Cyprinodon tularosa (White Sands pupfish): 119779292
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Entry
119779292 CDS
T07496
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119779292 (zc3h13)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
119779292 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
119779292
NCBI-ProteinID:
XP_038134846
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSGSSSSTTTSSATNPAAAPSRRPSVFERLGPSTGSNAADSHC
RNWLKTGTCSYGNTCRYTHGTQPRSKGFTFSRTTERPTGDLRERMKNKRKDVDPENLKRD
LDEQTSPTVRQRDSSRGRHREKEDIKITKERTPASEEETAEWETNREDSDIGDYDYELSL
EMKRQKIQRELMQLEQENLDKREDGAKKDETPTKTRSAGLPKVSGELLSSKESPTSRKSS
SSPKHKGAAKGAGSGKKEKKTSVAVAVPETTRATKGSHGKKKGPRTPSPPPPVPLDIPVV
GKKHKGKHKNKEKAEEKQKEGKDRGRDTEKHKEKKEKRRDRSDSSHKAKRVVTSDDHSGS
VSPSRDASPPARKKSASPKVSSHKTSSLSFSSQSRSPSPLRHHRSPTPSRHHSPSSHSGS
SGHRHSPSPRRRRSSSPSYHRSSGSQIAASSPSHSRRSRSPHDASSPHRRSNRSSPVRHH
SRGRERSRGERERTPPTQERRHDHRDESRSKREKERDDRDYDSEIVSSRDDRESREARDR
RDVRERGREATRDSRDNRDSRDLKDSRECKAETRSSRESLERREREKERGREKERDRSDA
YRKEELGSDDRAYGRGHGRDDGGRSEGRTESKADRTERTSRGRGRASDVSDKGSNRNSRN
SQLDGGYDNWESRSSTARDRSVERSGAERSSDRASERERYESDRRDHARDSSYDRRGGHG
EREHRDNRERGSPNRYQRRSEESEREERRTDRAEDRRDDRGRERDRDRERERDREREKEK
EREREREKEREKEREAERERAREREREREREREREREREREEREREREREEREREREREE
RERERERKEREREREQRERERQREWEERERGREERRERRDDSRDERTVRDDRKISRKRLR
VESSPSPQPLPKRTTRDFSPADSDGYNSSEDKSERLTGRGQPKLHPQPLLPSPVCPPPSD
NGDKHRLPSQVVRPQDRLSRSPQRSSTSSEKGAYWKEEERRGAGDKREARSRNDDTETRA
DRARGGERRGEYFADVSSDSRSRGRDQRESTPPPPPAALPVGAESREATGPPPHEESKKK
TKTQKKGLKKGRKDEDVSGGNILVPAAERFNPEPPASTSSDVPIHSPRKGAKKKGHERKR
KRSSGGESDVSQEETSAQQPQNKRKRGPRTPPPSMRPDRHGTNTERSPVFKSNNFSDWSD
EEEPERVCPAEVQAPPPPAERTPSEPLRRGGGHRMGRDRDRGHAPTIAPLLSPDPPMLLQ
TLTPQPLMSQPLMSQPLLRKPPPEQARSSSMGSTQSRTSSRRPRSPSIESPCLEDPQGPR
MRRGRPQGSHSRDRERERELERERGMVGDPPGGERKSRIDQLRRGEPSRSTSSDRQDSRS
HSSRRSSPDSERQGRSRSRAGSYDSREREREREPFERDRERERKDFRPQQNQQPPLHLQQ
PIQPQRDWEPEPRDWPSRGREPLLMRPVREPLLRGERDIRERERLLPEGLIQQHERERDR
DSRGDRGMDRERSMLDLPPHADPRAPGRGDARGDIRGDLMRQDRSDFEPLLPREAFSPAE
PEKSSNSHLPGDQRELEKAESIDGDDDGKEDEQSVASVAEEYEPISDDELDEILADSQKK
EDQQEEEKITGPLDVIDVDWSSLMPKQKPEPRAAGAALLRFTPGAVLLRAGISKRLAGPE
LLEQVKEVCKSELDDPKDADKLFEHDLGALNMAALNRRVERAGLLSNLGPCCKALCARRD
FAIRRQLLKNEKGQTKQYPTPPVVDQELLQMSIRLFRRTMASQTSAPERVESGSAPAAEA
AETDSSKLSTAQEVCVS
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtgacagtggagaattcaaaaactatatccgacagcggg
agcagcagcagcaccacgaccagcagcgccaccaaccccgccgcggcgccctctcgcagg
cccagcgtgtttgagagactcggtcccagcactggtagtaatgctgctgatagtcactgc
agaaattggctgaagactggtacctgcagttacggcaacacttgccgctatacacatgga
actcaaccccgaagcaaaggattcaccttcagccggacaaccgagaggcccacaggtgat
ctgcgggagaggatgaagaataaaagaaaggatgttgacccggaaaacctgaagagagac
