Cyprinodon tularosa (White Sands pupfish): 119779135
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Entry
119779135 CDS
T07496
Symbol
prdm1c
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119779135 (prdm1c)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119779135 (prdm1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2HE
Zf-C2H2_ZNF451
zf-met
Motif
Other DBs
NCBI-GeneID:
119779135
NCBI-ProteinID:
XP_038134597
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MCGSSQGFKASSSECTTDMLASERSPQSIGATTVALTDTQEDMRSWSESDFEEKCTYIVN
DQFIDEESKSHGKTRAERSLPRNLTLKRNHSSREVLGVTSKEFIPKGSRFGPFVGKSYTS
KTLPKDADSRYFWTVFSDGQIHHILDSLNEEQSNWMRYVNPARSVEEQNLVACQTGLNIF
FYTIKPLQPGQELLVSYSHEFAQRCYYPHLQQLAADKNEQIQAHERTKGKRGHTVSEILR
DEPLKPKSICLRNQDCQVFQTGVSIFPSCPSVVYPIQANLESGYNYGYLPLPPLAPYGTA
TAKRPEISSPFPTGLHIALQHTQDPCKTEPHQEPCVPSEILSNLRHSSYLVPHYSLGLLP
HTLPFYSERLKPHLTNSSDFMPFNSYAHILHPSGSGSKNLSLASSNCKQELILSQSSEHK
GNNDLYSKKANYLKKTSSDLSDVKHSACTNVYTDLSVSSKASSSPVDFKLCKENPFAPRE
CSPPVGTAASSNYLPSRPTSANQGNTEDALDLRRQKKEGSIIGYKTLSYPLKRQNGKIRY
ECNICGKVFGQLSNLKVHLRVHNGERPFKCQTCNKNFTQLAHLQKHYLVHTGEKPHECKV
CHKRFSSTSNLKTHQRLHSGERPYQCKLCPARFTQYIHLKLHKRLHTGEGTHQCPRCPST
YLHHCSLQVHLQGFCPLSPSASRRLSPEELQRVNSEIERFDMSEAAEQLDVMATDTETNK
GNVIDLIQKIENNILSFQDAVKVKTELNIGNGVYQCSDALSQSHSFMTDKREAGARMHFR
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggctttaaggcctcctcttctgaatgcaccacagacatgtta
gcctcagagaggtcaccgcagagcataggagccaccactgtagctttgacagatacacag
gaagatatgagatcatggagcgagtctgattttgaggagaagtgcacttacattgtgaat
gaccagtttattgatgaagagtccaaaagccatggcaagacaagagctgagagatcctta
cccagaaacctcaccttgaaacgcaaccacagctctagagaggtgcttggggtgaccagt
aaagagtttattccaaagggaagccgttttggccctttcgttggcaaaagctacaccagt
aaaacattgcctaaagatgcagacagtcgctacttctggacggttttctcagatgggcaa
attcatcacatcctggatagtttgaatgaggaacaaagcaactggatgcgctatgtcaac
ccagcacgatcagtagaggagcagaatctagttgcctgccagactggcctgaacatcttc
ttttacacaattaaacctcttcagccaggtcaggagctactggtctcgtacagccatgaa
tttgcccagcgctgttactatcctcatcttcaacaattagctgctgacaaaaatgagcaa
atccaggctcatgagaggacaaaaggaaaacgaggacacactgtttctgagattctcaga
gatgaacctctcaaacctaagtctatctgtctcagaaaccaggactgtcaggtgtttcag
acaggtgtctcaatttttccctcgtgtccgagcgttgtatatccaatacaggccaacttg
gaatctggatataactacggatatctccctttgccacctttggcaccgtatggcactgct
acagccaaaaggccagagataagcagtccctttccaactggtttgcatattgccctgcaa
cacactcaagatccttgcaaaactgaacctcaccaagaaccatgtgtgccgagtgagatt
ctctccaatcttagacacagttcttacctagtgccacactactcactgggccttctgcca
catacattaccattctacagtgaaagactaaaaccacacttgacaaattcatcagatttc
atgcctttcaacagctatgcacacatcctacatccttcaggtagtggatccaaaaactta
tcacttgcatcatcaaattgcaaacaggaactcattctttcacaaagtagtgagcacaaa
ggtaacaatgacctctactcaaaaaaggcaaactacctcaagaaaacttccagtgacctc
agtgatgtcaaacactctgcttgcacaaacgtctacacagacctcagtgtgtctagtaag
gccagctcttctcccgttgactttaaactctgtaaagaaaatccttttgcacctcgggaa
tgttcaccccctgttggtactgctgcctcctcaaactaccttccttccagacctacctct
gccaatcagggcaatactgaagatgcattggatcttagacggcaaaagaaagaagggtca
atcattggctacaagaccctttcttacccacttaaaaggcaaaatggaaaaattcgttat
gaatgcaacatctgtggaaaggtcttcgggcagctgtccaatctcaaggttcatctaaga
gttcacaatggggagcgtccgtttaagtgtcagacctgtaacaagaactttactcagctg
gcacacttgcaaaaacattacctagttcacacaggagagaagcctcatgagtgcaaggtg
tgccataagcgatttagcagcactagcaaccttaagacccaccaacggttgcactcaggt
gagaggccttaccagtgcaagctctgcccagcccgatttactcaatatatccacctcaaa
cttcacaaacggttgcacacaggggaagggacccaccaatgtcctcgctgcccctctact
tatcttcaccactgcagcctacaggtccacctccaaggcttctgccccctgtccccctca
gcatcccgtaggctgtcacctgaggagctacaacgagtcaactctgagatagagaggttc
gacatgagtgaggcagcagagcagctcgatgttatggccactgacacagaaacaaacaaa
gggaatgtcattgacctcatacaaaagatagaaaataacatcttaagcttccaggatgct
gtcaaagtgaagactgagctgaacatcggcaacggagtgtaccagtgctcagatgcgctg
tctcagtcacatagttttatgaccgacaagcgtgaagctggagcaaggatgcatttcaga
gagtga
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