Cyprinodon tularosa (White Sands pupfish): 119780403
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Entry
119780403 CDS
T07496
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctul03016
]
119780403 (pus7)
Enzymes [BR:
ctul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
119780403 (pus7)
Transfer RNA biogenesis [BR:
ctul03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119780403 (pus7)
Prokaryotic type
119780403 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
119780403
NCBI-ProteinID:
XP_038136369
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MHVRGSQFLISFRPLLYINSNRVKLTAIKKSLQATVWWKIRGVIHFLSLRPPLHPQPFKH
LALMAESEPVSNPTPVGEKRSCLQEGDGETPTKRPKVECDGEDGNGPIPEDGGEEAPEGE
ASDGEEDGESFADMMKHGLTEKDVGILKYISDHEGFSGILKERYSDFVVHEINKQGKQVH
LDDLSIPTDNKEEAETKQPDVCEVLTEEQKQQLGELQLFKNKEGNVSIEILDDTKEKRTL
IHKAIKTHYPGLETKTEEKEGRKFIVAYHAAGKKALAEVKATTAPRKHFWPQNRGVFCHF
VLYKENKDTMDAINLLSKFLRLRPNMFSYMGTKDKRAITVQEIAVLKITAERLAHLNKCL
MNLKLGNFCYKNHPLKLGELQGNHFTVVIRNISGTDEQVHQAMTSLKQTGFINYYGMQRF
GTTAVATQQVGRAILRNDWNQVVDLILKPRPGAEKEYLVRCREEWAKTQDPEAALRKLPN
KRCVEGQLLRGLSMYGKKNIVTAFGQIPRNNRLMYIHSYQSVVWNTMVSRRIEAFGLKAV
EGDLVLKGTKAHVLSAEEAERHSINDIVMPLPGYDVIYPSHHIGDGYRELLSADGLDIDN
MRHKVKDYSLAGAYRRIIITPTDVSWEVIHYDDPRISLVHSDFEKLENKPAPVFNKEGKY
RALKMEFSLPPSTYATMAIREVLKLDTSIKKQTQLNTVWFN
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtgcgggggtcgcagtttttgatatcgttccgtcctttgctgtatattaactca
aacagggtcaagctcacggctattaagaagtctctgcaggcgactgtttggtggaagata
agaggtgtaatccactttctttccctccgtcctccgcttcatcctcagccttttaaacac
ttggctctgatggctgagtcagagcccgtgtcaaaccccaccccggttggagagaagaga
agctgcctgcaggaaggggacggagagacgccaacgaagaggccaaaagtagagtgtgat
ggtgaagatgggaatggtcccattccagaagatggaggtgaggaggcgccggaaggagag
gcgagtgatggagaggaagatggagagagctttgctgacatgatgaagcacggcctgact
gagaaggatgtcggcatcctgaagtacatcagtgatcatgagggtttctctggaatcctg
aaggaaaggtattctgattttgttgtgcatgaaatcaacaaacaaggaaagcaagtgcat
ttagacgatctctccatcccaacagacaataaggaagaagcagaaactaaacaaccagat
gtttgtgaagttctgactgaggagcagaaacagcagcttggtgagctgcagctttttaag
aataaagaaggcaatgtctcgatcgagatcctagatgacacaaaggagaaaagaacactt
atccataaggccatcaaaactcattatcctggtctggaaacaaagactgaagagaaggaa
ggtcggaagttcatagtggcttaccatgctgcagggaagaaggctttagcagaggtcaaa
gcaacaacagctccaaggaagcacttttggcctcaaaaccgaggcgtcttctgccatttt
gttctttacaaggagaacaaagacaccatggatgcaatcaatttgctctcaaagttcctc
aggcttagacccaatatgttctcatatatgggtaccaaggacaagagggccatcacggta
caggaaatcgcagtgctcaagatcactgcagagagattggctcacctgaacaagtgtctc
atgaacctgaagcttggaaacttctgctataaaaatcatcctctgaagcttggggagctg
cagggaaaccacttcactgtggttatcaggaatatctctggaacagatgagcaggtccat
caggccatgacgtccctcaagcagactggcttcatcaactactatggaatgcagcgcttt
ggcaccaccgccgtggccacgcagcaagtaggcagggctatactaagaaacgactggaat
caagtggtggatttgattctgaagccccggcctggagcagaaaaagaatatctggttcgc
tgcagggaggagtgggcaaagactcaggaccccgaggctgcactgaggaagctgccaaac
aagcgatgcgttgagggacagctgcttcgaggcctgtcaatgtatggcaagaaaaacatt
gtcactgcttttggacagatccccagaaacaaccggctgatgtacattcacagctaccaa
agcgtggtgtggaacactatggttagccgcaggatcgaagctttcgggctcaaggcggtg
gagggggatctagttctcaaaggaaccaaagcacacgtcctttctgcagaagaagccgag
agacactccatcaatgatattgtgatgccacttcctggttatgatgtcatctacccctcc
caccatattggtgacggatacagagagctgctctctgcagacggcctggatatcgacaac
atgaggcacaaagtgaaggactactctctggcaggagcctacaggcgcatcatcatcaca
cccactgatgtcagctgggaggtgattcactatgacgacccccggatctctttagtgcac
agtgactttgagaaattggagaataaacctgctcctgtcttcaacaaagaggggaagtat
cgtgctctgaagatggagttctccctgcctccctcgacctacgctaccatggcgatcaga
gaggtgctcaagctggacaccagcatcaagaaacagacacaactcaacacagtttggttt
aactga
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