| Entry |
|
|---|
| Symbol |
ddx3xb
|
|---|
| Name |
(RefSeq) DEAD-box helicase 3 X-linked b isoform X1
|
|---|
| KO |
|
|---|
| Organism |
ctul Cyprinodon tularosa (White Sands pupfish)
|
|---|
| Pathway |
| ctul04622 | RIG-I-like receptor signaling pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:ctul00001]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119778530 (ddx3xb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ctul03019]
119778530 (ddx3xb)
03041 Spliceosome [BR:ctul03041]
119778530 (ddx3xb)
03036 Chromosome and associated proteins [BR:ctul03036]
119778530 (ddx3xb)
Enzymes [BR:ctul01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119778530 (ddx3xb)
Messenger RNA biogenesis [BR:ctul03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119778530 (ddx3xb)
mRNA cycle factors
Common to processing body (P body) and stress granule
119778530 (ddx3xb)
Spliceosome [BR:ctul03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119778530 (ddx3xb)
Chromosome and associated proteins [BR:ctul03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119778530 (ddx3xb)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
733 aa
MSHVAVENAHGLEQQLAVLDLSAPDGQGGGTNRRYIPPHLRNKDASKNVGNAFAAGRPGG
YTIAPAANYGWDAGRNNFVNGYHDNRMAGNSFNRGPPRMERGRGGVAGGSFRGNRGGSFN
PINPAQPISFDATGWNPTKEAYSSFGNNRGKSAFFNDRGNANRGRFDHGGFGGGGGGNSR
WVEEARDDGDWSKPMPRNERLEHELFSGSNTGINFEKYDDIPVEATGQNSPHHIESFQDV
DMGEIVMGNIALTRYTRPTPVQKYAIPIVKSKRDLMACAQTGSGKTAAFLLPILSQIYTD
GPGEALNAAKASGQDNGKYGRRKQYPIALVLAPTRELALQIYDEARKFSYRSRVRPCVVY
GGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQI
RRIVEQDTMPHKGIRQTLMFSATFPKEIQVLARDFLEDYIFLAVGRVGSTSENITQKVVW
VEESDKRSFLLDLLSATVIPNEVQDNTGDNVEKPGKDSLTLVFVETKKGADALEDFLYRE
GYACTSIHGDRSQRDREEALNQFRSGKCPILVATAVAARGLDISNVKHVINFDLPSDIEE
YVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEHQHKSSS
RGRSKRFSGGFGARDYRQTAAGGSAVGFGGRGGRNQQGHGGNRGFGGGGFGNFYTSDGYG
GNYSHSQVDWWGN |
|---|
| NT seq |
2202 nt +upstreamnt +downstreamnt
atgagtcatgtggccgtcgaaaatgcccacggtctagagcagcagctcgctgtcctagac
ttgagtgctccggatggacaaggcggaggtactaataggcgatacattcctccacattta
cgaaacaaggatgcatctaaaaatgtgggaaatgcctttgctgctggccgaccagggggc
tacaccatagcgcctgcagcaaactatgggtgggatgcagggcgcaacaactttgtcaac
ggctaccacgacaaccgcatggctggcaactcctttaaccgcggtccgccacgtatggag
cggggtcgcggcggtgttgccggaggcagtttccgcggtaacagggggggctcattcaac
cccatcaacccagctcagcccataagctttgatgctactggctggaacccaaccaaagag
gcttatagcagctttggcaacaaccgaggaaagtctgcattcttcaacgacagaggcaac
gccaaccgaggaaggtttgatcacggcggatttggtggcggcggaggaggaaacagtcgc
tgggtggaagaggcaagggatgatggagactggtccaagccaatgccgcgcaacgagcgc
cttgaacacgagctgttctccggcagcaacactgggatcaactttgagaaatacgatgac
attcccgtcgaggctacaggacaaaacagccctcatcacatcgagagtttccaagatgtc
gacatgggggagatagtgatgggcaacattgctctgacccgctacaccagaccaactcct
gtacagaaatatgccattccaatagtgaagtccaagagagacctgatggcctgcgcacag
acgggatctggaaagacggcggcgttcctgcttcccattctcagccagatctacacagat
ggaccaggagaggctctgaatgctgccaaagcctcaggacaggacaatggaaaatatggc
cgacgtaagcagtaccccatcgcactggttctggctcctaccagagaactggcgctgcaa
atatacgacgaagccaggaagttttcctaccgctccagagtgcgtccctgcgtggtgtat
ggaggagcggatattggccagcagattagagacctggagagaggctgccacctactggta
gcaacacctggtagacttgtcgatatgatggagagaggcaagattggattagactactgc
aactatctggtcctggatgaagcagatcgcatgctggacatgggctttgagccccagata
agacgcattgtggaacaggacaccatgccacacaaaggcatcagacagaccttgatgttc
agcgctacgtttcctaaagagatccaggttctagcaagggattttctggaggattacatc
ttcctggctgtgggcagagtgggttccacctcagagaacatcacacagaaagttgtgtgg
gtggaagagagcgataagagatctttcctccttgacctgctcagcgctacagtcatcccc
aacgaggtacaggacaatactggagacaacgtagagaaacctggtaaggactccctgacc
ctcgtttttgtggagaccaagaaaggagcagacgccttggaggacttcctgtaccgggag
gggtacgcctgcaccagcattcacggcgaccgctcccagagagaccgcgaggaggcactg
aaccagtttagatcgggaaagtgtcccattctggttgcaactgcggttgcagctcgaggt
ctggacatctccaacgtgaaacacgtcattaactttgaccttccgagtgacatagaggag
tacgtccatcgtatcggacgtacggggcgagtcggaaacctgggcctggccacatcgttc
tttaacgacaaaaacgggaacatcacaaaggacctgctggatatcctggtagaagctaaa
caggaggttccctcatggctggagagcttggcttatgagcaccagcacaagagtagcagc
agggggcgctctaagaggttctctggtggttttggagctcgggattatagacagacagcc
gctggaggcagcgccgtgggattcggggggcgaggaggacgcaaccagcaaggacatgga
ggaaaccgtggctttggaggaggtggttttgggaacttctacacaagcgacggctatgga
ggaaattactcacattctcaagtggactggtggggcaattag |
|---|