ctagacgagcaaacatctcccacagtaagacagagagattcctctagagggcgacacaga
gagaaggaggacataaagataacgaaggaacgtaccccggccagcgaagaagagacggct
gagtgggaaactaatcgtgaagattcagatattggtgactacgactacgagttatccctt
gagatgaagcggcagaaaattcaacgagagctgatgcagctggagcaagagaatttggac
aagagagaagatggtgccaagaaagatgagacccccaccaaaacaagaagcgcgggtttg
ccaaaggtgtccggtgagctgttaagctctaaagagtcgcccacttccagaaagtccagc
agctcccccaaacacaaaggggccgccaaaggagccggctctggaaagaaggagaagaag
acatcagtggccgtagctgtgccagaaacaaccagagcgacaaaaggcagccatggcaag
aagaaagggccgcgcacgcctagtcctcctcccccggtccctttggacattcctgtggtt
gggaagaagcacaaaggcaaacacaaaaacaaggaaaaggccgaggagaagcagaaggaa
ggcaaggatcggggcagagatacagaaaaacacaaagagaagaaggagaagcgcagggat
cgttcagacagttcccacaaggccaagcgtgtggtgacatcagacgatcattcgggcagc
gtgtctccctccagggatgcttcgcctccagccaggaagaaatctgcctctcccaaagtg
tcttcccataaaacctcttccttatccttctcctctcaaagcaggtctccttccccccta
cgccaccaccgcagcccgactccttctcgacatcactccccctcgtcccactccgggtct
tctggccatcgccactccccttctcctcggcggcggcgctcttcgtcccccagctaccac
agaagctccgggtcgcagatcgccgcctcctcgccttcccactcgcggcgctcccgatcc
cctcatgacgcgtcctccccacatcgacggtccaacaggtcgagccctgtcaggcaccac
tccagggggagagagaggagccgcggagagcgggaaaggaccccgccaactcaagagcgc
agacatgatcacagagatgagagccggagcaagcgagagaaggaacgtgatgatcgcgac
tacgactccgagattgtctcctccagagacgatcgggagagcagagaggcccgtgatcgc
agggacgttcgtgagaggggaagggaagcgacccgcgattcccgggataacagagacagc
agggacttgaaggactcgagagagtgcaaggcggagacccgctctagccgagagtcgctg
gaacgccgggaacgggagaaggagagggggagggaaaaggaaagagacaggagtgacgcc
tacaggaaggaggagctaggttcagacgacagggcctatggaagaggccatggacgggac
gatggaggcagaagcgaagggaggaccgagagcaaggcggacaggaccgagaggaccagc
agaggaaggggacgagccagtgacgtatcggataaaggctcaaacagaaattcacgcaat
tcccaattggatggcggctacgacaactgggagtcacggagcagcacggcccgggaccga
agcgtggagaggagcggcgccgagaggagctccgacagggcgtcagagcgcgagcgctat
gagagtgacaggcgagaccacgctagagactcctcctacgacaggaggggaggacatgga
gagcgggagcacagagacaaccgagagagaggttctccaaacagatatcagaggaggtcc
gaggagtctgagagggaggagaggaggacggaccgagcagaggacaggcgggacgacagg
ggtcgtgagagggaccgagacagggagcgggagagagacagggagcgggagaaagagaag
gaacgagagagggagagagagaaggaacgagagaaggagagggaggcggagagggaacgg
gccagggagcgagagagggagagggaaagagagcgggagagggagagagaaagagagagg
gaggaacgggagcgtgagagggagcgggaggagagggaaagggagagagagagggaggag
cgggagagggagagggaaagaaaggaaagggagagagagagggagcagagggaacgggag
agacagagggagtgggaggagcgggagagagggagggaggaaaggcgggagaggagagac
gacagcagggatgagaggacggttcgagacgaccgcaaaatcagccgtaagaggctccga
gtggagagcagtccgagccctcagcccctccctaagcggacgacgcgggacttcagcccg
gcagacagcgacggctacaatagcagtgaggacaaaagtgagcgcctgaccggccgaggg
cagcccaagctccacccacagcccctcctccccagccctgtgtgtccgcctccatctgac
aatggggataaacatcgcctgcctagccaagtggtgaggccccaggatcgcttgtcacgg
