Cyprinodon tularosa (White Sands pupfish): 119780444
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Entry
119780444 CDS
T07496
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119780444 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctul03019
]
119780444 (myo5b)
04131 Membrane trafficking [BR:
ctul04131
]
119780444 (myo5b)
03029 Mitochondrial biogenesis [BR:
ctul03029
]
119780444 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctul04812
]
119780444 (myo5b)
Messenger RNA biogenesis [BR:
ctul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119780444 (myo5b)
mRNA cycle factors
P-body specific factors
119780444 (myo5b)
Membrane trafficking [BR:
ctul04131
]
Others
Actin-binding proteins
Myosins
119780444 (myo5b)
Mitochondrial biogenesis [BR:
ctul03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119780444 (myo5b)
Cytoskeleton proteins [BR:
ctul04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119780444 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Myosin_N
nSTAND3
Ac76
Motif
Other DBs
NCBI-GeneID:
119780444
NCBI-ProteinID:
XP_038136431
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MASDYNPYCQFTRVWIPDQDDVWKAAEITKDYKEGEPVLHLQLEDGTPLEYQVGPKSNAL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNNIYTYCGIVLVAINPYEQLQIY
GEEVITAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSSSDANVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIVFSRHYHIIGANM
RTYLLEKSRVVFQAEEERNYHIFYQLCASATLPEFKELGLTSAEDFTYTSLGENIFIEGV
NDAEDLKRTREAFTLLGIKESNQSGIFKILASILHLGNVEIISERDGESCHVGRNDVHLE
HFCRLLGVELKQMDHWLCHRKLATASETYVKTMSCKQANNARDALAKHIYARLFDWIVEH
INKALQTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHSGSAHFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFQEKDDLP
SSKSSKVNVRSLKTVPKVPNKEHRKTVGHQFRSSLHLLMDTLNATTPHYVRCIKPNDFKE
AFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMRKSDLSSADKKQVC
KNLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRTDKFRSACIKIQKTVRGWLQRIRYR
KIRRAALELQRYGRGYLARRYAEFLRQNRAALICQKQYRMVRERRKFLRIRRAAMTIQAY
TRGMFTRRIYWEFLLHHKAMIIQKHVRGWLQRKKFLRARNAAIVIQCGFRRMQAKRLLKQ
RKIEARSAQHLKKLNTGMENKIVQLTRKMDEQSKELKTQNEQLLTVNASLGSEVTKLQKE
LELVRNQQPDGGKVMSLQEEVEKLREELQEAHTQRKKMEEEHGSEKLSLTQRVEELEREN
SLLKTEKEEMNRRIQQQAKNSAEDLSSSSLETELDQERERYQNLLKEFSRLEMRYENLKE
EVSLSKFHPGHRRTTSDQISLESDSNYPSVSTSEVGDTEDSIQLVDEMGVEKAAMDISLF
MKLQKRVRELETERKRLQVNLDKMEEIAKRKGSEAKSPTSDVETADLAYNNLKRQELESE
NKKLKNDLNDLRKTISERASQDSSSNELQDSYNLLLSQLRAANEELDARKEEVLILRTQI
VSNVQLQEQSERIESEVDGGLNNSKEPMDKEEALKAYHGLCESKNNLQDWCLLNEDGELG
LAYQGLKQVARLLEAQLQTQTRQHRDELEALHTQIELLKDDIEKKQELLNYTSSLSPEAK
VEYSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELAAAQAAAQSGSSK
GELTRQVTLQRKEKDFEGMLEYMKEDEVLLIKTLITDIRPSSVAATVPCLPAYILFMCIR
HADYVNDDQKVESLLTSTINAIKKVLKRNNDDFEMMSFWLANSSRLLHCLKQYSGEEAFM
TQNTPKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSL
AGVKPMGYRNRSSSMDTDADGPTTYTLQGLIRQLSQFNSIMRDQGLDPEIVGQVFRQLFH
CINAVTLNNLLLRKDVCSWSAGMQLRYNTSQLEEWLRANNLFQSKASATLEPIIQAAQLL
