Cyprinodon tularosa (White Sands pupfish): 119778404
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Entry
119778404 CDS
T07496
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04080
Neuroactive ligand-receptor interaction
ctul04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119778404
04082 Neuroactive ligand signaling
119778404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119778404
Ion channels [BR:
ctul04040
]
Ligand-gated channels
GABA-A
119778404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
DUF5522
Motif
Other DBs
NCBI-GeneID:
119778404
NCBI-ProteinID:
XP_038133541
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MFGPGRGCRCGSRMWSRESASSLLICLLVPTALWESRSVKADQGPYDPKENITLFTRILD
RLLDGYDNRLRPGLGDRVTEVKTNIFVTSFGPVSDTDMEYTIDVFFRQSWRDERLTFHGP
MNILPLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECP
MHLEDFPMDFHSCPLKFGSYAYTISEVTYAWTRNASDSVVVEEESSRLNQYDLLGQTVGQ
ETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGV
TTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGK
SVVSEKKKERASLMKKNNAYAVAVANYAPNVSKDSTALPSIAKGGAVDPGKPRADGKAPE
AKKTFNSVSKIDRLSRIMFPVLFGTFNLVYWATYLNREPVIKDMVPSN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtccaggaagaggctgtaggtgtggaagcaggatgtggagcagggagagcgca
tcttcactcctcatctgcctgctggtgcccacagctctctgggaaagcagatcagtgaaa
gccgaccaaggaccttatgacccaaaggaaaacatcaccctgtttacacgcatcctggac
agactgcttgatggatacgacaaccgtctccggcccggtctgggagacagggtaaccgag
gtgaagaccaacatcttcgtcaccagctttggtccggtctcagacaccgacatggagtac
accatagatgttttcttccggcaaagctggagggacgagaggttaacgtttcatggacca
atgaacattttacccctgaacaacctgatggcgagtaagatctggactccagataccttc
tttcacaatgggaaaaagtctgtggcgcataacatgaccatgcccaataagctgctgcgg
atcaaagatgacgggacgctgctgtacaccatgaggttaacagtgcatgccgagtgccca
atgcatctggaggatttccccatggactttcattcctgtccactaaaatttggcagctac
gcctacacaatctcagaggtgacttacgcttggacccggaatgcttcggactcggtggtg
gtggaggaggagagttcccgcctgaaccagtacgacctactcggtcaaactgttggacag
gaaaccatcaaatcaagcacaggtgaatacacagtgatgacagctcatttccacctaaag
aggaagattggctactttgtcattcaaacgtacctcccatgcatcatgacagtcatcctt
tcccaggtgtccttctggctaaacagagaatcagtgcctgctaggactgtgtttggcgtg
accaccgttctaacgatgactactctgagcatcagcgccaggaactccctgcctaaggtt
gcctacgccaccgccatggactggttcatcgctgtctgttacgccttcgtgttctccgct
ctgattgagttcgcaacagtcaattacttcacaaagcgaggctgggcctgggatgggaag
agtgtagtgagtgagaagaagaaagagagggcatctttgatgaagaagaataacgcctac
gcagtagcggtggccaactacgcccctaatgtcagcaaggactccaccgctctcccaagc
atcgccaaagggggcgccgtggaccccggtaagccaagagcggacggcaaggccccagaa
gccaagaagacgttcaacagcgtcagcaagattgacaggttgtcacggattatgttcccc
gttctctttgggacgttcaacctggtctactgggccacctacctaaacagagaacctgtt
ataaaggacatggttccgtctaattag
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