tcgcctcaacgtagcagcacttctagtgaaaagggcgcttactggaaagaagaagagcgc
aggggagccggggacaagcgggaagcccgcagccgcaatgacgacacggagacgcgtgca
gatcgagccaggggaggcgagagacgtggagagtacttcgcagacgtgtcctcagactct
cgcagcagaggtagagaccagcgagaatcgactccaccccctccgcctgcagcccttccc
gtcggcgctgaaagcagggaggccactggtcctccgccacacgaggaaagcaaaaagaag
acaaagacacagaagaagggtttgaagaaaggccgtaaagacgaggatgtcagtggggga
aacattttggtcccggcagcggagaggtttaatccggagcctcctgccagcacgtcttca
gatgttcctatccactcaccgaggaaaggagccaagaaaaagggacacgagcggaagagg
aagaggtcctcaggaggggagtctgatgtgtctcaggaggagacgtctgcccaacagcct
cagaacaagaggaagagaggtcctcggactccgccgccctccatgaggcctgatcgtcat
gggacaaacacagagcgctcccccgttttcaaatcaaacaatttcagcgattggtccgac
gaggaggagccggagcgggtgtgtccggcggaagtgcaggctcctccgcctcctgctgag
aggactccgtcagagcctctaaggagaggcggtggccacaggatgggtagagacagggac
cggggtcatgctcccactatagccccacttttatccccagaccccccgatgctgcttcaa
actctgacgccacagccgctcatgtcccagccgctcatgtcccagccgctgctccggaaa
ccgccaccggagcaggcgcgcagcagcagtatggggagcacccagagccggacatcatct
cgacgcccgcggtctccttccatcgagtcgccctgcctggaggaccctcagggtccacgc
atgcgccgcggcaggccgcagggctcccactcccgagaccgggaaagggaaagagagctg
gagcgcgagagggggatggtgggcgatcctcctgggggcgagaggaaatcccgaatcgat
cagctgcgcagaggagagcccagtcgcagcacctcgtccgaccgccaggattctcgtagc
cacagctccaggcgcagctccccggattcagagaggcagggcaggtccaggtcgcgggcc
ggctcctacgacagtagagagagggagagagaaagggagccttttgaacgggacagagag
cgagaacgtaaggatttccgcccccagcagaaccagcagccgcccctgcacctccaacag
ccaattcaaccgcagagagactgggagccggagccgagagactggcccagcagggggcgg
gagcccctcctgatgcgtcctgttcgggaacccctcctcagaggcgagagggacatcagg
gaacgggaacgcctgcttccagagggactcatccagcagcacgaacgcgagcgggacaga
gacagccggggggaccggggcatggatcgagagaggtccatgttggacctgcctccacat
gctgacccgagagcgccgggcagaggagacgcacgaggcgacataagaggtgacctgatg
aggcaggacaggagcgacttcgagccactgctcccaagagaagccttcagtccagcagaa
ccagaaaaatccagcaacagccatctccctggagatcagcgtgagctggagaaggctgaa
agcatcgatggcgatgatgatggaaaagaagacgagcagtctgttgcttctgtagcagag
gagtatgaacccatcagcgatgatgagctggatgaaatcctggccgacagccagaaaaag
gaggatcagcaggaggaggagaaaatcacaggtcccctggatgtgattgacgttgattgg
tccagcttgatgccaaaacagaagccggagcctcgagcggcgggggcggctctgctccgc
tttaccccaggcgctgtcctgttgagggcgggcatttccaagcgcctcgctggccctgaa
cttttagaacaagtcaaagaggtgtgcaagtcagagctggatgatcccaaagatgctgac
aagctgtttgagcatgaccttggagccctaaatatggctgccctgaataggcgagtggag
agggccggtctacttagcaacctcggaccctgctgcaaggccctctgtgctcggagggac
ttcgccatccgtcggcagctgttaaagaacgaaaaaggtcaaaccaagcagtaccccact
ccacctgtagtagaccaggagctgctccagatgagcatccgtctgttcagaaggaccatg
gccagtcagacctccgccccagagagggtagagagcggctcggcacccgcagccgaagct
gcagaaactgatagcagcaagctgagcacagcacaagaggtgtgcgtgtcctga
DBGET
integrated database retrieval system