QVKKKTSQDAEAICSLCTALTVQQIVKILNLYTPLNEFEERVTVSFIRNIQSNLQERNDP
PQLLMDTKHTFPVLFPYAPSALNLETMHIPASLGLDFLIRV
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgattataacccctactgtcagttcacgcgggtctggatcccggaccaggat
gacgtgtggaaagcggctgagatcaccaaagactacaaagagggagaaccggtcctccac
ctgcagctggaggatggaacgcccctggagtaccaggtgggtccgaaatccaacgcgctg
ccgttcctgaggaaccccgacatcctggtgggagagaacgacctgacggcgctcagttac
cttcatgaacccgccgtgctgcacaacctgagggtccggttcctggagtccaacaacatc
tacacctactgtggtatcgtcctggtggccatcaacccgtacgaacagctgcagatctat
ggagaggaggtgatcaccgcctacagcggtcagaacatgggagacatggaccctcacatc
ttcgccgtggccgaggaggcgtacaaacagatggccagagacgagaagaatcagtcgatc
atcgttagcggagaatccggagcaggaaagacggtttcggccaagtatgccatgaggtac
tttgccacggtgggcggctcctccagcgacgccaacgttgaggagaaggtcctggcctca
aatccaatcatggaggccattgggaacgccaagaccaccaggaacgacaacagcagccgc
tttgggaagtacatccagatcgtgttcagcaggcattaccacatcatcggagccaacatg
aggacctacctgctggagaagtcccgcgtcgtcttccaggcagaagaagagcggaactat
cacatcttctaccagctgtgcgcctcggccactttacccgagtttaaggagctcggcctc
acgagtgcagaggacttcacctatacctctttaggggagaacatcttcattgaaggagta
aatgatgctgaggaccttaaacggaccagagaggccttcaccctactgggtataaaggag
agcaatcagagcggcatctttaagatcttggcctccatccttcacctggggaatgtggag
atcatctctgagcgtgacggagagtcctgccacgtcggtaggaacgacgtccacctggag
cacttctgcagacttctgggcgtggagctgaagcagatggaccactggctgtgccacagg
aagctggccaccgcctcggagacctatgtgaagaccatgtcgtgcaaacaggcgaacaat
gcgcgtgacgctctggccaagcacatctatgcccgcctcttcgactggatcgtggagcac
atcaacaaggcgctgcagacgtcctccaagcagcactccttcatcggcgtcctggacatc
tacggcttcgagaccttcgaggtcaacagcttcgagcagttctgcatcaactacgccaac
gagaagctccaacagcagttcaactctcacgtcttcaagctggagcaggaggagtacatg
aaggagcagatcccctggaccctcatcgacttctacgacaaccagccctgcatcgacctg
atcgaggccaggcttggcatcctggacctgctggacgaggagtgcaaggttccaaaggga
acggatcagaactgggcccagaagctctacaagcagcactctggcagcgcacacttccag
aaacccagaatgtccaacacgtccttcatcatcatccacttcgccgacaaggtggagtat
cagtgtgaaggtttcctggagaagaacagagacaccgtctatgaggagcagatcaacatc
ctgaaggccagccagttccaactggttgctgacctgttccaagagaaggatgaccttccc
tcctccaaatcctccaaggtcaacgtccgctccctgaaaaccgtccccaaggttcccaac
aaggagcacagaaagactgtgggacatcagttccgctcgtcgctgcatctcctaatggac
actctgaacgccacaacgcctcactacgtccgctgcatcaaacccaacgacttcaaggag
gccttctcgttcgactcgcggcgggccgtccagcagctccgagcctgcggagttctggag
acgatccggatcagcgccgccgggtatccgtccaggtggacctacccggacttcttcagc
aggtaccgggttctgatgaggaagtcggacctcagctccgccgataagaaacaggtttgc
aagaacctgctggagacgctgataaaggaaccggacatgttccagtttggaaagacgaag
atcttcttccgggccggtcaggtggcctacctggagaagctccggaccgacaagttccgc
tcggcctgcatcaagatccagaagacggtccgaggctggctgcagaggatccggtaccgg
aagatccgcagagccgccctggagctgcagagatacggccggggatacctggcccgcagg
tatgcggagttcctgcgtcagaaccgggccgccctaatctgtcagaaacagtaccgcatg
gtccgagagaggaggaagttcctgaggatccgacgggccgccatgaccatccaggcctac
accagagggatgttcacccgcaggatctactgggagttcctgctgcaccacaaggccatg
atcatccagaagcacgtccgcggctggctgcagaggaagaagttcctgcgggcgcgcaac
gccgccatcgtcatccagtgcggcttcagaaggatgcaggccaagcggctcctgaagcag
