Cyprinodon tularosa (White Sands pupfish): 119779087
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Entry
119779087 CDS
T07496
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119779087 (pkd2)
04040 Ion channels [BR:
ctul04040
]
119779087 (pkd2)
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119779087 (pkd2)
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119779087 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
119779087
NCBI-ProteinID:
XP_038134543
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MSSSRVRPQSQAGRSPRAAGSSEGIEMENIQHPDMALGGIIGAPSPPSRQAWSRDNPVFE
PEEEILEADWPQASPGRRSVSTASSGSSSSGSAHITRGGLYPTPTPTIHGRQQDRRQPRS
CLKHILQKIRTLWGTELMEDGDSSRERYLRNVLREMLTYVGFLITVCVLTYGMVNSNMYH
YTKVMSQLFLDTPLSPGEPTTFRSLSTMEDFWKFTQGPFLSGMYWEVWYNNKSLPENQSF
IYYENLLLGVPRLRQVKVRNESCSVHQDLRNELHDCYNIYTPSNEDTAPFGPKNGTAWVY
TPESEMNSSSHWGQVSKYGGGGYYQDLSRTKEESANHLQLLKDNLWLDRGTRAVFLDFSV
YNGNINLFCIARLLVEFPATGGAVTSWHFQTVRLIRYVSSWDYFVCVCEVAFCLFILYYV
VEEVLEIHIHRLHYFKSMWNCLDVLIVVFSVVAIIMNITRTAMARNLLGGLLENYSAHPS
FEALANLQVQFNNMAAVIVFFSWVKLFKFINFNKTMSQLSTTMSRCAKDLVGFAIMFFII
FLAYAQLAYLVFGTQVDDFSTFQASVFTQFRIILGDFDFSEIEEANPVLGPVYFTTFVFF
IFFILMNIFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGCNKALMKLRLKKTPVDPISN
GLQQAGAKMNFDELRQDLKGKGHTDAEIQAIFAKYDQDGDPELTEHEHQQMRDDLEKERE
DLEMERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSYEEFQVLVRRVD
RMEHSIGSIVSKIDAVIVKLEGMERAKLKRRDVLGRLLDGVIEDERLGRDTDVHRDQMER
LVRDELELWESDDLGSQVSHTPAGPRARPPSSLSADGLDVSSNGGAHV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctctcgggtcagaccccagagccaggcgggcaggtcgccccgagcagcgggc
tccagtgaggggatagaaatggagaacatccagcacccagacatggctctgggaggaatc
atcggtgcaccgtctccaccatccaggcaggcgtggagccgagacaacccggtgttcgag
ccggaggaagaaatcctggaggcggactggcctcaggcgagtcccgggcggaggtctgtg
tccacggcctccagcggcagcagcagcagcggcagcgcccacatcaccagaggggggctg
tacccaacaccgacccccaccatccatggccggcagcaggacaggcggcagccccgcagc
tgtttgaagcacatcctccagaaaatcagaactctgtggggaactgagctgatggaggac
ggcgacagcagcagagaaaggtacctgagaaatgtgttgagggagatgctcacatatgtc
gggttcctcatcactgtctgcgttctgacatatgggatggtgaactctaacatgtaccat
tacaccaaagttatgtcccagcttttcctggacacaccactgtctcctggggagccaacc
acatttaggagcctctccaccatggaggacttctggaagttcacccaggggcccttcctc
agcggcatgtactgggaggtgtggtacaacaacaagagcctgcctgagaatcagagcttc
atctactatgagaaccttctcctcggcgtaccgcggctccggcaggtcaaggtccgcaat
gagtcctgctctgtccaccaagacctgaggaatgagcttcatgactgctataacatatac
acccccagcaatgaggacaccgccccctttggtccaaagaatggaacagcgtgggtgtac
actccagagagtgagatgaacagcagcagccactgggggcaggtgtcgaagtatggaggt
ggagggtactaccaggacttgtcccgaacaaaggaggagtcagctaaccatctgcagctt
ctcaaagacaacttgtggctggacagaggcaccagagcagtcttccttgacttctcagtc
tacaacgggaacataaaccttttttgcattgcaaggttgctggtggagtttccagccacc
ggaggagctgtgacctcctggcacttccagacggtgcggctgatccgatacgtgtccagc
tgggactacttcgtctgtgtgtgtgaggtggccttctgcctcttcatcctctactacgtg
gtggaggaggttctggaaatccatatccaccggctgcactacttcaaaagcatgtggaac
tgtctagatgttctgatcgttgtgtttagtgttgtcgccattataatgaacataaccaga
acagccatggctcgaaatctgctcggtgggctgttggagaactactctgctcaccccagc
ttcgaggctctggccaacctccaggtccagttcaacaacatggccgcggttattgtcttt
ttctcctgggtcaagctgtttaagttcatcaacttcaacaaaaccatgagccagctgtcc
accaccatgtcccgctgtgccaaagaccttgtgggcttcgccatcatgttcttcatcatc
ttcctggcatacgctcagctcgcctacttggtgtttggaactcaagttgatgatttcagc
accttccaagccagcgtgttcacccagttccgcatcattctgggcgactttgacttctca
gagatcgaggaggcaaacccagtccttggaccagtttattttactacgtttgtcttcttt
atattctttatattaatgaacatattcctggctataatcaatgacacatactctgaggtg
aaggctgatatgtcccagcagaggtctgagatggaaatgacggacctcatcaagaagggc
tgcaacaaagctttgatgaagctaaggctgaagaaaacgcccgtggatcccatttccaat
ggtttgcaacaagcaggcgctaaaatgaactttgatgagctccgtcaggatctgaaagga
aaaggacacacggacgcagagattcaagccatcttcgccaagtacgatcaggacggcgac
cctgagctgacggagcacgaacaccagcagatgagagacgacctggagaaagagagagag
gacctggagatggagcgcaattctctgacccgacccagcagtgggcggagcttccctcgc
actcaggatgactcagaggaggatgatgatgaggactctggtcacagctcccgtcgccgt
ggcagcagctctgggggagtctcctacgaagagttccaagtgctggtgaggagagtggac
cgcatggagcactccatcggcagcatcgtgtcgaagatcgatgcagtgattgtgaagctg
gagggaatggagagagctaagctgaaaagaagagatgtgctgggcaggctgcttgacgga
gtcatcgaggatgagcgtttgggtcgggacactgacgtccacagggaccagatggagcga
cttgtgagggacgagctggagctttgggagtcagacgacttgggctcccaggtcagccac
actcctgcgggcccacgggctcgtcccccgtcctccctttccgcagacggcctcgacgtg
agctcaaatggaggcgcacacgtctaa
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