Cyprinodon tularosa (White Sands pupfish): 119778414
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Entry
119778414 CDS
T07496
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119778414
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119778414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
CpXC
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
119778414
NCBI-ProteinID:
XP_038133584
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MGQKDHVEAGTGHILDLGPDLEYLHVAGADRQAGDVDEPPAMDEQGESFTKKATLGSPPA
TTPEESGERDGEGRPTPVEDADGGEVTHTFSKNSHQPLCRTPCVDLGTEGPPESPSDLSG
EPEHESPEPPADPTASEPEPTPGGKDYQTKLEFALKLGYSEVTVRQVLSKLGPDTLINDI
LGELVKLGTKSDGEQPASALTSTSSSSSSSSCGCSDVPERSDSPLPSESLCDQDNLRPIV
VDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHQDITVFVPAWRKEQSRPDAPITDQEIL
RRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKF
IDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPIMPEQKKQPCPYGKKCTYGHKCK
YYHPERGAQPQRAVADELRASAKGCVPSKNQGDAGLVKSHSVPAGTIEAKNGALKRQSDP
SIRALSYSDAEEKLLAKSRLESQKSNVGGSSSSSSSSVGCGGGLTMGGPPSAFSLLQDQQ
SRSGGHLPAPAHDLYPHCESPDLSYYSVTRAYSGLSLSSRRSPDCRYPNDQDLRHGSMGS
AGSECGSESSVSCGSSDSYSDRSCPGCSADTLIEENLIFHNPPSHLYTHHVPPSNHELCS
LHAADYPNIQHNHSSNPIHSYHLGSACGQSCVHEPPPSEVPPKRPLYPLPPHLQHQPLAA
RSSCPGDYQSLPQSNRQPPGSPVGRCLAPTRTESVSDSRLYEHLSASHHHHRPKALPSWE
TYYRQPSLPPPRYEPSAYQSLPDTHQTSWHPPGWPQEGYSQHHSSHPALHPSPTRYRSHP
PPSAPSPHPPYPPHSSHLGFPPHPPPPYRPQHPESPVHGRYEDAREKVYINLCNIFPSEL
VSRVMARSPHVMDPQQLAAAILAEKAQSGY
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcgggaacgggccacatcctggatctggggccggac
ctggagtatctccacgtagccggggccgaccggcaggctggcgacgtcgacgaaccccct
gctatggatgagcagggggagagcttcaccaaaaaggctacgcttggttctcctccggcg
acaacgccagaggagagcggcgagcgtgatggagaggggaggccgacgcctgtggaagac
gcagacggaggggaggtcacgcacaccttcagcaaaaacagccaccagccgctgtgccgc
acgccgtgtgtggatttggggacagaaggacctccggagtctccgtctgatctctcagga
gaacccgagcatgaatcgcccgaacccccagccgaccccacggcatcagaaccagagccc
acgccgggagggaaggactaccagaccaagctggagtttgccttaaaactgggctactct
gaggtgaccgtgcgtcaggtgctgtccaagctgggacccgacaccctcatcaacgacata
ctgggcgaactggtcaaactgggcaccaagtcggacggcgagcagccagcgtcagccttg
acctctacctcatcatcttcatcatcgtcgtcttgcggctgctctgatgtgccggagagg
tcggactcgccgttaccctcagaatctctctgcgaccaggacaacctgcggccgatcgtg
gtggacggcagcaacgtggccatgagccacgggaacaaagaggtgttttcctgccagggc
atccagctggctgtagactggttcctggagcgtggccatcaggacatcacggtttttgta
cctgcttggaggaaagagcagtcccgccccgacgctccgataacagaccaggagatcctg
cggcggctggagaaggaaaagatcctggtcttcaccccctcgcggcgcgttcaaggtcgg
cgcgtggtctgttatgacgatcgcttcattgtcaagctggcttatgagtcagacggcatc
atcgtctccaatgacaactacagagacctggccaatgaaaagcccgagtggaagaaattc
atagatgagcgtctgctcatgtattccttcgtcaatgacaaattcatgcctccagatgat
cctcttggacgtcacggccccagcttagacaacttcctgaggaaaaggcccatcatgcct
gagcagaagaaacaaccctgtccatatggaaagaagtgcacatatggccacaagtgtaag
tactaccatcccgagagaggagctcagcctcagcgcgctgtggccgacgagctgcgggcc
agcgccaagggctgcgtcccctccaagaaccagggggatgctggattggtgaagagccac
agcgtgccagctggcaccatcgaggcaaagaacggcgccctaaaaaggcagtcggatccc
agcattcgagctctgtcgtacagcgacgctgaggagaagctattggccaaaagtaggttg
gaaagtcagaagagcaacgtaggagggagcagcagcagctccagtagtagcgttggctgc
ggcgggggtttaactatgggagggcccccgtctgcttttagccttctgcaggaccagcag
tccagatcaggtgggcatcttcctgcccccgcccatgatctctacccgcactgtgagtct
ccagacttaagctactactcagtaacacgggcctactctggcctgagcctctcctcccgg
cgaagcccggactgccgctaccccaacgatcaggacctacggcacggctccatgggctca
gctggctctgaatgcgggagtgaaagcagcgtcagttgtggcagcagtgactcctatagc
gacagatcctgtcccggatgctccgccgatactttaatagaagaaaaccttattttccat
aacccccccagccacctctacacccatcatgtccccccctctaaccatgagctgtgcagc
cttcatgctgcagattacccaaacatccaacacaaccactcctctaatccaattcattcc
taccacctgggctctgcttgtggacagagctgcgttcatgagccgccgccatcagaggta
ccccctaagcggcccctctacccgctgccccctcacctccaacaccagcccctagctgct
cgctccagctgccccggcgactaccagtctctgcctcagtccaaccgtcagccccccggc
tcccccgtcggccgctgcctggcgcccacgcgaaccgaaagtgtatccgactcccgcctg
tacgaacatctctctgcgtctcaccatcaccatcgaccgaaagctctgcccagctgggag
acttactatagacaaccatcgctgccgccgccgaggtacgagccgtcggcctatcagagt
ctccccgatacgcatcagacatcttggcacccaccgggatggccccaagagggctacagc
cagcatcactcgtctcacccagctctgcacccgtcccccacacgctaccgaagccacccc
ccaccatcggccccctctccacacccgccttacccccctcacagctcccatcttggattt
cccccacaccctccacctccatacaggccacagcaccccgagtctccagtgcacggccgc
tatgaagacgccagggagaaggtgtacataaacctttgcaacatcttcccctcagaactg
gtaagccgggtaatggccaggagcccccacgtcatggacccccagcagctggctgccgcc
atcttggcagagaaagctcagagtggctactga
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