDLQKQLCPYAAVGECRYGVNCAYL
HGDVCDMCGLQALHPSDSAQRSEHTKACIEAHEKDMEISFAIQRSKDMMCGVCMEVVFEK
SNPSERRFGILSNCSHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEDK
EDKQKLIQKYKDGMGSKPCRYFDEGRGTCPFGSNCFYKHAFPDGRLEEAQPQRRQTGSNN
RNRNSRRTPLWDIFDDSADSFDNDDEEMVTFELSEMLLMLLAAGTDDEVTDSEDEWDLFH
EELDDFYEIYL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagcagcgtctacggcggcttcttcacccacaggcggctggacgaaa
caagtcacctgcaggtattttctgcacggcctttgcaaagaaggagatcattgtagatac
tctcacgaccgttccagcagcaaacctgcagccatgatctgcaagttcttccagaaggga
aactgcgtgtttggagaccgatgcaggtttgagcacagcaaacccgtaaagaaggaggag
ctgcccactacccagacgctgccgctagcctctgcctccggcccgcaggcccacccctcc
gaccctgaagcctcgtccgtatcgcctgcatcaggggctcaggactgggtcatggctgct
gagttcgttccagggcagccttactgcggtcgagctgagccggtgaaggtggaaagctcc
acccctctcatcgaggaactcgacagcaacgccggccccgacggcaaagacctgcagaag
cagctgtgtccgtacgccgctgtcggagagtgtcgctatggagtcaactgtgcgtatctc
catggtgacgtgtgcgacatgtgtggtctgcaggctctgcatcccagtgacagtgcccag
cgctcggagcataccaaggcgtgcatcgaagctcatgaaaaagacatggaaatttcattt
gccatccagcggagtaaggacatgatgtgcggcgtctgcatggaggtcgtgttcgaaaag
tccaacccgagcgagcggcgcttcgggatcctctccaactgcagccactgttactgtctg
aaatgcattcgcaaatggaggagcgccaagcagttcgagagcaaaatcatcaagtcctgt
ccagagtgtcgaatcacatccaactttgtcatccccagcgagtactgggtggaggataag
gaggacaagcagaaactcatccagaaatacaaggatggcatggggagtaaaccatgtcga
tattttgatgagggccgtggaacttgtcctttcggctccaactgcttctacaaacacgcc
ttccctgatggacgtctagaggaagctcagccccagagaagacagaccggctccaacaac
aggaaccggaactcgaggcggacgccactgtgggacatcttcgatgatagcgcagactcc
tttgacaacgacgatgaggagatggtgacgttcgagctgagtgaaatgcttctcatgctg
ctcgcagcaggaaccgacgacgaagtgacggattcagaggacgaatgggacttgtttcat
gaggaactagatgatttctatgagatttacctatag
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integrated database retrieval system
