Cyprinodon tularosa (White Sands pupfish): 119779472
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Entry
119779472 CDS
T07496
Symbol
rpgrip1
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctul01009
]
119779472 (rpgrip1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ctul03037
]
119779472 (rpgrip1)
Protein phosphatases and associated proteins [BR:
ctul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119779472 (rpgrip1)
Cilium and associated proteins [BR:
ctul03037
]
Primary cilia and associated proteins
MKS complex
119779472 (rpgrip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
UPF0227
DUF1512
Motif
Other DBs
NCBI-GeneID:
119779472
NCBI-ProteinID:
XP_038135061
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MSPVVDETAGDLPVRDVGIMRGGLMPTFPDTLRDVKPWKKHHNSKMKADPQRLFRFPREH
LEDLCLRLQEENSLLRQHAQTQEQRLRRMSTKLMRLRQARPGSGPVKDRDMEEAIQELEA
RVAMLESQKEVLQNKLSMAKQHILDLGAHMPYRYSKGKNPEGEAGVRRAARTAPARYGLT
LEETRAEMERFRSSMTDQARMTELELTAQTLRDTLREREKEMEGTFRELRKQHADRHRTT
IRENVDLIRLQKQLSEKSTALRVSQEKFADLQEAYENQLEESQRALRESQGALLQKVEEL
TEQLKQERQKALTAEGQLNTTTLSLQNLDKLQERIIDLEGERDLIKESYDNLLKSTLSTQ
KPPDLQAETHREVQHDRLVENILAPDLHQRLEGMLREEREERKKLEVENEKLREEKDMLE
DQRQRDEELSVLMRERKEQLEQEVDQYREKVSALQDSLDSITKGFDMSVEDLSETLLQIK
AFRMEQESRESLGFLVPDGRMDDSSPELMKIQATHAEMVLELQKTRNLLLLEHKITRDLQ
EELNMINQKVEREREESRRRVAEKDKLLSKRALQINTLQAQLKELAYSPRNYKRTIPIQY
TWPAGDQEMVQPIEDDLCFSQLKSGESLLEIHLKGATFTPAGLRIMTSLHPGAGHQEDFV
TFCTYCLLDFEMHSTPLVSGSRPNYGFTSRYALTVRDLGRLGGQGSRVRLELHQALGGVQ
FVTHGSGSVSLMGAMEKRGERICGSVSITGNEGGVISVVDFWVRLYPPAEPIVTVEEVRA
ERRTVTQRGPVQIPLGWQDSGQEELHDYGGGIPNELVVMLERCVGLNARWPGLLPDAYLT
YRLYDLPPHVSQTVQCSVDPVFNDVSSFPLAVTTDILHYLRSSSLWVYVFDDSDEQIPPA
YLAKTPIPLRALATGREIRGDYVLRDPAGGPRGMVRVMLKWKYPFQPPVDGFKERWGMET
GEVDRIKSNKKEEERKAEASQRPTAKPRAKTRDLQHDKPVAVQKETEAGPQPRPVKQKSS
ADSQLGQIMAVKPLPADRKASSKRSREVRRSPLTPEPRVTTPPYKAPVGSSSRRSTAAPL
RGSSATDVGIQDLSSVSLFSEQKEEESDESNTPAEDSEAPESTASSSTQSDIIIIPPKRK
MRKGDKLRVEILSLTFEPSSQVVSDRSVQRVYVEYRLLGVAMETTETPMSLRKPVNGEEI
HYNFTRVIYVDGSHSAQLRQYLYTMLEGTDPNQGRLKFTVVSEPMDDEEECVDVGHAFLD
LQELLLTGNDVIEQQIDIVSVDEDQEVIGNLKVSLEAAKALNGIYQEFQQRGESKAAGNE
EEDDEEEDEKGEGEEEQQDNKKDQIQVLDYDDEDEDSAFH
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccggtggtggacgagacagccggggacctaccagttagagatgtggggataatg
agaggaggattgatgcccaccttcccagatacccttcgtgacgtgaaaccatggaagaag
catcacaattcaaagatgaaagcagaccctcagcggctgtttcgatttcccagagagcat
ctggaggacctgtgtctgcggctgcaggaggagaacagtttgctcagacaacacgcacag
acacaggagcagcgactccgcaggatgtccacaaagctgatgcgtcttcgtcaggcccgt
ccggggtctggtcctgtcaaggacagggacatggaggaagccatccaggaactggaggct
cgggtagcgatgttagagagtcaaaaggaggtgttgcagaataaactcagcatggccaag
cagcacatcctggacctcggggctcacatgccttacagatacagcaaaggtaaaaaccca
gagggggaggcaggagtcaggagggcagcacggactgctcctgcacgatacggcctcaca
ctggaagaaaccagagcagagatggaaagattcaggtccagtatgacggaccaggcgagg
atgacagaactggagctgacagctcagactctcagagacactctgagagagagagagaaa
gagatggagggaacattcagagagctgaggaagcaacatgctgacagacacagaacaact
atccgagaaaatgtggatctgattcgtctgcaaaagcagctctcagagaagagtacagcc
ctgagagtgagccaggagaagtttgcagacctgcaggaggcgtatgagaatcagctggag
gagagtcagagggcgctaagggaaagtcagggcgctctgttgcagaaagtggaggagctg
actgaacaactgaagcaggagagacaaaaagctctgacagctgagggacagctcaacacc
accactctgtctctgcagaatctggacaagcttcaagagaggatcatagacctggaggga