cggaagatcgaagcgcgctccgcacagcatctgaagaagctcaacacagggatggagaac
aagatcgtccagctgacgaggaagatggacgagcagtccaaggagctgaagacgcagaac
gagcagctgctgacggtgaacgcctccctgggctcagaggtcactaagctgcagaaggag
ctggagttggtccggaaccagcagcccgacggaggcaaggtgatgtcactacaggaggag
gtggagaagctgagggaggagctgcaggaggcgcacacccagaggaagaaaatggaggag
gagcacggcagtgagaagctgagcctcactcagcgggtggaggagctggagagggagaac
tccctgctgaagactgagaaggaggaaatgaaccgacggatccagcagcaggccaagaac
tctgcagaggacctgagcagctcgtccctggagacggagctggaccaggagcgagaacgc
taccagaacctcctgaaagagttctccaggctggaaatgagatatgagaacctgaaggag
gaggtgtccctgagcaagttccaccccggccaccgcaggaccacgtctgaccagatcagc
ctggagtccgactccaactacccgtctgtctccacctccgaggtgggagacaccgaggac
tccatccagctggtggacgagatgggggtggagaaggcggcgatggacatcagtctgttc
atgaagctgcagaaacgagtcagagagctggagacggagaggaagaggctgcaggtcaac
ctggacaagatggaggagatcgccaagcgtaagggttctgaggccaagagcccaacttct
gacgtggaaactgcagatctggcctacaacaacctgaagagacaggagctggaatcggaa
aacaagaagctaaagaacgacctgaacgacctgaggaagaccatctctgagcgagcatcg
caggacagctcgtccaatgagctgcaggacagctacaacctgctgctcagtcagctgagg
gcagccaacgaggagctcgacgcccgtaaggaagaggtccttatcctgaggacgcagatc
gtgagcaacgtccagctgcaggagcagagcgaacgcatcgaaagtgaggttgatggagga
ctgaacaacagcaaagagccaatggacaaagaggaggccctcaaagcgtaccatggactg
tgtgagtccaagaataacctgcaggactggtgtctgctgaacgaggacggggagctgggt
ctggcctaccagggtctgaaacaagtagccaggctcctggaggcccagctgcagacccag
acccggcagcaccgggacgagctggaggctctgcacacccagatcgagctgctgaaggac
gacatcgagaaaaagcaggagctcctcaactacacctcgtctctgtccccggaggccaag
gtggagtacagcgtccagcaggagatcactcggctcaccaacgataacctggacctcaag
gagctggtggagaaactggagaagaacgagaggaagctaaagaagcagctgaggatctac
atgaagaaggtccaggagctggcagcagctcaggctgcggctcagagcggcagcagcaag
ggggagctgacccggcaggtgaccctgcagaggaaggagaaggactttgaggggatgctg
gagtacatgaaggaggacgaggtgctgctcatcaagacgctcatcacagacatccggccc
agctcggtggcggccaccgtcccctgcctgcccgcctacatcctcttcatgtgcatccgc
cacgccgactacgtcaacgacgaccagaaggtggagtctctgctcacctccaccatcaac
gccatcaagaaggtcctgaagagaaacaacgacgactttgagatgatgtccttctggttg
gccaacagcagccggctgctgcactgcctgaagcagtacagcggggaggaggccttcatg
acgcagaacacgcccaaacagaacgagcactgcctgaagaacttcgacctggccgagtac
cggcaggtcctgagcgacctctccatccagatctaccagcagctcatcaaggtggccgag
ggcatcatccagcccatgatcgtgtcggccatgttggagagcgagagcatccccagcctg
gcaggagtcaagcccatgggctaccggaaccgctcgtccagcatggacacggacgcggac
gggccgaccacctacaccctgcagggtctgatccggcagctcagccagttcaacagcatc
atgagggaccagggtctggacccggagatcgtgggccaggtgttccggcagctcttccac
tgcatcaacgccgtcaccctcaacaacctgctgctgcgcaaagacgtctgctcctggagc
gccggcatgcagctcaggtataacaccagtcagctggaggagtggctgcgagcgaacaac
ctgttccagagcaaagcttctgccacgctggagcccatcatccaggcggctcaactgctg
caggtcaagaagaagacttcccaggacgctgaggccatctgctcactgtgcaccgcgctc
accgtgcaacagatcgtgaagatcctgaacctctacacgcctctgaatgagtttgaggag
cgcgtcaccgtgtccttcatcaggaacattcagagtaacctccaggagaggaacgaccct
ccccagctcctgatggacaccaagcacactttccccgtcctcttcccctacgccccctct
gctctgaacctggagaccatgcacatccccgcctcgctcggcctggacttcctcatcagg
gtgtga
DBGET
integrated database retrieval system
