Cyprinodon tularosa (White Sands pupfish): 119780613
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Entry
119780613 CDS
T07496
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04010
MAPK signaling pathway
ctul04020
Calcium signaling pathway
ctul04144
Endocytosis
ctul04510
Focal adhesion
ctul04540
Gap junction
ctul04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119780613 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ctul01001
]
119780613 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ctul04090
]
119780613 (pdgfra)
Enzymes [BR:
ctul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
119780613 (pdgfra)
Protein kinases [BR:
ctul01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
119780613 (pdgfra)
CD molecules [BR:
ctul04090
]
Proteins
119780613 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
Ig_5
C2-set_2
Motif
Other DBs
NCBI-GeneID:
119780613
NCBI-ProteinID:
XP_038136621
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MDGMKIYLVCGVICVGMVSAMADLFSSMGMEEPTRELEPNSLINVSCSADSEIVWDAPVL
KDAIITSDGFTSTLLIYNATVNHTGYYECKYGSEQTDIYIYVKDPSILFVPDGPEDWVDE
GDDGLVACRTSQLTYHVELIKIPSKEKIPGFYDPRMGFIGVSPGKYQCEATLDGRTFTSA
IYTVREKKPSEANDFEIKVSASEETIRVGQPLNISCIIPLGPSFHQQWIYLKTQAVNAFR
TELTLTDKVIHTLSIPQATVKDGGSYECSVRNEASGKAKAGRVAVTVFEDNSFLTLDPRG
ILQTEFVTIFEETQFTIYINAYPTPKVSWMKDDQALTEDFYIFTKMSRIEGNRYQSTITF
RVPMEKDNGNYTITAISGTQTAHFSFILKMTATRLDIRPSSAPLLQPDLEEMVVPLHSSF
TLTCRGGTKLVWDTPFHREEQSQVDRGVFVSTITVDIATLMHTGYYTCQYSGNITEEAEA
SSIYIYVPDPDSPFLPAYIYHLPPERSDVEIPCRVSDPGAIVTLVNVDTNQPVPCMYDSK
QGALGTFSAGTYVCKAIINGEVHTSEEYIVQDSIDMLQVKLYAERTALLVGETITVNCLA
QGPYLLEDNWKYPGKLANRGTKTVRESRKDREILYTLTIPHASTKDSGNYSCSITTVASR
ETQTKEIAIQVFAGEFLTINPDFQHHESARLDEVRELSATISSFPDAHVTWFKDGIPLND
VTAEFSTNLQKTSETSYRSVLTLIRVREEDSGNYTLRVENGNQSHEVSLHLVVKVPAVIV
DLMDLHHGSATGQSAVCITRGQPTPVVEWFICKNIKQCANDTSSWAPLPTNSTEITMESH
LDEKSNLEAQVMFGHLESTLSVRCFTKNELGVDSREIKLVSTGPHPELTVAAAVLVLLVI
VIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQLPYDSRWEFPRDRLVLGR
ILGSGAFGKVVEGTAYGLSCSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNI
VNLLGACTKSGPIYIITEYCFHGDLVNYLHKNRESFLSLSPEKNKKELDIFGINPADENS
RSYVILSFESRGDYMDMKQADNTQYVPMLEMSTNSKYTDIHGPNYDHPPSQKGSGESEMD
NLLSDDTSEGLTTTDLLSFTYQVAKGMEFLASKNCVHRDLAARNVLLSQGKIVKICDFGL
ARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTSLSDVWSYGILLWEIFTLGGTPYPGM
VVDSSFYNKIKSGYRMSKPEHAPQDVYEMMMKCWNSEPEKRPSFMGLSENMASLLPSSYK
RHYEKVNLEFLKSDHPAVTRVCMETDSGYVDIPYKNQGKLKDRESGFDEQRLSSDSGYII
PLPDLDPISDDEYGKRNRHSSQTSEESAIETGSSSSTYAKREGESLEDITLLDEMCLDCN
DLVEDSFL
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatgaagatatacctggtgtgtggtgttatctgtgtgggaatggtctcagcg
atggctgatctgttctcatccatggggatggaagaaccaacccgtgagctggagcctaat
tccctcatcaacgtcagctgctcggctgactcggaaatagtttgggatgcaccagttctg
aaagatgccataattacttctgacggtttcacctcaactctcctaatttacaacgctact
gtaaatcacactggctattatgaatgcaaatatgggagcgaacagacggatatctatata
tatgtcaaagatccttccatcctgtttgtcccagatggaccagaagactgggttgatgag
ggggatgatggtctcgttgcgtgccgtacatcacagctgacatatcatgttgaactgata
aaaatccccagtaaagagaaaatcccgggattttatgaccccagaatggggtttataggt
gtatctcctggcaagtatcagtgtgaagccacattagatggccggactttcacaagtgcc
atctacaccgtaagagaaaagaaacccagtgaggcgaatgactttgaaataaaggtcagt
gctagtgaagagacgataagagttgggcagcccttgaacatctcctgcatcatacccttg
ggcccatcctttcatcagcagtggatctatctcaaaacacaggctgtaaatgcattccgg
acagagttaactcttacggacaaggtcatccacactttgagtatcccacaagccacggtt
aaggacggcggcagctatgagtgctcggtcaggaatgaggccagtggaaaagccaaagcg
ggcagagtggctgtaactgtgttcgaggataactcctttttaaccctggatcctagaggg
attctgcagacagagtttgtcacaatttttgaagagacacagttcacaatctacattaat
