Cyprinodon tularosa (White Sands pupfish): 119779220
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Entry
119779220 CDS
T07496
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119779220 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119779220 (exosc8)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119779220 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119779220
NCBI-ProteinID:
XP_038134735
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELFEFRTTTLNIGSISTADGSALVKLGNTTIIC
GIKAELANPTTEAPDKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSDLIK
TEDLCIERGKLCWVLYCDIMCLDYDGNILDACIIALLAALKNTQLPEVAVNKETCLPEVD
LEKRQRLRIHRHPVGASFCVFDDSILIVDPTAEEESLSTAHLTVVTDEEGRLCSVHKPGG
TPLSGEKLQEGINRATARQLEIHKLINKVLDSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcttcaagactgcagagcctctggagtatcacagaagctttctgaaagaa
aactgtcgacctgatgggcgggagttgtttgagttcaggaccacaacactgaatattggg
tccatatccacagcagatggttcagcactggtgaagctgggaaacacaaccattatttgc
ggcattaaagctgagctggctaaccctacaacagaggcccctgataaaggctacattgta
cccaacgtggacctgccgcctctgtgttcttcccgttttcgtcccggtccgccaggagaa
caggcccaagctgccagccagtttattgctgatgttattgaaagttctgacctgattaaa
acagaagacttgtgcatcgaaagaggaaagctctgttgggtgctctactgcgacattatg
tgcctggactatgatgggaacattctggatgcttgtatcatcgccctgcttgctgcatta
aaaaacacacagctcccagaagttgcagtaaacaaagagacatgtttacccgaggtggat
ttggaaaagcgacagaggcttcgcattcacagacatcctgtcggtgcctctttttgtgtt
ttcgatgactccatactgatcgtagaccccacagctgaggaggagagtctgtcgactgca
catcttaccgtggtcacagatgaggagggccgtctctgttcggtacacaaaccaggtgga
actccactgtcaggagagaagctgcaggagggcatcaaccgagcaacagccagacaactc
gagatccacaaactcatcaacaaggttctagacagtgtgaagacggcgcagtaa
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