KEGG   Cyprinodon tularosa (White Sands pupfish): 119779365
Entry
119779365         CDS       T07496                                 
Name
(RefSeq) aly/REF export factor 2-like
  KO
K12881  THO complex subunit 4
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03013  Nucleocytoplasmic transport
ctul03015  mRNA surveillance pathway
ctul03040  Spliceosome
ctul05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119779365
  09122 Translation
   03013 Nucleocytoplasmic transport
    119779365
   03015 mRNA surveillance pathway
    119779365
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    119779365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctul03019]
    119779365
   03041 Spliceosome [BR:ctul03041]
    119779365
Messenger RNA biogenesis [BR:ctul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     119779365
    TREX complex
     119779365
Spliceosome [BR:ctul03041]
 Complex C
  Other components
   EJC/TREX
    119779365
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    119779365
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz FYTT
Other DBs
NCBI-GeneID: 119779365
NCBI-ProteinID: XP_038134926
LinkDB
Position
Unknown
AA seq 242 aa
MADKMSMSLDDIIKLNKIDGREGEGGRFRRGGSSGRAGGSSRPPMATRGRPNNFQRDRNN
RAAPYTRPRELPDKWQHDMFEETEGGRSERPERRVDNGSKLLISNLDFGVSDLDIKELFE
EFGPIKTASVHYDRSGRSKGMADVHFVNKADAIKAMKHYNGVPLDGLPMKIQQASSEVRP
QSSSRGFDRSRLGQPRFERRPGGSSGGFRGRGRGGDRRPQLSAEELDAQLDAYKSECRMD
TS
NT seq 729 nt   +upstreamnt  +downstreamnt
atggccgataagatgagcatgtctctggacgacattatcaagttgaacaagatagatggc
cgcgaaggagaaggagggcgcttcaggcggggaggaagttcaggtcgagccggtggatcg
tcgaggccgccgatggcaacgaggggcagaccgaacaacttccagcgtgataggaacaac
agagccgctccatacaccagacccagagagctgccagacaaatggcaacacgacatgttt
gaggaaactgaaggcggacgaagcgagagaccagaaagaagagtagacaacggcagcaag
cttctgatctctaatctggatttcggcgtctctgatttagatattaaggagctgtttgaa
gaatttggccccataaagactgcatccgtacactatgaccggtccggccgcagtaaagga
atggcagatgtccactttgtgaataaagctgatgccatcaaagccatgaagcattataac
ggtgttcctcttgatggtctccctatgaaaatccaacaagcatcgtcagaagttagacca
cagagttcaagcagaggttttgaccgaagcaggctcggtcagccacgatttgaaaggaga
ccaggtgggagcagtggaggtttccgaggtcgaggaaggggaggagatagaagaccccag
ctgtctgcagaggagctggacgctcagctggacgcttacaaatcagagtgtcggatggac
accagttaa

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