Cyprinodon tularosa (White Sands pupfish): 119779791
Help
Entry
119779791 CDS
T07496
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b
KO
K23619
collagen type XXVIII alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctul01002
]
119779791 (col28a1b)
Peptidases and inhibitors [BR:
ctul01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
119779791 (col28a1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
Baculo_LEF-11
Motif
Other DBs
NCBI-GeneID:
119779791
NCBI-ProteinID:
XP_038135506
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MDKKSLHLLQQLSVKMFLHRSLIRGLALWLLVLALTQDASGKRKKEAHRKNYKLRDDGGN
GVIFDRTTQAKGTKCSLEVVFILDSSESATAELFTEEKMFVLRFSTALSMLQVKGFSLKI
RLAALQYSSFVSIEQRFTNWKDLDSFQSKVNSMSYIGQGTFTTYAIKNATQMLLEETSKD
AVRIAVLMTDGVDHPRNPKVIPAARDAKSYGIKVFTIGLSNVAMQGESKEKLQAIASISP
GRFFHYLEDPQLEQKLIREMGAVALEECPPCVCEKGERGVPGLSGRKGDPGDEGPPGLKG
QKGEPGLNGQPGSDGSQGLPGFKGNKGNKGDCGPPGEKGEAGREGLPGLPGLKGEKGLIG
PVGDMGPEGPAGPKGDRGPVGERGPPGDFGIGRPGPKGERGFEGRPGPMGPTGKGDIGPP
GPPGPTGPQGKPGPQGEGFPGPKGDRGFEGPRGNRGPPGVGIKGDKGNHGLPGLQGPVGD
PGIGLPGEKGVQGPVGLPGSRGPPGIGIMGPKGDQGFPGAPGAPGERGVGAPGPKGDSGV
PGLSGLPGPPGEDGVPGQKGDVGLPGPRGPDGIPGRGLPGGKGDKGDRGSRGQSGPPGPM
GQMGPKGEPGNIGLPGSIGPPGRGIPGAKGDQGPQGPAGAVGEPGIGLPGPKGDRGPPGP
VGRPGLKGEGFFGPPGLPGPPGVPGEAGLDGIGLPGSKGDRGFPGPPGPAGPPGIGLIGH
KGSPGPIGPPGLPGLPGEGIEGQKGDPGFQGIPGPRGPPGQGLQGDKGDRGLRGEAGKKG
DRGLPGQPGDVGPVGRMGQKGEPGLTRSEIIELIRSICNCSKACHQKPLELVFVIDSSES
VGPQNFNVIKDFVNSVVDRTTVSPNATRVGVVLYSNSNLVVLSLEEEATGDEVKSEVRAM
TYLGEGTYTGSAIEKAFQVFEAARTDVRKVAIIITDGQTDMRDAVSLESAVTKAKDSNVE
MFVIGVVNNSDSNSKKFIEELNFIASDPDSDHMFLITDFDKLRALEMRLLPCVFEEGKAV
LFDPVTISKILLPGLPEDISNNDKLPFWVDGDTLTFPGEFRSVQIVPGFPESHFNGELVL
SQGPETGCNQSLDPGPCRDYIAKWYYDAKSNSCAQFWFGGCQGNQNRFDSEQKCRETCEK
F
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaatctctccacctgctgcaacagctcagtgtgaaaatgttcctgcacaga
agcctaatcagaggactggcgctttggcttctggtgttagcgctcacacaggatgcctca
ggcaagaggaaaaaggaggcacacaggaaaaactacaaactgcgtgatgatggagggaat
ggtgttatttttgacagaactacacaagctaaaggaactaaatgttctctggaagtggtt
ttcattctggacagctccgagagtgcaaccgctgagctatttacagaggagaagatgttt
gtgttgagatttagcacagcgctgtccatgctccaggtgaaaggcttttcgctgaagatt
cgactggctgcacttcagtacagcagctttgtttccatagagcagcggtttaccaactgg
aaagacctggactcattccagagcaaagttaactccatgagctacattggacaaggaacc
ttcaccacttatgccattaagaacgctacacagatgctgctggaagaaacatcgaaggac
gcagttaggattgcagtgctcatgactgatggagttgatcatccccgtaaccctaaagtg
atacccgctgctagagatgccaaaagctatgggatcaaggtcttcactatagggttgtcc
aatgtcgccatgcagggagagagtaaggagaagctccaggccatcgcgagcatatctcct
ggacgtttttttcattatctggaggaccctcaactggagcagaaactgatcagagagatg
ggggctgtagcacttgaagaatgcccaccgtgtgtctgtgaaaaaggagagagaggtgtt
