Cyprinodon tularosa (White Sands pupfish): 119778455
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Entry
119778455 CDS
T07496
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119778455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119778455
03036 Chromosome and associated proteins [BR:
ctul03036
]
119778455
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119778455
Coactivators
SAGA/TFTC/STAGA complex
119778455
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119778455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
119778455
NCBI-ProteinID:
XP_038133597
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MIMAANPSGNDVQKRSSCGAAENRDSIKVRIIQVPANSAPIAAVTSQHASSSKSDSVTHH
STQGPQPTSSTIAVSGLHLSPSLVVVGKASTPVGVNLVSQNVAAPGMAPGLAPGKNVVIT
VPRSAVSQPVTSTPPQSASPQFPANIQIPAGMVLIRSDSGQLMMVSQQVLSQAQQGQRSF
SGQPPRILTQQVSTPLGGKSNDGKVRVIRTAAPPSFQTALAQKNAVVVGVAPRLAAVPGT
GSGPEQGKRPHTEADRRADTKVEPVMTVSQETLESVKKCKNFLITLIKLASGDNRSSNMA
DNVRRLVRNLLEGKLEAEEFTEQLYKELKSTPQPCLVPFLKKSLPAVRWLTADPQLFIQK
ASSHPPGPPPIKQPAPPSGMTTSQQVRGVASRPASMTSPQPKTDLLTKSGSNQKLLLVQL
GKPVPGTSAGKQSADRNTLLSGRSSFKESSGSFREDDDINDVAFMAGVNLGEENARILTS
AVGSVVQSCQDQLFLSPHALLSRILHKGQLLGVMEVGPEVVAVVSHATQERLRTLIEKLS
VMAEHRTVSLTEDPWHCKVNEVRTQLRFLEETEMLKKKRRDAVEREKLLRLAKSRSQTED
PGLQQLKQRAREMKQLEEAQQQHRDANLTALAAIGPRRRRAADQPSGQVSLLPRGGVQRG
PRVMLKDLLMCMEQDPSLRHTLRLYRAML
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgataatggccgccaatccctcagggaatgacgttcagaagcggagctcctgtggagct
gctgagaacagagactctatcaaagtgaggataatccaggttccagccaacagcgcgccc
atagcagcggtgacttcccagcatgcatcttcctccaagagcgactctgtgactcaccac
agcactcaggggcctcagcctacttcgtctacaatcgcagtgtcaggacttcacctttcc
ccttcactcgtggtggttggcaaggcgtcaacgccagtaggagtgaatctggttagccag
aacgtagcggccccaggaatggcccctgggttggcccctggcaagaatgtggttataacc
gtgccccgatcagcagtttcacagccagtcacctcaacgccgccacagagtgcctctcca
cagtttcctgccaatatccagattccagcaggtatggtgctgatccgcagtgacagtggt
cagctgatgatggtatctcagcaggttttgtctcaggctcagcagggacagaggagtttt
agtggccaacccccccgaatactgacccagcaggtatctacacctttaggaggtaaaagt
aatgatgggaaggtcagagtgatcaggacggcagcccctcccagcttccagactgcattg
gcccagaagaacgccgtggttgttggtgttgctcccagattagcggcggtccccggcacc
ggttctggccctgaacaggggaagcgtcctcacactgaggctgaccgccgagcagacact
aaagtggagccagtgatgaccgtcagtcaggagactctggaaagtgtgaagaagtgtaag
aacttcctgataactctgatcaagctggcatccggtgataacaggtcttccaacatggcc
gacaacgtcagacgactggtccggaatctgctggaagggaagctggaagccgaggagttt
accgagcagctctataaggagctgaagtccactcctcagccctgtttggttcctttccta
aagaaaagccttcctgctgtccgctggctcactgcagatcctcagctcttcattcagaaa
gcttcctcacatcctccgggacctcctcccatcaagcagcccgcgcctccttcaggcatg
accaccagccagcaggtgaggggcgtggcttccagacctgcatcgatgacatcacctcag
cccaaaactgacttgctgacaaaaagtgggagcaaccaaaaactcttgctggtccagtta
ggaaaaccagttccagggacgtctgcagggaagcagtctgccgatcgaaacacacttctc
tccggcagaagttcatttaaggagagttcaggatcgttcagggaagatgatgacatcaat
gatgtggcctttatggcgggagtgaacctgggagaggaaaatgctcggatcttgacgagc
gccgtaggctctgtggttcagtcctgccaggatcagctcttcctttctcctcacgctttg
ctcagcagaatccttcacaaaggacagctgctgggagtaatggaggtgggtccagaggtg
gtagctgtggtttctcatgctacccaggagcgcctccgtacactgatagagaagctcagc
gtgatggcagaacatcgcactgtttccctgacggaggatccctggcactgcaaggtgaat
gaggttcgcactcagctacgcttcctggaagagacggagatgttaaagaagaaaaggaga
gatgctgtggagagagagaagctcctgcgtctggcaaagagccgctcccagactgaggat
cctggactgcagcagctgaagcagagagccagagagatgaagcagctggaggaagctcag
cagcagcaccgagatgctaacctcaccgctctggctgccatcgggccccgcaggaggaga
gcagcagatcagcccagcggtcaggtgtcactgctgcccagagggggggttcagaggggg
cctcgtgtgatgctgaaggacctgctgatgtgcatggagcaggatccctccctacgccac
accctgaggctctacagggccatgctttga
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integrated database retrieval system
