KEGG   Cyprinodon tularosa (White Sands pupfish): 119780028
Entry
119780028         CDS       T07496                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
ctul  Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ctul00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119780028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctul03019]
    119780028
   03036 Chromosome and associated proteins [BR:ctul03036]
    119780028
Messenger RNA biogenesis [BR:ctul03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     119780028
Chromosome and associated proteins [BR:ctul03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     119780028
    COMPASS/SET1 complex (yeast)
     119780028
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_EML WD40_RFWD3 Beta-prop_SPT8 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD_LRWD1
Other DBs
NCBI-GeneID: 119780028
NCBI-ProteinID: XP_038135833
LinkDB
Position
Unknown
AA seq 315 aa
MKISDSLLRSFKVARIHRYHSEKVNCVHYSANGEHAVSSGNDDCIVLYDIQEGKPSRTLY
SKKYGVDLIRFTHGEAKNVVFSSNKLDDTIRYLSLTDNKFIRYFPGHSARVTALSMSPVD
ETFISSSLDKTIRIWDLRSPDCQGLTDPLGKPVCSFDPDGLVFAAGVESQAIKLYDIRAF
DKGPFACFETRLNRTCDWTGLKFSNDGKLILICTNGGAVRILNAFSGSVLHTFSGYNNSK
GISLEASFTPDSKFVMIGSEDGRVHVWSTESGMKVAVLDGKHPGPINGLQFNPRYMTFAS
ACTNMSFWLPCIDDL
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagatctcagacagcctcctgaggagttttaaagtcgccagaatccaccgatatcat
tcagaaaaagtaaattgtgtccactacagcgccaatggtgaacacgccgtttcaagtggc
aacgacgactgtattgttttatatgacatccaggagggaaaaccgtccaggactctgtac
agcaagaagtatggagtagatctgatccgcttcacacacggggaggccaagaatgtggtc
ttcagctccaacaaattggatgatacaattagatatctgtcgcttactgacaacaagttt
atccgatatttccccggtcactctgcaagggtaactgcactatccatgtctccggtggat
gagacattcatctccagctctttggataagactatccgcatctgggatctgcgttccccc
gattgccaaggtttgactgaccctctggggaaacctgtgtgctcctttgacccagatgga
ctggtatttgcagcaggagtggaatcccaggctatcaaactgtacgacatccgtgctttt
gacaagggtccctttgcatgttttgagaccagattaaatcggacctgcgactggactgga
ctgaaattcagtaacgatggaaagcttattcttatttgcaccaatggaggtgctgtccgc
atcctgaacgcctttagtggatcagtgctgcacactttttcaggttataacaacagtaaa
ggcatctccctggaggcctccttcacaccagactcaaagtttgtcatgattggttcagag
gatggacgagttcatgtttggagtactgaaagtgggatgaaggtggccgtgctggatggc
aaacacccaggacctatcaacggtctacagtttaaccccagatacatgacatttgccagc
gcatgcacaaacatgtctttctggctgccgtgtattgatgacttatag

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