Cyprinodon tularosa (White Sands pupfish): 119779874
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Entry
119779874 CDS
T07496
Name
(RefSeq) transcription factor SOX-13-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119779874
Transcription factors [BR:
ctul03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119779874
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GDE_N
Motif
Other DBs
NCBI-GeneID:
119779874
NCBI-ProteinID:
XP_038135643
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All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MTCVSRTVPGSERFWIPALPAGPTRMVEPSPSALHLLSSGDAHMAEIGVKVEQEECNGGG
GAKTSSERPGTLQEWSANQSLEARQLTPPLSRSPSEGSPGKELPHKQSPLGGKEAGIHEQ
SEAQSKIKEGTPESLAEKELQLLMMINQLSGLREQLLNAHSEQRNMAALLLEKQQQQMEV
ARRQQEEIAKQQELLIKQQRTINQLQQQIQQVNMPFLMIPAFHPNSQPLPVTSESQMTYP
VQPIPCKPAVDYPIQLLQSSHPASIKRSTTSFRQEASQPLNLTSKPKGMEVGKTSSPQSL
ELGSLALQGGYRFRDLHREASHSPPRPTLSFLGEGDVVTQAIHDAQQLLRSHSRGEKVRD
GAVKMEYKSSPRTEKMTHCEREERHGLQSTEDHLSSDSEGDLPATVQGSYAETRPTSSTG
HIKRPMNAFMVWAKDERRRILQAYPDMHNSSISKILGTRWKAMSNQEKQPYYEEQARLSR
QHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRRQEQRGSYAHSQTEPQQIHYSQ
SDGQYPAGGSISVPGLPFHPALLEHYLPQVPPPGRRPEGRATPTPQPRDRERKRERERSP
YSEGEESDAGERSEGELVLLTD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacttgtgtcagcagaactgttccaggcagtgagcgattttggattcctgcacttcca
gccggcccgaccagaatggttgagcccagcccttcagctctgcacctcctctccagtggg
gatgcacacatggcagaaatcggtgttaaagtcgaacaggaggaatgcaacggaggaggc
ggagccaaaaccagttcagagcgcccggggactttgcaggagtggtcagccaaccagtct
ctagaggcgcgtcaactgaccccaccgctgtcacgctccccttcagagggctccccagga
aaggagttaccccacaagcagagccccttgggagggaaggaagctgggattcatgagcaa
tcagaggcccaatcaaaaatcaaggaaggaacccctgagtctctggcggagaaggagctc
cagctgttgatgatgataaaccagctgagcggcctgagagagcagctgctcaacgcccat
tcagaacagaggaacatggctgccctgctgctggagaagcagcagcagcagatggaggtg
gcccggcggcagcaggaagagatcgccaagcagcaggagctgctcatcaagcagcagcga
accatcaaccagcttcagcagcagatccagcaggtgaacatgcccttcctgatgatccca
gctttccacccaaactcccagccgctccctgtcacctctgaatctcagatgacatatccg
gtgcagccgatcccctgcaagcccgcggtggactatcccatccagctgctgcagagcagt
caccccgcctccatcaagaggagcaccacctccttccggcaggaggccagccagcctttg
aacctgacctccaagcctaaggggatggaagtggggaagacatccagcccacagagcctg
gagctgggatcactggcgctgcaggggggctacagattcagagatctccacagagaggcg
tcccacagccccccacggcccaccctcagtttcctgggagaaggcgacgtggtcactcag
gccatccacgatgcccagcagctgctgaggagtcacagcaggggggagaaggtgcgggac
ggggccgtgaaaatggaatataaaagttctcctcgtacagagaaaatgactcactgtgag
cgagaagaaagacacggcctgcagagcacggaggaccacctcagcagcgactcagagggc
gacctccccgccacggtccagggaagctacgccgagacccggcccacttcctccaccggc
cacatcaagagacccatgaacgccttcatggtgtgggccaaggacgagcgcaggaggatc
ctccaggcttacccagacatgcacaactcctccatcagcaagatcctgggcaccaggtgg
aaggccatgtccaaccaggagaagcagccgtactatgaggagcaggccaggctgagcagg
cagcatctggagcgttaccccgactacaagtacaaaccgcggcccaaacggacctgcatc
gtagagggccgaaggctgagggtgggcgagtacaaggccatgatgaagagccgccgacag
gagcagagaggctcctacgcacacagtcaaaccgagccgcagcagatccattactcccaa
agcgacggccagtatccagccggcggctccatctccgtcccaggcttgccatttcacccc
gcgctgctggagcactacctgccgcaggtcccgccccctggccgcaggcccgagggccgg
gccacgcccaccccgcagcccagagacagagagaggaaacgagagagggagcgttccccc
tacagcgaaggagaggaaagcgacgcgggagagaggagcgaaggggagctagtgctcctc
acagactga
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