ccaggcctttctggaaggaaaggagacccaggtgatgaaggaccacctggtctgaaagga
cagaagggtgagcctggattaaatggtcaacctggaagtgacggttcgcagggacttcca
ggttttaagggcaacaagggaaataaaggagactgtggtcctcctggagaaaagggtgaa
gctggacgtgagggacttccaggcctgccaggattgaaaggagagaagggtttaataggg
ccagtaggagacatgggtcctgagggcccagcaggacctaaaggggacagaggtcccgtt
ggtgaacgtggaccaccaggagactttgggattggacgtccaggacctaagggtgaaagg
ggctttgaaggaagaccaggtccaatgggtccaactgggaaaggagacattggaccacct
ggtccaccaggaccaactggaccccaaggaaagcctggaccccaaggagaaggatttcca
ggaccaaagggtgaccgaggatttgagggtccccgaggaaaccgtgggcctcctggtgtt
gggatcaaaggtgataagggtaatcatggacttccaggactccaaggtccagttggtgat
cctggaattggacttccaggggaaaagggagtccagggcccagttgggcttccagggtct
agaggacctccaggaattgggatcatggggccaaagggcgaccaaggcttccctggtgca
cctggagcaccgggggagagaggtgtgggagcaccgggaccgaagggtgattctggagtt
cctggtttatcagggttacctggtccaccaggggaggacggagtcccgggacaaaagggt
gatgtaggcttaccaggacccagaggacctgatgggattcctggtcgaggacttcctgga
gggaagggagacaaaggggaccgagggagcagaggccaatcaggtccaccgggcccaatg
gggcaaatgggtccaaagggggaacctggaaatattggacttccaggatcaattgggcct
ccaggcagggggattccaggtgccaagggagaccaaggtccacagggtccagctggagca
gttggtgagcctgggattggtttacctggacccaagggagatcgaggaccacccggtcct
gtcgggcgaccaggactgaaaggcgaaggtttctttggacccccaggacttcctggacct
cctggtgttccaggagaggctggactggatggaattggtttgcctggatccaagggggac
agagggtttccaggaccacctggtcctgctggacctccaggaattggtctgataggtcat
aagggttctccaggtccaattggaccccctggcctaccgggattacctggagaaggtata
gaaggacagaagggggaccctggatttcagggaattcctggacccagaggtcctccagga
caaggtctgcagggagacaagggagacagaggactcagaggtgaggctgggaaaaaagga
gacagaggactgccaggacagccaggagatgttggccctgtgggccgaatgggacagaaa
ggagagccgggattaacaaggagtgagatcatagaattaatcaggtccatatgcaactgc
agcaaagcctgtcaccaaaaaccgctagaactggtgtttgtgatcgacagctcagagagc
gtgggccctcagaactttaatgtgatcaaagactttgtgaactcggtggtggatcgcacc
acggtcagccccaatgccacgcgggtcggcgttgtcctctacagcaacagtaatttagtt
gtgctcagccttgaggaggaagccacaggagatgaggtcaaatctgaagtccgtgccatg
acctacctgggtgagggcacctacaccggcagtgctattgaaaaagccttccaggtgttt
gaagcggcacggacagatgtgaggaaggtggctatcatcatcaccgatggacagaccgat
atgagagatgctgtcagcttggagagtgctgtgacaaaggctaaagacagtaatgttgag
atgtttgtaattggagtggtgaacaatagtgactctaactccaagaagtttattgaggag
ctcaacttcattgcctcagatcctgacagcgatcacatgttcctgatcacagacttcgat
aagcttcgagctctagaaatgagactcctgccttgcgtctttgaagagggaaaggctgtg
ttgtttgacccagtaacaatcagcaagatacttcttcctgggctcccagaagacatcagt
aacaatgataaacttccattttgggtggatggagacactctgaccttcccaggagagttc
aggagtgttcaaatagtgccaggatttccagaatcccatttcaacggtgagttggtcctt
tcacagggaccggaaacaggctgcaatcagtccctggatccaggcccatgtcgggactac
atcgcaaagtggtactatgatgccaagtcgaactcctgcgcccagttctggtttggaggc
tgtcaaggaaaccaaaaccgctttgattcagagcagaaatgtagagagacttgtgaaaag
ttctaa
DBGET
integrated database retrieval system