gcatacccaactcctaaagtttcatggatgaaagatgaccaagcactaacagaggacttt
tacattttcacaaaaatgagtcgcattgaggggaatcggtatcagagcactataacattc
cgagtacctatggagaaggataatggaaattacacaataacagccataagtggcactcaa
actgctcacttctcatttattctcaaaatgacagctaccagacttgatatcagaccctcc
tccgccccccttctgcaaccagacctggaagaaatggttgttcccctccactcgtctttc
actttaacatgtcgtggaggcacaaaacttgtatgggacacaccattccatagggaggaa
caatcacaggtggaccgcggcgtttttgtctccaccataactgtggacatagcaacatta
atgcacactggttattacacttgccaatatagtggcaacatcacagaggaagccgaggca
agcagcatttacatctatgtaccagatccagactctcccttcctgccagcatacatatac
catctgccgcctgagcgaagtgatgttgagattccatgtagggtgtctgatcccggtgcc
atagtgacactggtcaatgttgacaccaaccaacctgtgccttgtatgtatgatagtaaa
cagggcgctttaggaacattttctgcaggaacttatgtatgcaaggccataataaatgga
gaggtgcacaccagtgaagagtacatcgtccaggattcaatagatatgttgcaagttaag
ctctatgccgaaagaactgctctgctcgttggagaaacaataactgtcaactgtctggct
caaggaccttacctactcgaagataactggaaataccctggcaaactggctaatcgtggt
acaaaaactgtacgagaaagcaggaaagatagagagattctgtacaccctgacgatccca
catgcctcaaccaaagacagcggcaactactcatgttccattactactgtggcgtctaga
gagacccagacaaaggaaatagctattcaagtttttgccggtgagtttttaacgatcaac
ccggactttcagcaccacgaatctgcaagactggatgaggtccgggagttaagcgctaca
atatcctcctttcccgatgcccatgttacttggttcaaggatggcattccactcaatgat
gtgaccgctgagttctccactaatctgcagaagacaagtgagacaagctacagaagcgtt
ctcaccctgatccgggtgagggaggaggacagtgggaactacaccctgcgagtggagaat
ggaaaccaaagccatgaagtcagcttacacctggtggttaaagtgccagcagtcattgtg
gatcttatggacctccaccatggttcagccacaggacaatcagcagtgtgcattaccagg
gggcaacccactcccgttgtagagtggttcatatgcaagaacattaaacaatgtgccaat
gacacgtcttcttgggcgcctctacccaccaactccacagagatcacgatggagtcgcac
ctggatgaaaagagcaatctggaggcccaagtgatgtttggtcatctggaaagcactctg
tcagtccgatgctttaccaagaatgaactgggtgtagatagcagggagatcaaactggtg
tccactggccctcaccctgagctgacggtagctgccgctgtgctggttctactggtcatt
gtcatcatctcactcattgtcttggttgttatctggaagcagaaaccacggtatgagatc
cgctggagggtcatagaatctgtgagtccggacggccatgagtacatctatgtagatccc
atgcagcttccctacgactccagatgggaatttccccgagatagacttgtgcttggtcgg
atcctgggctctggagcctttggaaaggtggttgaaggcaccgcctatggactcagctgt
tctcagcctgtaatgaaggtggcagtgaaaatgctgaaacccacagctcgctccagtgaa
aagcaggctctgatgtctgaactgaagatcatgactcaccttggaccccatctcaacatt
gtaaaccttttgggagcatgcaccaagtcaggccctatctacattatcactgagtactgc
ttccatggtgacctggtcaactatctacacaagaacagggagagcttcctcagcttgagt
cctgagaaaaacaagaaggagctggatatctttgggatcaatcctgcagatgagaacagc
aggagttatgtgattctgtcctttgagagcagaggagactacatggatatgaaacaggca
gacaacactcagtatgtaccaatgctggagatgagcacaaactccaagtacacagacatc
catggtccgaactacgaccaccctccatcacagaaaggctctggcgaatctgagatggac
aacctgctgtcggatgacacgagtgaaggtctcaccaccaccgacctgcttagttttacc
taccaggtggccaaaggaatggagtttcttgcttccaaaaattgtgtgcatcgggatctc
gcagccaggaacgtccttctctctcagggcaaaattgtcaagatctgtgactttgggctg
gccagagacatcatgcatgacaacaactatgtctctaaaggaagcacctttttgccagtg
aagtggatggcaccagaaagtatttttgacaacttatacaccagtcttagtgatgtttgg
tcatacggcatactcctctgggagatcttcacccttggtggcacaccgtaccctgggatg
gtggtagactccagtttctacaacaagatcaagagcggataccgaatgtcaaagcctgaa
catgcacctcaagatgtgtatgagatgatgatgaagtgctggaacagcgagccagagaaa
aggccttccttcatgggtctgagtgagaatatggcgtctttgctgccctccagctacaag
agacattacgagaaagtgaaccttgagttcctgaagagtgaccaccctgctgtcaccaga
gtatgcatggagactgactcaggctacgttgacataccgtacaagaaccagggcaagcta
aaggacagggaaagcggcttcgacgaacagcgactgagctcagacagtggctacattatt
cccctccccgatctggaccctatatccgatgacgagtatggaaaaaggaacagacacagc
tctcaaacatctgaggagagcgcaattgagactggctcaagtagctccacttatgctaag
cgtgagggtgagagcctggaggacatcactctgctggacgagatgtgtctggactgtaac
gatctggtggaggacagctttctgtga
DBGET
integrated database retrieval system
