Cyprinodon tularosa (White Sands pupfish): 119779581
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Entry
119779581 CDS
T07496
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119779581 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119779581 (runx1)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
119779581 (runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
119779581
NCBI-ProteinID:
XP_038135181
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MGIFSLAEHGMAEVISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKIVTLGDVPDG
TLVTVMAGNDENYSAELRNATAVIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVA
TYQRAIKITVDGPREPRRHRQKLDEVKAGSLAFSERLTELEQLRRSSIRVTPPHNHHHQP
SANSHQSAVLTSATFSSPPHSGLTADSRQIQSSPSWSYDQSYPYLGQITTPAVHTAGPLS
PARSSLGELSSRLSGPDLAAFGDPRMALERPFSSLPSLPESRFSNTRVHYPPTGAAFTYT
PTHNPVSNGAISITMATAMASTQTGRYHTYLPPPYPANTPHQAQNGPFQSTSSPYHLYYS
TTTGSYQFSMMAGGGANSDSHSPPRIFPPCTTASTGSSLLHPSLPNQNEGVGVEVESSHS
SSPTNMAAAEAVWRPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggtatattcagtctggcggagcacggcatggctgaagtgatttcggatcatccgggc
gagctggtgaagacagacagccccaacttcctctgctcggtgctgcccacccactggagg
tgcaacaagaccctccccattgccttcaagattgtgaccctgggcgacgtccctgatggg
accctggtgacggtgatggcgggaaacgacgagaactactccgctgagcttcgtaacgcc
acggctgtcatcaagaaccaggtggctcgattcaacgacctgcgcttcgtcggccgcagc
gggagaggaaaaagtttcaccttgaccatcacagtgttcaccaaccctccccaagtcgcc
acctaccagcgggccatcaagataacggtggacggtcccagagagccacggcgtcaccgt
cagaagctggacgaggtcaaagcgggttcgttggctttctccgagaggctcaccgagctg
gaacagctgaggaggagctccatcagggtaacgcctcctcacaaccatcatcatcagccg
tctgcaaacagccaccagtccgccgttctcacttccgcaacgttttccagccccccacac
tccggactgacagctgattccagacagatccagtcttctccatcttggagctacgatcag
tcgtatccttacctcggccagatcactactccagctgttcacacagctggtccactttca
cctgctcgctcctctcttggtgagctttcctcaaggctttcaggtccggacctcgcggcc
tttggtgatccgcggatggctttggaacggccgttcagttccctcccctccctgcctgaa
tcccgtttctccaacactcgggtgcactaccctcctacaggagctgcattcacttacact
ccaacacacaacccggtctctaacggcgctatcagcatcaccatggccaccgccatggcg
tccacccaaacaggacggtaccacacctacctgcctccaccttaccctgccaacacccct
caccaagctcagaacgggccgttccagtccacttcgtccccctatcatctgtactactcc
accaccaccggctcgtaccagttctctatgatggccgggggaggggccaacagtgactcg
cactctccgcctcgtatcttcccgccttgcaccactgcctccacggggtcttctcttcta
cacccttctttgcccaatcagaacgaaggagtaggtgtggaggtggaatccagccacagt
agctcgccaacaaacatggctgcggctgaagccgtatggagaccgtactga
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