gagagggatctgattaaagaaagctatgataatctactaaagagtactttgtctacccag
aaacctcctgatctccaagctgaaacacacagagaggtgcagcatgacaggttggtggag
aacatccttgcaccagatctccaccagagactggagggaatgttgcgagaagagagggag
gagagaaaaaagctggaggtggaaaacgagaagctcagagaagagaaagacatgctggag
gatcagaggcagcgggacgaagagctatctgttctaatgagagagaggaaagagcagctg
gagcaagaggttgaccagtacagagaaaaggtctctgctcttcaggacagcctggattcc
atcactaaggggtttgatatgagcgttgaggatctcagcgaaactcttttacagatcaag
gccttcagaatggagcaggagagtagggagagcctgggtttcctcgtgcctgatggtagg
atggacgattcctcccctgagctgatgaaaatccaggcaacccatgcagagatggttctt
gagctgcagaaaaccagaaacctgctactgctggagcacaagatcaccagagatctgcag
gaagaattaaacatgattaaccagaaggtggaaagagagagggaggagagcaggaggagg
gtggcagagaaagacaaacttctatcaaaaagagctctgcagatcaacacattacaagcc
cagttgaaagaattggcctacagccccaggaattacaaacggaccatcccaatacagtac
acctggcctgcaggggatcaggagatggtccagcccattgaggatgatctatgcttttct
cagctcaaatctggggagtcactgctggagatacaccttaagggagccaccttcaccccg
gctgggctccgtatcatgaccagcctccacccgggagcaggacaccaggaggattttgta
accttctgcacctactgcctgttggactttgagatgcactccaccccgctggtgtcaggg
agcaggccaaactacggcttcacatcccgctacgcactgacagtccgggatctgggccgg
ttgggaggtcaagggtcgagagtgcggcttgagctccaccaggcgcttggaggagtccaa
ttcgtcacccatggaagtggcagcgtgtcactcatgggtgctatggagaagagaggagaa
cgaatctgtggcagtgttagtatcacaggaaatgaggggggagttatcagtgttgtggat
ttctgggtgcgcctctaccctcctgctgaacccatcgtcactgtggaagaggttagagct
gaaaggaggacagtgacacaaagaggtccggttcagatcccacttggctggcaagacagc
ggccaagaggagttacatgactatggtggcgggatccccaatgaactggtggtgatgctt
gagcgctgtgtgggcctcaacgctcgctggccgggactccttccagatgcctacctgacg
taccgtctgtatgacctgccgcctcatgtctcacaaacggtccagtgctcagttgatccg
gtgttcaacgacgtcagcagtttcccactggcggtaacaacagatatattgcactacctc
aggtctagcagtctgtgggtttatgtatttgatgacagcgatgagcagataccaccagcc
tacctggccaagacgcccatcccactgagagctctagcaacaggcagagagatcagaggt
gattacgttctcagagatcctgcaggtggacctcggggaatggtcagagtcatgctaaaa
tggaagtacccatttcagccaccggtggatggttttaaggagagatgggggatggagacg
ggcgaggtggacaggattaaaagcaataaaaaggaagaggaaagaaaggcggaagcatca
cagaggccgacggccaagccaagagcgaagactcgggatctccaacacgacaaaccagta
gctgtgcagaaagagacagaagctggacctcagcctcgacctgtcaaacagaagagctct
gcagattcacagttaggccaaattatggctgtaaaaccactgccagcagaccgcaaagct
tcctctaagaggtcccgtgaagtgagaagatctcccttaacccctgagccaagagtgaca
acaccaccctacaaagctccagtagggtcatcctccagacgatccactgccgctccatta
aggggaagttctgccaccgatgtagggattcaggacctttcatctgtgtcattgttcagt
gaacagaaggaagaagagtcggatgagagtaacactcctgcagaggacagtgaagcccct
gaatctacagcatccagttctacacaaagtgacataataatcataccaccaaaacgaaaa
atgaggaagggagacaagcttagagttgagatcctgtccctgacgtttgaaccatcctcc
caagtggtgtcagatcgctctgtgcaacgcgtttatgtggaataccgtctcctgggcgtt
gccatggagacgacagagactcccatgtctcttcgtaaacctgtgaacggggaagagatt
cactacaactttacacgagtgatttatgtggacgggtcccattcagctcaactaagacag
tatctttacactatgctggagggcacagaccccaaccagggcaggttaaagttcacagtg
gtcagtgagccgatggacgatgaagaggagtgtgtggatgtcggacacgcattcctagat
ctacaggaactgctgctcacaggaaacgatgtgattgaacaacaaattgacattgtcagt
gtggacgaagatcaggaggtgatagggaatctgaaagtgtccctggaggcggcaaaagca
cttaatgggatataccaggagtttcagcagagaggtgaaagtaaagcagcaggaaatgag
gaagaggatgacgaagaagaagatgaaaaaggagaaggagaggaagagcaacaggacaac
aagaaagatcagattcaagtacttgattatgacgatgaggatgaagacagtgcgttccac
taa
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